RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 PRICKLE4Q2TBC4 344 aa11.62□□□□□ -0.55
PPP4R1-202ENST00000400555 C1orf53Q5VUE5 145 aa11.62□□□□□ -0.55
PPP4R1-202ENST00000400555 LRRC69Q6ZNQ3 347 aa11.62□□□□□ -0.55
PPP4R1-202ENST00000400555 RNF113BQ8IZP6 322 aaKnown RBP11.62□□□□□ -0.55
PPP4R1-202ENST00000400555 CA13Q8N1Q1 262 aa11.62□□□□□ -0.55
PPP4R1-202ENST00000400555 FGF11Q92914 225 aa11.62□□□□□ -0.55
PPP4R1-202ENST00000400555 DDOQ99489 341 aa11.62□□□□□ -0.55
PPP4R1-202ENST00000400555 SLC38A3Q99624 504 aa11.62□□□□□ -0.55
PPP4R1-202ENST00000400555 KCNK15Q9H427 330 aa11.62□□□□□ -0.55
PPP4R1-202ENST00000400555 LAMP5Q9UJQ1 280 aa11.62□□□□□ -0.55
PPP4R1-202ENST00000400555 FXYD6-FXYD2A0A087WZ82 144 aa11.62□□□□□ -0.55
PPP4R1-202ENST00000400555 ICMTO60725 284 aa11.62□□□□□ -0.55
PPP4R1-202ENST00000400555 GALR3O60755 368 aaPredicted RBP11.62□□□□□ -0.55
PPP4R1-202ENST00000400555 CBX7O95931 251 aa11.62□□□□□ -0.55
PPP4R1-202ENST00000400555 TRAPPC2P0DI81 140 aa11.62□□□□□ -0.55
PPP4R1-202ENST00000400555 TRAPPC2BP0DI82 140 aa11.62□□□□□ -0.55
PPP4R1-202ENST00000400555 SRMP19623 302 aa11.62□□□□□ -0.55
PPP4R1-202ENST00000400555 KIR2DL1P43626 348 aaPredicted RBP11.62□□□□□ -0.55
PPP4R1-202ENST00000400555 EIF1AXP47813 144 aaKnown RBP11.62□□□□□ -0.55
PPP4R1-202ENST00000400555 ACTC1P68032 377 aa11.62□□□□□ -0.55
PPP4R1-202ENST00000400555 ACTA1P68133 377 aa11.62□□□□□ -0.55
PPP4R1-202ENST00000400555 DLX2Q07687 328 aaPredicted RBP11.62□□□□□ -0.55
PPP4R1-202ENST00000400555 ULK3Q6PHR2 472 aa11.62□□□□□ -0.55
PPP4R1-202ENST00000400555 TMED4Q7Z7H5 227 aa11.62□□□□□ -0.55
PPP4R1-202ENST00000400555 TCTE3Q8IZS6 198 aa11.62□□□□□ -0.55
PPP4R1-202ENST00000400555 OR11H4Q8NGC9 324 aa11.62□□□□□ -0.55
PPP4R1-202ENST00000400555 KISS1RQ969F8 398 aaPredicted RBP11.62□□□□□ -0.55
PPP4R1-202ENST00000400555 S100A16Q96FQ6 103 aaKnown RBP11.62□□□□□ -0.55
PPP4R1-202ENST00000400555 ALG12Q9BV10 488 aa11.62□□□□□ -0.55
PPP4R1-202ENST00000400555 FXYD6Q9H0Q3 95 aa11.62□□□□□ -0.55
PPP4R1-202ENST00000400555 GRHPRQ9UBQ7 328 aa11.62□□□□□ -0.55
PPP4R1-202ENST00000400555 C2orf72A6NCS6 295 aa11.61□□□□□ -0.55
PPP4R1-202ENST00000400555 EIF1AYO14602 144 aaKnown RBP11.61□□□□□ -0.55
PPP4R1-202ENST00000400555 CDC40O60508 579 aaKnown RBP eCLIP11.61□□□□□ -0.55
PPP4R1-202ENST00000400555 CRYZL1O95825 349 aa11.61□□□□□ -0.55
PPP4R1-202ENST00000400555 OPN1LWP04000 364 aa11.61□□□□□ -0.55
PPP4R1-202ENST00000400555 THBS1P07996 1170 aa11.61□□□□□ -0.55
PPP4R1-202ENST00000400555 PSG6Q00889 435 aa11.61□□□□□ -0.55
PPP4R1-202ENST00000400555 CBLN3Q6UW01 205 aa11.61□□□□□ -0.55
PPP4R1-202ENST00000400555 TMEM92Q6UXU6 159 aa11.61□□□□□ -0.55
PPP4R1-202ENST00000400555 TTLL10Q6ZVT0 673 aa11.61□□□□□ -0.55
PPP4R1-202ENST00000400555 DVL3Q92997 716 aaPredicted RBP11.61□□□□□ -0.55
PPP4R1-202ENST00000400555 ZNF649Q9BS31 505 aa11.61□□□□□ -0.55
PPP4R1-202ENST00000400555 ZNF223Q9UK11 482 aaPredicted RBP11.61□□□□□ -0.55
PPP4R1-202ENST00000400555 YBX2Q9Y2T7 364 aaKnown RBP11.61□□□□□ -0.55
PPP4R1-202ENST00000400555 ABCA7Q8IZY2 2146 aa11.61□□□□□ -0.55
PPP4R1-202ENST00000400555 LAMA1P25391 3075 aa11.61□□□□□ -0.55
PPP4R1-202ENST00000400555 HEATR5AQ86XA9 2040 aa11.61□□□□□ -0.55
PPP4R1-202ENST00000400555 NUPL2O15504 423 aaKnown RBP11.61□□□□□ -0.55
PPP4R1-202ENST00000400555 DCTDP32321 178 aa11.61□□□□□ -0.55
PPP4R1-202ENST00000400555 CTHP32929 405 aa11.61□□□□□ -0.55
PPP4R1-202ENST00000400555 ZNF613Q6PF04 617 aa11.61□□□□□ -0.55
PPP4R1-202ENST00000400555 LSM14AQ8ND56 463 aaKnown RBP11.61□□□□□ -0.55
PPP4R1-202ENST00000400555 OR52B4Q8NGK2 314 aa11.61□□□□□ -0.55
PPP4R1-202ENST00000400555 YIPF5Q969M3 257 aa11.61□□□□□ -0.55
PPP4R1-202ENST00000400555 RDH8Q9NYR8 311 aa11.61□□□□□ -0.55
PPP4R1-202ENST00000400555 A0A0J9YY10 115 aa11.61□□□□□ -0.55
PPP4R1-202ENST00000400555 PLPP2O43688 288 aa11.61□□□□□ -0.55
PPP4R1-202ENST00000400555 SEMA4FO95754 770 aa11.61□□□□□ -0.55
PPP4R1-202ENST00000400555 RNH1P13489 461 aaKnown RBP11.61□□□□□ -0.55
PPP4R1-202ENST00000400555 LCN1P31025 176 aa11.61□□□□□ -0.55
PPP4R1-202ENST00000400555 PSMA6P60900 246 aaKnown RBP11.61□□□□□ -0.55
PPP4R1-202ENST00000400555 SHHQ15465 462 aa11.61□□□□□ -0.55
PPP4R1-202ENST00000400555 C1orf189Q5VU69 101 aa11.61□□□□□ -0.55
PPP4R1-202ENST00000400555 NKAIN2Q5VXU1 208 aa11.61□□□□□ -0.55
PPP4R1-202ENST00000400555 HLA-DQA1Q5Y7H0 255 aa11.61□□□□□ -0.55
PPP4R1-202ENST00000400555 RPL13AP3Q6NVV1 102 aa11.61□□□□□ -0.55
PPP4R1-202ENST00000400555 CCDC28AQ8IWP9 274 aa11.61□□□□□ -0.55
PPP4R1-202ENST00000400555 FAM181AQ8N9Y4 354 aa11.61□□□□□ -0.55
PPP4R1-202ENST00000400555 TOR1AIP2Q8NFQ8 470 aa11.61□□□□□ -0.55
PPP4R1-202ENST00000400555 TNFAIP8L1Q8WVP5 186 aa11.61□□□□□ -0.55
PPP4R1-202ENST00000400555 FCAMRQ8WWV6 532 aa11.61□□□□□ -0.55
PPP4R1-202ENST00000400555 SLC7A5P2Q9GIP4 190 aa11.61□□□□□ -0.55
PPP4R1-202ENST00000400555 SYT4Q9H2B2 425 aa11.61□□□□□ -0.55
PPP4R1-202ENST00000400555 NIPAL2Q9H841 368 aa11.61□□□□□ -0.55
PPP4R1-202ENST00000400555 TSPAN4O14817 238 aa11.61□□□□□ -0.55
PPP4R1-202ENST00000400555 KLF4O43474 513 aa11.61□□□□□ -0.55
PPP4R1-202ENST00000400555 SPI1P17947 270 aa11.61□□□□□ -0.55
PPP4R1-202ENST00000400555 RAD52P43351 418 aa11.61□□□□□ -0.55
PPP4R1-202ENST00000400555 CDK5R1Q15078 307 aa11.61□□□□□ -0.55
PPP4R1-202ENST00000400555 ZNF627Q7L945 461 aa11.61□□□□□ -0.55
PPP4R1-202ENST00000400555 OR2T4Q8NH00 348 aa11.61□□□□□ -0.55
PPP4R1-202ENST00000400555 C16orf52Q8NHV5 167 aa11.61□□□□□ -0.55
PPP4R1-202ENST00000400555 COQ8AQ8NI60 647 aa11.61□□□□□ -0.55
PPP4R1-202ENST00000400555 ELMOD3Q96FG2 381 aa11.61□□□□□ -0.55
PPP4R1-202ENST00000400555 ZNF106Q9H2Y7 1883 aaKnown RBP11.6□□□□□ -0.55
PPP4R1-202ENST00000400555 A0A0B4J2E0 115 aa11.6□□□□□ -0.55
PPP4R1-202ENST00000400555 A0A1B0GX12 115 aa11.6□□□□□ -0.55
PPP4R1-202ENST00000400555 A0A1W2PQF6 199 aa11.6□□□□□ -0.55
PPP4R1-202ENST00000400555 ZFPL1O95159 310 aa11.6□□□□□ -0.55
PPP4R1-202ENST00000400555 UBL3O95164 117 aa11.6□□□□□ -0.55
PPP4R1-202ENST00000400555 SPARCP09486 303 aa11.6□□□□□ -0.55
PPP4R1-202ENST00000400555 CCKBRP32239 447 aa11.6□□□□□ -0.55
PPP4R1-202ENST00000400555 TSFMP43897 325 aaKnown RBP11.6□□□□□ -0.55
PPP4R1-202ENST00000400555 FZD5Q13467 585 aa11.6□□□□□ -0.55
PPP4R1-202ENST00000400555 ATXN7L3Q14CW9 347 aaPredicted RBP11.6□□□□□ -0.55
PPP4R1-202ENST00000400555 LRRC37A5PQ49AS3 106 aa11.6□□□□□ -0.55
PPP4R1-202ENST00000400555 ALG10Q5BKT4 473 aa11.6□□□□□ -0.55
PPP4R1-202ENST00000400555 LIPNQ5VXI9 398 aa11.6□□□□□ -0.55
PPP4R1-202ENST00000400555 LAMTOR1Q6IAA8 161 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms