RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 ZADH2Q8N4Q0 377 aa12.78□□□□□ -0.36
VAPA-202ENST00000400000 TAZQ16635 292 aa12.78□□□□□ -0.36
VAPA-202ENST00000400000 ZNF718Q3SXZ3 478 aa12.78□□□□□ -0.36
VAPA-202ENST00000400000 COX20Q5RI15 118 aa12.78□□□□□ -0.36
VAPA-202ENST00000400000 B3GNT8Q7Z7M8 397 aa12.78□□□□□ -0.36
VAPA-202ENST00000400000 RASD2Q96D21 266 aa12.78□□□□□ -0.36
VAPA-202ENST00000400000 C1QTNF2Q9BXJ5 285 aa12.78□□□□□ -0.36
VAPA-202ENST00000400000 NOX3Q9HBY0 568 aa12.78□□□□□ -0.36
VAPA-202ENST00000400000 TAS2R8Q9NYW2 309 aa12.78□□□□□ -0.36
VAPA-202ENST00000400000 ZNF264O43296 627 aa12.77□□□□□ -0.36
VAPA-202ENST00000400000 TXNL1O43396 289 aa12.77□□□□□ -0.36
VAPA-202ENST00000400000 SRPX2O60687 465 aaPredicted RBP12.77□□□□□ -0.36
VAPA-202ENST00000400000 P2RX1P51575 399 aa12.77□□□□□ -0.36
VAPA-202ENST00000400000 F2RL1P55085 397 aa12.77□□□□□ -0.36
VAPA-202ENST00000400000 CLINT1Q14677 625 aa12.77□□□□□ -0.36
VAPA-202ENST00000400000 SF3B4Q15427 424 aaKnown RBP eCLIP12.77□□□□□ -0.366e-8■■□□□ 12.7
VAPA-202ENST00000400000 PM20D2Q8IYS1 436 aa12.77□□□□□ -0.36
VAPA-202ENST00000400000 OR5K2Q8NHB8 316 aa12.77□□□□□ -0.36
VAPA-202ENST00000400000 TMEM255BQ8WV15 326 aa12.77□□□□□ -0.36
VAPA-202ENST00000400000 TRIB1Q96RU8 372 aa12.77□□□□□ -0.36
VAPA-202ENST00000400000 ZC3H12DA2A288 527 aaKnown RBP12.77□□□□□ -0.36
VAPA-202ENST00000400000 LINC01565O15544 149 aa12.77□□□□□ -0.36
VAPA-202ENST00000400000 YIF1AO95070 293 aa12.77□□□□□ -0.36
VAPA-202ENST00000400000 ENPP1P22413 925 aa12.77□□□□□ -0.36
VAPA-202ENST00000400000 FECHP22830 423 aa12.77□□□□□ -0.36
VAPA-202ENST00000400000 MYF6P23409 242 aa12.77□□□□□ -0.36
VAPA-202ENST00000400000 NFATC3Q12968 1075 aa12.77□□□□□ -0.36
VAPA-202ENST00000400000 SEMA3BQ13214 749 aa12.77□□□□□ -0.36
VAPA-202ENST00000400000 EBPQ15125 230 aaKnown RBP12.77□□□□□ -0.36
VAPA-202ENST00000400000 SLC5A12Q1EHB4 618 aa12.77□□□□□ -0.36
VAPA-202ENST00000400000 LCN8Q6JVE9 175 aa12.77□□□□□ -0.36
VAPA-202ENST00000400000 PRKYO43930 277 aa12.77□□□□□ -0.37
VAPA-202ENST00000400000 OR10J4P0C629 311 aa12.77□□□□□ -0.37
VAPA-202ENST00000400000 GLI4P10075 376 aa12.77□□□□□ -0.37
VAPA-202ENST00000400000 SERPINF1P36955 418 aa12.77□□□□□ -0.37
VAPA-202ENST00000400000 ZNF420Q8TAQ5 688 aaPredicted RBP12.77□□□□□ -0.37
VAPA-202ENST00000400000 RBMXL1Q96E39 390 aaKnown RBP12.77□□□□□ -0.37
VAPA-202ENST00000400000 TMEM9Q9P0T7 183 aa12.77□□□□□ -0.37
VAPA-202ENST00000400000 LHX3Q9UBR4 397 aa12.77□□□□□ -0.37
VAPA-202ENST00000400000 A0A096LPE4 126 aa12.77□□□□□ -0.37
VAPA-202ENST00000400000 A0A1W2PPZ6 126 aa12.77□□□□□ -0.37
VAPA-202ENST00000400000 AKR7A3O95154 331 aa12.77□□□□□ -0.37
VAPA-202ENST00000400000 SIX1Q15475 284 aaPredicted RBP12.77□□□□□ -0.37
VAPA-202ENST00000400000 ADPRMQ3LIE5 342 aa12.77□□□□□ -0.37
VAPA-202ENST00000400000 CCSMST1Q4G0I0 132 aa12.77□□□□□ -0.37
VAPA-202ENST00000400000 ZNF417Q8TAU3 575 aa12.77□□□□□ -0.37
VAPA-202ENST00000400000 NAT6Q93015 286 aa12.77□□□□□ -0.37
VAPA-202ENST00000400000 SORCS2Q96PQ0 1159 aa12.77□□□□□ -0.37
VAPA-202ENST00000400000 A3GALT2U3KPV4 340 aa12.77□□□□□ -0.37
VAPA-202ENST00000400000 MYO18AQ92614 2054 aaKnown RBP12.77□□□□□ -0.37
VAPA-202ENST00000400000 PROZP22891 400 aa12.77□□□□□ -0.37
VAPA-202ENST00000400000 KCNJ10P78508 379 aa12.77□□□□□ -0.37
VAPA-202ENST00000400000 PFN4Q8NHR9 129 aa12.77□□□□□ -0.37
VAPA-202ENST00000400000 DOT1LQ8TEK3 1739 aa12.77□□□□□ -0.37
VAPA-202ENST00000400000 MFFQ9GZY8 342 aa12.77□□□□□ -0.37
VAPA-202ENST00000400000 METTL9Q9H1A3 318 aa12.77□□□□□ -0.37
VAPA-202ENST00000400000 ZNF891A8MT65 544 aaPredicted RBP12.76□□□□□ -0.37
VAPA-202ENST00000400000 M0R1B8 84 aa12.76□□□□□ -0.37
VAPA-202ENST00000400000 GPX3P22352 226 aa12.76□□□□□ -0.37
VAPA-202ENST00000400000 BPIFB2Q8N4F0 458 aa12.76□□□□□ -0.37
VAPA-202ENST00000400000 ZFP90Q8TF47 636 aa12.76□□□□□ -0.37
VAPA-202ENST00000400000 LRFN5Q96NI6 719 aa12.76□□□□□ -0.37
VAPA-202ENST00000400000 ATP23Q9Y6H3 246 aa12.76□□□□□ -0.37
VAPA-202ENST00000400000 ARL16Q0P5N6 197 aa12.76□□□□□ -0.37
VAPA-202ENST00000400000 ARHGAP11BQ3KRB8 267 aa12.76□□□□□ -0.37
VAPA-202ENST00000400000 HIST2H3PS2Q5TEC6 136 aa12.76□□□□□ -0.37
VAPA-202ENST00000400000 GIMAP1Q8WWP7 306 aa12.76□□□□□ -0.37
VAPA-202ENST00000400000 SNAPC3Q92966 411 aa12.76□□□□□ -0.37
VAPA-202ENST00000400000 INTS12Q96CB8 462 aaKnown RBP12.76□□□□□ -0.37
VAPA-202ENST00000400000 SLC41A2Q96JW4 573 aa12.76□□□□□ -0.37
VAPA-202ENST00000400000 WDR76Q9H967 626 aa12.76□□□□□ -0.37
VAPA-202ENST00000400000 STEAP1Q9UHE8 339 aa12.76□□□□□ -0.37
VAPA-202ENST00000400000 FBXL2Q9UKC9 423 aa12.76□□□□□ -0.37
VAPA-202ENST00000400000 CNOT11Q9UKZ1 510 aaKnown RBP12.76□□□□□ -0.37
VAPA-202ENST00000400000 RCE1Q9Y256 329 aa12.76□□□□□ -0.37
VAPA-202ENST00000400000 CRYM-AS1A6NIL9 109 aa12.76□□□□□ -0.37
VAPA-202ENST00000400000 M0QYG6 137 aa12.76□□□□□ -0.37
VAPA-202ENST00000400000 GABRA4P48169 554 aa12.76□□□□□ -0.37
VAPA-202ENST00000400000 ATPAF1Q5TC12 328 aaPredicted RBP12.76□□□□□ -0.37
VAPA-202ENST00000400000 PLAG1Q6DJT9 500 aa12.76□□□□□ -0.37
VAPA-202ENST00000400000 MUL1Q969V5 352 aa12.76□□□□□ -0.37
VAPA-202ENST00000400000 FGGYQ96C11 551 aa12.76□□□□□ -0.37
VAPA-202ENST00000400000 OCSTAMPQ9BR26 566 aa12.76□□□□□ -0.37
VAPA-202ENST00000400000 C19orf12Q9NSK7 152 aa12.76□□□□□ -0.37
VAPA-202ENST00000400000 ZNF487B1APH4 448 aa12.76□□□□□ -0.37
VAPA-202ENST00000400000 E7ESA3 106 aa12.76□□□□□ -0.37
VAPA-202ENST00000400000 SELENOFO60613 162 aa12.76□□□□□ -0.37
VAPA-202ENST00000400000 SNNO75324 88 aaPredicted RBP12.76□□□□□ -0.37
VAPA-202ENST00000400000 PRLHRP49683 370 aa12.76□□□□□ -0.37
VAPA-202ENST00000400000 C14orf28Q4W4Y0 310 aa12.76□□□□□ -0.37
VAPA-202ENST00000400000 ANKRD16Q6P6B7 361 aa12.76□□□□□ -0.37
VAPA-202ENST00000400000 LYPD4Q6UWN0 246 aa12.76□□□□□ -0.37
VAPA-202ENST00000400000 ABHD4Q8TB40 342 aa12.76□□□□□ -0.37
VAPA-202ENST00000400000 PHOSPHO2Q8TCD6 241 aa12.76□□□□□ -0.37
VAPA-202ENST00000400000 CCDC74AQ96AQ1 378 aa12.76□□□□□ -0.37
VAPA-202ENST00000400000 PDXPQ96GD0 296 aa12.76□□□□□ -0.37
VAPA-202ENST00000400000 C6orf106Q9H6K1 298 aaPredicted RBP12.76□□□□□ -0.37
VAPA-202ENST00000400000 MTCH1Q9NZJ7 389 aa12.76□□□□□ -0.37
VAPA-202ENST00000400000 GPR160Q9UJ42 338 aa12.76□□□□□ -0.37
VAPA-202ENST00000400000 TRGV8A0A0C4DH27 118 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms