RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 TMCC3Q9ULS5 477 aa9.44□□□□□ -0.9
RPAIN-204ENST00000405578 A4GNTQ9UNA3 340 aa9.44□□□□□ -0.9
RPAIN-204ENST00000405578 MED31Q9Y3C7 131 aa9.44□□□□□ -0.9
RPAIN-204ENST00000405578 A0A1W2PRQ8 180 aa9.43□□□□□ -0.9
RPAIN-204ENST00000405578 NKX2-6A6NCS4 301 aa9.43□□□□□ -0.9
RPAIN-204ENST00000405578 HSPB2A8KAH6 182 aa9.43□□□□□ -0.9
RPAIN-204ENST00000405578 MT-ATP6P00846 226 aa9.43□□□□□ -0.9
RPAIN-204ENST00000405578 SEMG1P04279 462 aa9.43□□□□□ -0.9
RPAIN-204ENST00000405578 HIST1H2ABP04908 130 aa9.43□□□□□ -0.9
RPAIN-204ENST00000405578 SHC1P29353 583 aa9.43□□□□□ -0.9
RPAIN-204ENST00000405578 TIMP3P35625 211 aa9.43□□□□□ -0.9
RPAIN-204ENST00000405578 IFNGR2P38484 337 aa9.43□□□□□ -0.9
RPAIN-204ENST00000405578 SPIBQ01892 262 aa9.43□□□□□ -0.9
RPAIN-204ENST00000405578 PMPCAQ10713 525 aa9.43□□□□□ -0.9
RPAIN-204ENST00000405578 DGCR6Q14129 220 aa9.43□□□□□ -0.9
RPAIN-204ENST00000405578 RNPS1Q15287 305 aaKnown RBP9.43□□□□□ -0.9
RPAIN-204ENST00000405578 OR7A5Q15622 319 aa9.43□□□□□ -0.9
RPAIN-204ENST00000405578 HSPB2Q16082 182 aa9.43□□□□□ -0.9
RPAIN-204ENST00000405578 ZNF239Q16600 458 aaKnown RBP9.43□□□□□ -0.9
RPAIN-204ENST00000405578 ZNF730Q6ZMV8 503 aa9.43□□□□□ -0.9
RPAIN-204ENST00000405578 HIST3H2AQ7L7L0 130 aa9.43□□□□□ -0.9
RPAIN-204ENST00000405578 DMRTC2Q8IXT2 367 aaPredicted RBP9.43□□□□□ -0.9
RPAIN-204ENST00000405578 RNF113BQ8IZP6 322 aaKnown RBP9.43□□□□□ -0.9
RPAIN-204ENST00000405578 OR6S1Q8NH40 331 aa9.43□□□□□ -0.9
RPAIN-204ENST00000405578 MFSD8Q8NHS3 518 aa9.43□□□□□ -0.9
RPAIN-204ENST00000405578 HIST1H2ACQ93077 130 aa9.43□□□□□ -0.9
RPAIN-204ENST00000405578 SLC25A36Q96CQ1 311 aa9.43□□□□□ -0.9
RPAIN-204ENST00000405578 ZNF845Q96IR2 970 aaPredicted RBP9.43□□□□□ -0.9
RPAIN-204ENST00000405578 ARL5BQ96KC2 179 aa9.43□□□□□ -0.9
RPAIN-204ENST00000405578 TACO1Q9BSH4 297 aaKnown RBP9.43□□□□□ -0.9
RPAIN-204ENST00000405578 CHID1Q9BWS9 393 aa9.43□□□□□ -0.9
RPAIN-204ENST00000405578 ASPNQ9BXN1 380 aa9.43□□□□□ -0.9
RPAIN-204ENST00000405578 LIME1Q9H400 295 aa9.43□□□□□ -0.9
RPAIN-204ENST00000405578 GLRX2Q9NS18 164 aa9.43□□□□□ -0.9
RPAIN-204ENST00000405578 RHCGQ9UBD6 479 aa9.43□□□□□ -0.9
RPAIN-204ENST00000405578 CLCF1Q9UBD9 225 aa9.43□□□□□ -0.9
RPAIN-204ENST00000405578 KCNN3Q9UGI6 736 aa9.43□□□□□ -0.9
RPAIN-204ENST00000405578 ST6GALNAC2Q9UJ37 374 aa9.43□□□□□ -0.9
RPAIN-204ENST00000405578 CORINQ9Y5Q5 1042 aa9.43□□□□□ -0.9
RPAIN-204ENST00000405578 STAB1Q9NY15 2570 aa9.43□□□□□ -0.9
RPAIN-204ENST00000405578 EXPH5Q8NEV8 1989 aa9.43□□□□□ -0.9
RPAIN-204ENST00000405578 DNAJC13O75165 2243 aa9.42□□□□□ -0.9
RPAIN-204ENST00000405578 TCRBV3S1A0A5B6 114 aa9.42□□□□□ -0.9
RPAIN-204ENST00000405578 ZC3H12DA2A288 527 aaKnown RBP9.42□□□□□ -0.9
RPAIN-204ENST00000405578 MBD3L4A6NDZ8 208 aaPredicted RBP9.42□□□□□ -0.9
RPAIN-204ENST00000405578 MBD3L3A6NE82 208 aaPredicted RBP9.42□□□□□ -0.9
RPAIN-204ENST00000405578 MBD3L5A6NJ08 208 aaPredicted RBP9.42□□□□□ -0.9
RPAIN-204ENST00000405578 LIPT2A6NK58 231 aa9.42□□□□□ -0.9
RPAIN-204ENST00000405578 J3KTA2 159 aa9.42□□□□□ -0.9
RPAIN-204ENST00000405578 KPNA4O00629 521 aaPredicted RBP9.42□□□□□ -0.9
RPAIN-204ENST00000405578 GNGT2O14610 69 aa9.42□□□□□ -0.9
RPAIN-204ENST00000405578 NPIPB7O75200 414 aa9.42□□□□□ -0.9
RPAIN-204ENST00000405578 VAMP5O95183 116 aa9.42□□□□□ -0.9
RPAIN-204ENST00000405578 GADD45GO95257 159 aa9.42□□□□□ -0.9
RPAIN-204ENST00000405578 CRHP06850 196 aa9.42□□□□□ -0.9
RPAIN-204ENST00000405578 GLI4P10075 376 aa9.42□□□□□ -0.9
RPAIN-204ENST00000405578 NQO1P15559 274 aaKnown RBP9.42□□□□□ -0.9
RPAIN-204ENST00000405578 FPR1P21462 350 aa9.42□□□□□ -0.9
RPAIN-204ENST00000405578 MAGEA2P43356 314 aa9.42□□□□□ -0.9
RPAIN-204ENST00000405578 RPS5P46782 204 aaKnown RBP9.42□□□□□ -0.9
RPAIN-204ENST00000405578 AGFG1P52594 562 aaKnown RBP9.42□□□□□ -0.9
RPAIN-204ENST00000405578 CTBP2P56545 445 aa9.42□□□□□ -0.9
RPAIN-204ENST00000405578 ADAM8P78325 824 aa9.42□□□□□ -0.9
RPAIN-204ENST00000405578 GK3PQ14409 553 aa9.42□□□□□ -0.9
RPAIN-204ENST00000405578 TAF11Q15544 211 aa9.42□□□□□ -0.9
RPAIN-204ENST00000405578 RIPPLY2Q5TAB7 128 aa9.42□□□□□ -0.9
RPAIN-204ENST00000405578 PAQR6Q6TCH4 344 aa9.42□□□□□ -0.9
RPAIN-204ENST00000405578 LINC00114Q6XXX2 140 aa9.42□□□□□ -0.9
RPAIN-204ENST00000405578 FCRLAQ7L513 359 aa9.42□□□□□ -0.9
RPAIN-204ENST00000405578 CXXC5Q7LFL8 322 aaKnown RBP9.42□□□□□ -0.9
RPAIN-204ENST00000405578 ADGRE4PQ86SQ3 457 aa9.42□□□□□ -0.9
RPAIN-204ENST00000405578 ADGRG5Q8IZF4 528 aa9.42□□□□□ -0.9
RPAIN-204ENST00000405578 SPATA3Q8NHX4 192 aa9.42□□□□□ -0.9
RPAIN-204ENST00000405578 MBD3L2Q8NHZ7 208 aaPredicted RBP9.42□□□□□ -0.9
RPAIN-204ENST00000405578 FNDC9Q8TBE3 224 aa9.42□□□□□ -0.9
RPAIN-204ENST00000405578 PIGXQ8TBF5 258 aa9.42□□□□□ -0.9
RPAIN-204ENST00000405578 CANT1Q8WVQ1 401 aa9.42□□□□□ -0.9
RPAIN-204ENST00000405578 ASB5Q8WWX0 329 aa9.42□□□□□ -0.9
RPAIN-204ENST00000405578 ACOT11Q8WXI4 607 aaPredicted RBP9.42□□□□□ -0.9
RPAIN-204ENST00000405578 KTI12Q96EK9 354 aaPredicted RBP9.42□□□□□ -0.9
RPAIN-204ENST00000405578 ZNF426Q9BUY5 554 aa9.42□□□□□ -0.9
RPAIN-204ENST00000405578 COQ10BQ9H8M1 238 aa9.42□□□□□ -0.9
RPAIN-204ENST00000405578 REEP1Q9H902 201 aa9.42□□□□□ -0.9
RPAIN-204ENST00000405578 GP6Q9HCN6 339 aa9.42□□□□□ -0.9
RPAIN-204ENST00000405578 EMC3Q9P0I2 261 aa9.42□□□□□ -0.9
RPAIN-204ENST00000405578 KLHL9Q9P2J3 617 aa9.42□□□□□ -0.9
RPAIN-204ENST00000405578 TMEM5Q9Y2B1 443 aa9.42□□□□□ -0.9
RPAIN-204ENST00000405578 PLEKHA6Q9Y2H5 1048 aa9.42□□□□□ -0.9
RPAIN-204ENST00000405578 TESMINQ9Y4I5 508 aa9.42□□□□□ -0.9
RPAIN-204ENST00000405578 FAM215AQ9Y5M1 114 aa9.42□□□□□ -0.9
RPAIN-204ENST00000405578 NINQ8N4C6 2090 aa9.42□□□□□ -0.9
RPAIN-204ENST00000405578 IGKV1D-42A0A075B6H8 117 aa9.41□□□□□ -0.9
RPAIN-204ENST00000405578 ERICH4A6NGS2 130 aa9.41□□□□□ -0.9
RPAIN-204ENST00000405578 GPR171O14626 319 aa9.41□□□□□ -0.9
RPAIN-204ENST00000405578 FFAR1O14842 300 aa9.41□□□□□ -0.9
RPAIN-204ENST00000405578 DIRAS1O95057 198 aa9.41□□□□□ -0.9
RPAIN-204ENST00000405578 PRSS23O95084 383 aa9.41□□□□□ -0.9
RPAIN-204ENST00000405578 RCBTB2O95199 551 aa9.41□□□□□ -0.9
RPAIN-204ENST00000405578 OR6A2O95222 327 aa9.41□□□□□ -0.9
RPAIN-204ENST00000405578 LYPD3O95274 346 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 109.6 ms