RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 SSX6Q7RTT6 188 aa4.55□□□□□ -1.68
SMAD4-202ENST00000398417 ENKD1Q9H0I2 346 aa4.55□□□□□ -1.68
SMAD4-202ENST00000398417 AUNIPQ9H7T9 357 aa4.55□□□□□ -1.68
SMAD4-202ENST00000398417 GRHPRQ9UBQ7 328 aa4.55□□□□□ -1.68
SMAD4-202ENST00000398417 SF3B6Q9Y3B4 125 aaKnown RBP4.55□□□□□ -1.68
SMAD4-202ENST00000398417 FXYD6-FXYD2A0A087WZ82 144 aa4.55□□□□□ -1.68
SMAD4-202ENST00000398417 EIF1AYO14602 144 aaKnown RBP4.55□□□□□ -1.68
SMAD4-202ENST00000398417 SDC3O75056 442 aa4.55□□□□□ -1.68
SMAD4-202ENST00000398417 RENP00797 406 aa4.55□□□□□ -1.68
SMAD4-202ENST00000398417 CSN2P05814 226 aa4.55□□□□□ -1.68
SMAD4-202ENST00000398417 CELA2BP08218 269 aaPredicted RBP4.55□□□□□ -1.68
SMAD4-202ENST00000398417 ZGLP1P0C6A0 271 aa4.55□□□□□ -1.68
SMAD4-202ENST00000398417 THSD4Q6ZMP0 1018 aa4.55□□□□□ -1.68
SMAD4-202ENST00000398417 OR5M3Q8NGP4 307 aa4.55□□□□□ -1.68
SMAD4-202ENST00000398417 OR14A2Q96R54 314 aa4.55□□□□□ -1.68
SMAD4-202ENST00000398417 SEC22CQ9BRL7 303 aa4.55□□□□□ -1.68
SMAD4-202ENST00000398417 NUDT9Q9BW91 350 aa4.55□□□□□ -1.68
SMAD4-202ENST00000398417 FXYD6Q9H0Q3 95 aa4.55□□□□□ -1.68
SMAD4-202ENST00000398417 CENPMQ9NSP4 180 aa4.55□□□□□ -1.68
SMAD4-202ENST00000398417 ATXN7L1Q9ULK2 861 aaPredicted RBP4.55□□□□□ -1.68
SMAD4-202ENST00000398417 IGKV1-8A0A0C4DH67 115 aa4.55□□□□□ -1.68
SMAD4-202ENST00000398417 TCRBP04435 133 aa4.55□□□□□ -1.68
SMAD4-202ENST00000398417 NAT1P18440 290 aa4.55□□□□□ -1.68
SMAD4-202ENST00000398417 DNASE1P24855 282 aa4.55□□□□□ -1.68
SMAD4-202ENST00000398417 GIFP27352 417 aa4.55□□□□□ -1.68
SMAD4-202ENST00000398417 EIF1AXP47813 144 aaKnown RBP4.55□□□□□ -1.68
SMAD4-202ENST00000398417 GDI2P50395 445 aaKnown RBP4.55□□□□□ -1.68
SMAD4-202ENST00000398417 RPL7L1Q6DKI1 246 aaKnown RBP4.55□□□□□ -1.68
SMAD4-202ENST00000398417 ZNF782Q6ZMW2 699 aaPredicted RBP4.55□□□□□ -1.68
SMAD4-202ENST00000398417 COMMD7Q86VX2 200 aa4.55□□□□□ -1.68
SMAD4-202ENST00000398417 TMEM151BQ8IW70 566 aa4.55□□□□□ -1.68
SMAD4-202ENST00000398417 AVL9Q8NBF6 648 aa4.55□□□□□ -1.68
SMAD4-202ENST00000398417 DNAJA4Q8WW22 397 aaPredicted RBP4.55□□□□□ -1.68
SMAD4-202ENST00000398417 CLCC1Q96S66 551 aa4.55□□□□□ -1.68
SMAD4-202ENST00000398417 MOB1AQ9H8S9 216 aa4.55□□□□□ -1.68
SMAD4-202ENST00000398417 ERVK-19Q9WJR5 959 aa4.55□□□□□ -1.68
SMAD4-202ENST00000398417 TPRP12270 2363 aaKnown RBP4.55□□□□□ -1.68
SMAD4-202ENST00000398417 TEX46H3BTG2 121 aa4.55□□□□□ -1.68
SMAD4-202ENST00000398417 L7N2F9 121 aa4.55□□□□□ -1.68
SMAD4-202ENST00000398417 CTSVO60911 334 aa4.55□□□□□ -1.68
SMAD4-202ENST00000398417 KCNJ13O60928 360 aa4.55□□□□□ -1.68
SMAD4-202ENST00000398417 CD81P60033 236 aa4.55□□□□□ -1.68
SMAD4-202ENST00000398417 HHEXQ03014 270 aa4.55□□□□□ -1.68
SMAD4-202ENST00000398417 CLPPQ16740 277 aaPredicted RBP4.55□□□□□ -1.68
SMAD4-202ENST00000398417 ZNF628Q5EBL2 1059 aa4.55□□□□□ -1.68
SMAD4-202ENST00000398417 FAAP20Q6NZ36 180 aa4.55□□□□□ -1.68
SMAD4-202ENST00000398417 ARHGAP11AQ6P4F7 1023 aa4.55□□□□□ -1.68
SMAD4-202ENST00000398417 TTLL10Q6ZVT0 673 aa4.55□□□□□ -1.68
SMAD4-202ENST00000398417 GALNTL5Q7Z4T8 443 aa4.55□□□□□ -1.68
SMAD4-202ENST00000398417 ADIPOR1Q96A54 375 aa4.55□□□□□ -1.68
SMAD4-202ENST00000398417 UPRTQ96BW1 309 aa4.55□□□□□ -1.68
SMAD4-202ENST00000398417 ANKRD19PQ9H560 264 aa4.55□□□□□ -1.68
SMAD4-202ENST00000398417 FLRT3Q9NZU0 649 aa4.55□□□□□ -1.68
SMAD4-202ENST00000398417 BAIAP2Q9UQB8 552 aa4.55□□□□□ -1.68
SMAD4-202ENST00000398417 KIAA2026Q5HYC2 2103 aa4.55□□□□□ -1.68
SMAD4-202ENST00000398417 MCIDASD6RGH6 385 aa4.54□□□□□ -1.68
SMAD4-202ENST00000398417 SIX6O95475 246 aa4.54□□□□□ -1.68
SMAD4-202ENST00000398417 FSTP19883 344 aa4.54□□□□□ -1.68
SMAD4-202ENST00000398417 ETV6P41212 452 aa4.54□□□□□ -1.68
SMAD4-202ENST00000398417 PPP1CAP62136 330 aa4.54□□□□□ -1.68
SMAD4-202ENST00000398417 KIR2DS3Q14952 304 aa4.54□□□□□ -1.68
SMAD4-202ENST00000398417 GLYR1Q49A26 553 aaPredicted RBP4.54□□□□□ -1.68
SMAD4-202ENST00000398417 MS4A15Q8N5U1 240 aa4.54□□□□□ -1.68
SMAD4-202ENST00000398417 CRISPLD2Q9H0B8 497 aa4.54□□□□□ -1.68
SMAD4-202ENST00000398417 ISYNA1Q9NPH2 558 aa4.54□□□□□ -1.68
SMAD4-202ENST00000398417 MED17Q9NVC6 651 aa4.54□□□□□ -1.68
SMAD4-202ENST00000398417 RBFOX1Q9NWB1 397 aaKnown RBP4.54□□□□□ -1.68
SMAD4-202ENST00000398417 KCNE5Q9UJ90 142 aa4.54□□□□□ -1.68
SMAD4-202ENST00000398417 ARFGEF3Q5TH69 2177 aa4.54□□□□□ -1.68
SMAD4-202ENST00000398417 LANCL1O43813 399 aa4.54□□□□□ -1.68
SMAD4-202ENST00000398417 AK1P00568 194 aa4.54□□□□□ -1.68
SMAD4-202ENST00000398417 THY1P04216 161 aa4.54□□□□□ -1.68
SMAD4-202ENST00000398417 RNH1P13489 461 aaKnown RBP4.54□□□□□ -1.68
SMAD4-202ENST00000398417 RORAP35398 523 aa4.54□□□□□ -1.68
SMAD4-202ENST00000398417 GDNFP39905 211 aa4.54□□□□□ -1.68
SMAD4-202ENST00000398417 ZNF81P51508 661 aa4.54□□□□□ -1.68
SMAD4-202ENST00000398417 AP2S1P53680 142 aaPredicted RBP4.54□□□□□ -1.68
SMAD4-202ENST00000398417 HBMQ6B0K9 141 aa4.54□□□□□ -1.68
SMAD4-202ENST00000398417 FBXO46Q6PJ61 603 aaPredicted RBP4.54□□□□□ -1.68
SMAD4-202ENST00000398417 NEK7Q8TDX7 302 aa4.54□□□□□ -1.68
SMAD4-202ENST00000398417 C10orf90Q96M02 699 aa4.54□□□□□ -1.68
SMAD4-202ENST00000398417 SNX18Q96RF0 628 aa4.54□□□□□ -1.68
SMAD4-202ENST00000398417 SLC38A3Q99624 504 aa4.54□□□□□ -1.68
SMAD4-202ENST00000398417 ORAI3Q9BRQ5 295 aa4.54□□□□□ -1.68
SMAD4-202ENST00000398417 ULBP3Q9BZM4 244 aa4.54□□□□□ -1.68
SMAD4-202ENST00000398417 NUBP2Q9Y5Y2 271 aa4.54□□□□□ -1.68
SMAD4-202ENST00000398417 M0R036 132 aa4.54□□□□□ -1.68
SMAD4-202ENST00000398417 EVX1P49640 407 aa4.54□□□□□ -1.68
SMAD4-202ENST00000398417 CAPZA1P52907 286 aa4.54□□□□□ -1.68
SMAD4-202ENST00000398417 EOGTQ5NDL2 527 aa4.54□□□□□ -1.68
SMAD4-202ENST00000398417 FCRLAQ7L513 359 aa4.54□□□□□ -1.68
SMAD4-202ENST00000398417 RDH10Q8IZV5 341 aa4.54□□□□□ -1.68
SMAD4-202ENST00000398417 RFLNBQ8N5W9 214 aa4.54□□□□□ -1.68
SMAD4-202ENST00000398417 PHOSPHO2Q8TCD6 241 aa4.54□□□□□ -1.68
SMAD4-202ENST00000398417 NSMAFQ92636 917 aa4.54□□□□□ -1.68
SMAD4-202ENST00000398417 OR51J1Q9H342 316 aa4.54□□□□□ -1.68
SMAD4-202ENST00000398417 CD93Q9NPY3 652 aa4.54□□□□□ -1.68
SMAD4-202ENST00000398417 PHIPQ8WWQ0 1821 aa4.54□□□□□ -1.68
SMAD4-202ENST00000398417 TNS1Q9HBL0 1735 aaKnown RBP4.54□□□□□ -1.68
SMAD4-202ENST00000398417 DOCK3Q8IZD9 2030 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms