RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 MED18Q9BUE0 208 aa17.56■□□□□ 0.4
PDLIM2-204ENST00000397760 EXOSC4Q9NPD3 245 aaKnown RBP17.56■□□□□ 0.4
PDLIM2-204ENST00000397760 ANKRD10Q9NXR5 420 aa17.56■□□□□ 0.4
PDLIM2-204ENST00000397760 PRODHO43272 600 aa17.55■□□□□ 0.4
PDLIM2-204ENST00000397760 TLX2O43763 284 aaPredicted RBP17.55■□□□□ 0.4
PDLIM2-204ENST00000397760 PRKYO43930 277 aa17.55■□□□□ 0.4
PDLIM2-204ENST00000397760 IGFBP1P08833 259 aaPredicted RBP17.55■□□□□ 0.4
PDLIM2-204ENST00000397760 PGCP20142 388 aa17.55■□□□□ 0.4
PDLIM2-204ENST00000397760 PTNP21246 168 aa17.55■□□□□ 0.4
PDLIM2-204ENST00000397760 SNTA1Q13424 505 aa17.55■□□□□ 0.4
PDLIM2-204ENST00000397760 PRAMEF20Q5VT98 475 aa17.55■□□□□ 0.4
PDLIM2-204ENST00000397760 MBOAT2Q6ZWT7 520 aa17.55■□□□□ 0.4
PDLIM2-204ENST00000397760 GDPD3Q7L5L3 318 aa17.55■□□□□ 0.4
PDLIM2-204ENST00000397760 PRICKLE2Q7Z3G6 844 aa17.55■□□□□ 0.4
PDLIM2-204ENST00000397760 TMEM163Q8TC26 289 aa17.55■□□□□ 0.4
PDLIM2-204ENST00000397760 PAQR8Q8TEZ7 354 aa17.55■□□□□ 0.4
PDLIM2-204ENST00000397760 TMEM239Q8WW34 195 aa17.55■□□□□ 0.4
PDLIM2-204ENST00000397760 C3orf49Q96BT1 292 aa17.55■□□□□ 0.4
PDLIM2-204ENST00000397760 SDHCQ99643 169 aaPredicted RBP17.55■□□□□ 0.4
PDLIM2-204ENST00000397760 MOV10Q9HCE1 1003 aaKnown RBP17.55■□□□□ 0.4
PDLIM2-204ENST00000397760 SH2D2AQ9NP31 389 aa17.55■□□□□ 0.4
PDLIM2-204ENST00000397760 PPP4R1LQ9P1A2 415 aa17.55■□□□□ 0.4
PDLIM2-204ENST00000397760 GRIP1Q9Y3R0 1128 aa17.55■□□□□ 0.4
PDLIM2-204ENST00000397760 WIF1Q9Y5W5 379 aa17.55■□□□□ 0.4
PDLIM2-204ENST00000397760 CTDSP2O14595 271 aa17.54■□□□□ 0.4
PDLIM2-204ENST00000397760 CCL3P10147 92 aa17.54■□□□□ 0.4
PDLIM2-204ENST00000397760 MYL12AP19105 171 aa17.54■□□□□ 0.4
PDLIM2-204ENST00000397760 TSPAN31Q12999 210 aa17.54■□□□□ 0.4
PDLIM2-204ENST00000397760 TOMM34Q15785 309 aaPredicted RBP17.54■□□□□ 0.4
PDLIM2-204ENST00000397760 ABHD17BQ5VST6 288 aa17.54■□□□□ 0.4
PDLIM2-204ENST00000397760 SLC22A10Q63ZE4 541 aa17.54■□□□□ 0.4
PDLIM2-204ENST00000397760 SLC27A4Q6P1M0 643 aa17.54■□□□□ 0.4
PDLIM2-204ENST00000397760 TMEM81Q6P7N7 255 aa17.54■□□□□ 0.4
PDLIM2-204ENST00000397760 CCBE1Q6UXH8 406 aaPredicted RBP17.54■□□□□ 0.4
PDLIM2-204ENST00000397760 RTL4Q6ZR62 310 aa17.54■□□□□ 0.4
PDLIM2-204ENST00000397760 LSRQ86X29 649 aaPredicted RBP17.54■□□□□ 0.4
PDLIM2-204ENST00000397760 PIGXQ8TBF5 258 aa17.54■□□□□ 0.4
PDLIM2-204ENST00000397760 KCNE4Q8WWG9 221 aa17.54■□□□□ 0.4
PDLIM2-204ENST00000397760 ZNF524Q96C55 264 aa17.54■□□□□ 0.4
PDLIM2-204ENST00000397760 LRR1Q96L50 414 aa17.54■□□□□ 0.4
PDLIM2-204ENST00000397760 SGCZQ96LD1 299 aa17.54■□□□□ 0.4
PDLIM2-204ENST00000397760 HS6ST2Q96MM7 605 aa17.54■□□□□ 0.4
PDLIM2-204ENST00000397760 MED11Q9P086 117 aa17.54■□□□□ 0.4
PDLIM2-204ENST00000397760 EXOSC1Q9Y3B2 195 aaKnown RBP17.54■□□□□ 0.4
PDLIM2-204ENST00000397760 ZNF891A8MT65 544 aaPredicted RBP17.54■□□□□ 0.4
PDLIM2-204ENST00000397760 GAAP10253 952 aa17.54■□□□□ 0.4
PDLIM2-204ENST00000397760 SLC1A3P43003 542 aa17.54■□□□□ 0.4
PDLIM2-204ENST00000397760 TPTEP56180 551 aa17.54■□□□□ 0.4
PDLIM2-204ENST00000397760 WNT4P56705 351 aa17.54■□□□□ 0.4
PDLIM2-204ENST00000397760 DOC2BQ14184 412 aa17.54■□□□□ 0.4
PDLIM2-204ENST00000397760 SLC30A6Q6NXT4 461 aa17.54■□□□□ 0.4
PDLIM2-204ENST00000397760 TMPRSS11AQ6ZMR5 421 aa17.54■□□□□ 0.4
PDLIM2-204ENST00000397760 RASSF6Q6ZTQ3 369 aa17.54■□□□□ 0.4
PDLIM2-204ENST00000397760 NRMQ8IXM6 262 aa17.54■□□□□ 0.4
PDLIM2-204ENST00000397760 RNF113BQ8IZP6 322 aaKnown RBP17.54■□□□□ 0.4
PDLIM2-204ENST00000397760 GALNT16Q8N428 558 aa17.54■□□□□ 0.4
PDLIM2-204ENST00000397760 TEX47Q8TBZ9 253 aa17.54■□□□□ 0.4
PDLIM2-204ENST00000397760 GPR119Q8TDV5 335 aa17.54■□□□□ 0.4
PDLIM2-204ENST00000397760 SLC25A46Q96AG3 418 aa17.54■□□□□ 0.4
PDLIM2-204ENST00000397760 SLC38A2Q96QD8 506 aa17.54■□□□□ 0.4
PDLIM2-204ENST00000397760 KCNS3Q9BQ31 491 aa17.54■□□□□ 0.4
PDLIM2-204ENST00000397760 ABI3Q9P2A4 366 aa17.54■□□□□ 0.4
PDLIM2-204ENST00000397760 MSRB2Q9Y3D2 182 aa17.54■□□□□ 0.4
PDLIM2-204ENST00000397760 PIP5K1CO60331 668 aa17.53■□□□□ 0.4
PDLIM2-204ENST00000397760 MST1P26927 711 aa17.53■□□□□ 0.4
PDLIM2-204ENST00000397760 CYB561P49447 251 aa17.53■□□□□ 0.4
PDLIM2-204ENST00000397760 TPBGQ13641 420 aa17.53■□□□□ 0.4
PDLIM2-204ENST00000397760 ACSM5Q6NUN0 579 aa17.53■□□□□ 0.4
PDLIM2-204ENST00000397760 LINC00114Q6XXX2 140 aa17.53■□□□□ 0.4
PDLIM2-204ENST00000397760 MDGA2Q7Z553 956 aa17.53■□□□□ 0.4
PDLIM2-204ENST00000397760 MEX3DQ86XN8 651 aaKnown RBP17.53■□□□□ 0.4
PDLIM2-204ENST00000397760 GPALPP1Q8IXQ4 340 aa17.53■□□□□ 0.4
PDLIM2-204ENST00000397760 ZNF248Q8NDW4 579 aa17.53■□□□□ 0.4
PDLIM2-204ENST00000397760 TEX12Q9BXU0 123 aa17.53■□□□□ 0.4
PDLIM2-204ENST00000397760 ANGPTL4Q9BY76 406 aa17.53■□□□□ 0.4
PDLIM2-204ENST00000397760 BARHL1Q9BZE3 327 aa17.53■□□□□ 0.4
PDLIM2-204ENST00000397760 CNIH4Q9P003 139 aa17.53■□□□□ 0.4
PDLIM2-204ENST00000397760 FREM2Q5SZK8 3169 aa17.52■□□□□ 0.4
PDLIM2-204ENST00000397760 A0A087WUJ7 227 aa17.52■□□□□ 0.4
PDLIM2-204ENST00000397760 ANKUB1A6NFN9 424 aa17.52■□□□□ 0.4
PDLIM2-204ENST00000397760 B4DXG7 233 aa17.52■□□□□ 0.4
PDLIM2-204ENST00000397760 GNB5O14775 395 aa17.52■□□□□ 0.4
PDLIM2-204ENST00000397760 KLK10O43240 276 aa17.52■□□□□ 0.4
PDLIM2-204ENST00000397760 CDC40O60508 579 aaKnown RBP eCLIP17.52■□□□□ 0.4
PDLIM2-204ENST00000397760 GP1BBP13224 206 aa17.52■□□□□ 0.4
PDLIM2-204ENST00000397760 MSX1P28360 303 aa17.52■□□□□ 0.4
PDLIM2-204ENST00000397760 RBM34P42696 430 aaKnown RBP17.52■□□□□ 0.4
PDLIM2-204ENST00000397760 OMPP47874 163 aa17.52■□□□□ 0.4
PDLIM2-204ENST00000397760 SUMO3P55854 103 aaPredicted RBP17.52■□□□□ 0.4
PDLIM2-204ENST00000397760 OC90Q02509 493 aaPredicted RBP17.52■□□□□ 0.4
PDLIM2-204ENST00000397760 QPRTQ15274 297 aa17.52■□□□□ 0.4
PDLIM2-204ENST00000397760 SNAPC1Q16533 368 aa17.52■□□□□ 0.4
PDLIM2-204ENST00000397760 CRTC2Q53ET0 693 aaPredicted RBP17.52■□□□□ 0.4
PDLIM2-204ENST00000397760 PFN4Q8NHR9 129 aa17.52■□□□□ 0.4
PDLIM2-204ENST00000397760 FAM46AQ96IP4 442 aaKnown RBP17.52■□□□□ 0.4
PDLIM2-204ENST00000397760 GPA33Q99795 319 aa17.52■□□□□ 0.4
PDLIM2-204ENST00000397760 COQ7Q99807 217 aa17.52■□□□□ 0.4
PDLIM2-204ENST00000397760 ZNF426Q9BUY5 554 aa17.52■□□□□ 0.4
PDLIM2-204ENST00000397760 ADAM19Q9H013 955 aa17.52■□□□□ 0.4
PDLIM2-204ENST00000397760 KRCC1Q9NPI7 259 aaPredicted RBP17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms