RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 HCCSP53701 268 aa12.22□□□□□ -0.45
TRIM40-207ENST00000396581 MRPS21P82921 87 aaKnown RBP12.22□□□□□ -0.45
TRIM40-207ENST00000396581 IL10RAQ13651 578 aa12.22□□□□□ -0.45
TRIM40-207ENST00000396581 TJAP1Q5JTD0 557 aa12.22□□□□□ -0.45
TRIM40-207ENST00000396581 FAM122CQ6P4D5 195 aa12.22□□□□□ -0.45
TRIM40-207ENST00000396581 TMEM81Q6P7N7 255 aa12.22□□□□□ -0.45
TRIM40-207ENST00000396581 APOOLQ6UXV4 268 aa12.22□□□□□ -0.45
TRIM40-207ENST00000396581 LINC00114Q6XXX2 140 aa12.22□□□□□ -0.45
TRIM40-207ENST00000396581 CHMP1BQ7LBR1 199 aa12.22□□□□□ -0.45
TRIM40-207ENST00000396581 SLC35F2Q8IXU6 374 aa12.22□□□□□ -0.45
TRIM40-207ENST00000396581 CDRT4Q8N9R6 151 aa12.22□□□□□ -0.45
TRIM40-207ENST00000396581 FCAMRQ8WWV6 532 aa12.22□□□□□ -0.45
TRIM40-207ENST00000396581 RAB40AQ8WXH6 277 aa12.22□□□□□ -0.45
TRIM40-207ENST00000396581 TM4SF19Q96DZ7 209 aa12.22□□□□□ -0.45
TRIM40-207ENST00000396581 LINC00052Q96N35 136 aa12.22□□□□□ -0.45
TRIM40-207ENST00000396581 SERINC2Q96SA4 455 aa12.22□□□□□ -0.45
TRIM40-207ENST00000396581 SEC22CQ9BRL7 303 aa12.22□□□□□ -0.45
TRIM40-207ENST00000396581 KIR3DX1Q9H7L2 352 aa12.22□□□□□ -0.45
TRIM40-207ENST00000396581 TMEM27Q9HBJ8 222 aa12.22□□□□□ -0.45
TRIM40-207ENST00000396581 NOX4Q9NPH5 578 aa12.22□□□□□ -0.45
TRIM40-207ENST00000396581 CD93Q9NPY3 652 aa12.22□□□□□ -0.45
TRIM40-207ENST00000396581 POLE3Q9NRF9 147 aa12.22□□□□□ -0.45
TRIM40-207ENST00000396581 FOXJ3Q9UPW0 622 aa12.22□□□□□ -0.45
TRIM40-207ENST00000396581 HMSDA8MTL9 139 aa12.22□□□□□ -0.45
TRIM40-207ENST00000396581 L7N2F9 121 aa12.22□□□□□ -0.45
TRIM40-207ENST00000396581 MBTPS2O43462 519 aa12.22□□□□□ -0.45
TRIM40-207ENST00000396581 BRINP1O60477 761 aa12.22□□□□□ -0.45
TRIM40-207ENST00000396581 PPM1BO75688 479 aa12.22□□□□□ -0.45
TRIM40-207ENST00000396581 NDUFB6O95139 128 aa12.22□□□□□ -0.45
TRIM40-207ENST00000396581 KLF8O95600 359 aaPredicted RBP12.22□□□□□ -0.45
TRIM40-207ENST00000396581 LDOC1O95751 146 aaPredicted RBP12.22□□□□□ -0.45
TRIM40-207ENST00000396581 NGFRP08138 427 aa12.22□□□□□ -0.45
TRIM40-207ENST00000396581 HOXB2P14652 356 aa12.22□□□□□ -0.45
TRIM40-207ENST00000396581 NAT1P18440 290 aa12.22□□□□□ -0.45
TRIM40-207ENST00000396581 SMAD4Q13485 552 aaKnown RBP12.22□□□□□ -0.45
TRIM40-207ENST00000396581 IRF4Q15306 451 aa12.22□□□□□ -0.45
TRIM40-207ENST00000396581 NAXDQ8IW45 347 aa12.22□□□□□ -0.45
TRIM40-207ENST00000396581 ARL14Q8N4G2 192 aa12.22□□□□□ -0.45
TRIM40-207ENST00000396581 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.22□□□□□ -0.45
TRIM40-207ENST00000396581 MOSPD2Q8NHP6 518 aa12.22□□□□□ -0.45
TRIM40-207ENST00000396581 NSMAFQ92636 917 aa12.22□□□□□ -0.45
TRIM40-207ENST00000396581 HOXB13Q92826 284 aaPredicted RBP12.22□□□□□ -0.45
TRIM40-207ENST00000396581 HAVCR1Q96D42 359 aa12.22□□□□□ -0.45
TRIM40-207ENST00000396581 ZMYND19Q96E35 227 aaPredicted RBP12.22□□□□□ -0.45
TRIM40-207ENST00000396581 ELMOD3Q96FG2 381 aa12.22□□□□□ -0.45
TRIM40-207ENST00000396581 TOE1Q96GM8 510 aaKnown RBP12.22□□□□□ -0.45
TRIM40-207ENST00000396581 PDCD1LG2Q9BQ51 273 aa12.22□□□□□ -0.45
TRIM40-207ENST00000396581 FLRT3Q9NZU0 649 aa12.22□□□□□ -0.45
TRIM40-207ENST00000396581 MRPL15Q9P015 296 aaKnown RBP12.22□□□□□ -0.45
TRIM40-207ENST00000396581 NCDNQ9UBB6 729 aa12.22□□□□□ -0.45
TRIM40-207ENST00000396581 KLK11Q9UBX7 282 aa12.22□□□□□ -0.45
TRIM40-207ENST00000396581 DAPP1Q9UN19 280 aa12.22□□□□□ -0.45
TRIM40-207ENST00000396581 SLC17A4Q9Y2C5 497 aa12.22□□□□□ -0.45
TRIM40-207ENST00000396581 PCDHGA5Q9Y5G8 931 aa12.22□□□□□ -0.45
TRIM40-207ENST00000396581 COL4A2P08572 1712 aa12.21□□□□□ -0.45
TRIM40-207ENST00000396581 KRBOX1C9JBD0 128 aa12.21□□□□□ -0.45
TRIM40-207ENST00000396581 MAGEB4O15481 346 aaPredicted RBP12.21□□□□□ -0.45
TRIM40-207ENST00000396581 PLRG1O43660 514 aaKnown RBP12.21□□□□□ -0.45
TRIM40-207ENST00000396581 CREBL2O60519 120 aaPredicted RBP12.21□□□□□ -0.45
TRIM40-207ENST00000396581 IFNA16P05015 189 aa12.21□□□□□ -0.45
TRIM40-207ENST00000396581 CEACAM5P06731 702 aa12.21□□□□□ -0.45
TRIM40-207ENST00000396581 CALCBP10092 127 aa12.21□□□□□ -0.45
TRIM40-207ENST00000396581 HIST1H1CP16403 213 aaKnown RBP12.21□□□□□ -0.45
TRIM40-207ENST00000396581 EDNRAP25101 427 aa12.21□□□□□ -0.45
TRIM40-207ENST00000396581 DIO1P49895 249 aa12.21□□□□□ -0.45
TRIM40-207ENST00000396581 RPS21P63220 83 aaKnown RBP12.21□□□□□ -0.45
TRIM40-207ENST00000396581 SIM1P81133 766 aaPredicted RBP12.21□□□□□ -0.45
TRIM40-207ENST00000396581 RUNX2Q13950 521 aa12.21□□□□□ -0.45
TRIM40-207ENST00000396581 FGL2Q14314 439 aa12.21□□□□□ -0.45
TRIM40-207ENST00000396581 KRT33BQ14525 404 aa12.21□□□□□ -0.45
TRIM40-207ENST00000396581 LINC00303Q3SY05 128 aa12.21□□□□□ -0.45
TRIM40-207ENST00000396581 PWWP2BQ6NUJ5 590 aa12.21□□□□□ -0.45
TRIM40-207ENST00000396581 ESX1Q8N693 406 aa12.21□□□□□ -0.45
TRIM40-207ENST00000396581 OR52E2Q8NGJ4 325 aa12.21□□□□□ -0.45
TRIM40-207ENST00000396581 C15orf40Q8WUR7 153 aa12.21□□□□□ -0.45
TRIM40-207ENST00000396581 SNX33Q8WV41 574 aa12.21□□□□□ -0.45
TRIM40-207ENST00000396581 RNF166Q96A37 237 aaPredicted RBP12.21□□□□□ -0.45
TRIM40-207ENST00000396581 TWSG1Q9GZX9 223 aa12.21□□□□□ -0.45
TRIM40-207ENST00000396581 GPN1Q9HCN4 374 aaPredicted RBP12.21□□□□□ -0.45
TRIM40-207ENST00000396581 PHPT1Q9NRX4 125 aaPredicted RBP12.21□□□□□ -0.45
TRIM40-207ENST00000396581 C2orf42Q9NWW7 574 aa12.21□□□□□ -0.45
TRIM40-207ENST00000396581 PLEKHM1Q9Y4G2 1056 aa12.21□□□□□ -0.45
TRIM40-207ENST00000396581 SLC22A7Q9Y694 548 aa12.21□□□□□ -0.45
TRIM40-207ENST00000396581 NPIPA5A0A0B4J1W7 369 aa12.2□□□□□ -0.46
TRIM40-207ENST00000396581 GXYLT2A0PJZ3 443 aa12.2□□□□□ -0.46
TRIM40-207ENST00000396581 SHISA7A6NL88 538 aa12.2□□□□□ -0.46
TRIM40-207ENST00000396581 NPIPA7E9PJI5 369 aa12.2□□□□□ -0.46
TRIM40-207ENST00000396581 SUSD5O60279 629 aa12.2□□□□□ -0.46
TRIM40-207ENST00000396581 PAK4O96013 591 aaPredicted RBP12.2□□□□□ -0.46
TRIM40-207ENST00000396581 GUSBP08236 651 aa12.2□□□□□ -0.46
TRIM40-207ENST00000396581 NPIPA8P0DM63 369 aa12.2□□□□□ -0.46
TRIM40-207ENST00000396581 COL9A1P20849 921 aa12.2□□□□□ -0.46
TRIM40-207ENST00000396581 P2RX1P51575 399 aa12.2□□□□□ -0.46
TRIM40-207ENST00000396581 NUMA1Q14980 2115 aa12.2□□□□□ -0.46
TRIM40-207ENST00000396581 TUSC1Q2TAM9 212 aa12.2□□□□□ -0.46
TRIM40-207ENST00000396581 SLC35D3Q5M8T2 416 aa12.2□□□□□ -0.46
TRIM40-207ENST00000396581 ZNF684Q5T5D7 378 aa12.2□□□□□ -0.46
TRIM40-207ENST00000396581 HES5Q5TA89 166 aa12.2□□□□□ -0.46
TRIM40-207ENST00000396581 SLC25A25Q6KCM7 469 aa12.2□□□□□ -0.46
TRIM40-207ENST00000396581 ZC3H14Q6PJT7 736 aaKnown RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms