RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 MAGEA2P43356 314 aa4.27□□□□□ -1.73
GABPB1-204ENST00000396464 RPL14P50914 215 aaKnown RBP4.27□□□□□ -1.73
GABPB1-204ENST00000396464 LBX1P52954 281 aa4.27□□□□□ -1.73
GABPB1-204ENST00000396464 BRWD1-AS2P59051 145 aa4.27□□□□□ -1.73
GABPB1-204ENST00000396464 ZP1P60852 638 aa4.27□□□□□ -1.73
GABPB1-204ENST00000396464 ERVK11-1P61568 191 aa4.27□□□□□ -1.73
GABPB1-204ENST00000396464 RPL10AP62906 217 aaKnown RBP4.27□□□□□ -1.73
GABPB1-204ENST00000396464 REEP5Q00765 189 aa4.27□□□□□ -1.73
GABPB1-204ENST00000396464 ID2Q02363 134 aa4.27□□□□□ -1.73
GABPB1-204ENST00000396464 RBBP4Q09028 425 aa4.27□□□□□ -1.73
GABPB1-204ENST00000396464 RAB40BQ12829 278 aa4.27□□□□□ -1.73
GABPB1-204ENST00000396464 TRAF3Q13114 568 aa4.27□□□□□ -1.73
GABPB1-204ENST00000396464 ACTBL2Q562R1 376 aa4.27□□□□□ -1.73
GABPB1-204ENST00000396464 ATRAIDQ6UW56 229 aa4.27□□□□□ -1.73
GABPB1-204ENST00000396464 PARM1Q6UWI2 310 aa4.27□□□□□ -1.73
GABPB1-204ENST00000396464 LEKR1Q6ZMV7 388 aa4.27□□□□□ -1.73
GABPB1-204ENST00000396464 SLC25A48Q6ZT89 311 aaKnown RBP4.27□□□□□ -1.73
GABPB1-204ENST00000396464 NCCRP1Q6ZVX7 275 aaPredicted RBP4.27□□□□□ -1.73
GABPB1-204ENST00000396464 ASB18Q6ZVZ8 466 aa4.27□□□□□ -1.73
GABPB1-204ENST00000396464 ABHD13Q7L211 337 aa4.27□□□□□ -1.73
GABPB1-204ENST00000396464 DND1Q8IYX4 353 aaKnown RBP4.27□□□□□ -1.73
GABPB1-204ENST00000396464 TPRX1Q8N7U7 411 aa4.27□□□□□ -1.73
GABPB1-204ENST00000396464 Q8N9P0 234 aaPredicted RBP4.27□□□□□ -1.73
GABPB1-204ENST00000396464 OR5D18Q8NGL1 313 aa4.27□□□□□ -1.73
GABPB1-204ENST00000396464 TM9SF4Q92544 642 aa4.27□□□□□ -1.73
GABPB1-204ENST00000396464 RPEQ96AT9 228 aa4.27□□□□□ -1.73
GABPB1-204ENST00000396464 RTP4Q96DX8 246 aa4.27□□□□□ -1.73
GABPB1-204ENST00000396464 ABHD8Q96I13 439 aa4.27□□□□□ -1.73
GABPB1-204ENST00000396464 IL12RB2Q99665 862 aa4.27□□□□□ -1.73
GABPB1-204ENST00000396464 LPAR4Q99677 370 aa4.27□□□□□ -1.73
GABPB1-204ENST00000396464 APOL2Q9BQE5 337 aa4.27□□□□□ -1.73
GABPB1-204ENST00000396464 NEURL2Q9BR09 285 aa4.27□□□□□ -1.73
GABPB1-204ENST00000396464 UTP23Q9BRU9 249 aaKnown RBP4.27□□□□□ -1.73
GABPB1-204ENST00000396464 NAA50Q9GZZ1 169 aaKnown RBP4.27□□□□□ -1.73
GABPB1-204ENST00000396464 SYT4Q9H2B2 425 aa4.27□□□□□ -1.73
GABPB1-204ENST00000396464 GLIPR2Q9H4G4 154 aa4.27□□□□□ -1.73
GABPB1-204ENST00000396464 VCX3AQ9NNX9 186 aa4.27□□□□□ -1.73
GABPB1-204ENST00000396464 UBE2TQ9NPD8 197 aaPredicted RBP4.27□□□□□ -1.73
GABPB1-204ENST00000396464 RMND1Q9NWS8 449 aa4.27□□□□□ -1.73
GABPB1-204ENST00000396464 WARS2Q9UGM6 360 aaKnown RBP4.27□□□□□ -1.73
GABPB1-204ENST00000396464 MRPS28Q9Y2Q9 187 aaKnown RBP4.27□□□□□ -1.73
GABPB1-204ENST00000396464 HYOU1Q9Y4L1 999 aa4.27□□□□□ -1.73
GABPB1-204ENST00000396464 OARD1Q9Y530 152 aa4.27□□□□□ -1.73
GABPB1-204ENST00000396464 TIMM22Q9Y584 194 aa4.27□□□□□ -1.73
GABPB1-204ENST00000396464 UBN2Q6ZU65 1347 aa4.26□□□□□ -1.73
GABPB1-204ENST00000396464 A0A0A6YYD4 124 aa4.26□□□□□ -1.73
GABPB1-204ENST00000396464 A0A1W2PRF3 423 aa4.26□□□□□ -1.73
GABPB1-204ENST00000396464 A0A1W2PRM7 423 aa4.26□□□□□ -1.73
GABPB1-204ENST00000396464 GOLGA6L10A6NI86 522 aa4.26□□□□□ -1.73
GABPB1-204ENST00000396464 EI24O14681 340 aa4.26□□□□□ -1.73
GABPB1-204ENST00000396464 EIF4E2O60573 245 aaKnown RBP4.26□□□□□ -1.73
GABPB1-204ENST00000396464 SOGA1O94964 1423 aa4.26□□□□□ -1.73
GABPB1-204ENST00000396464 PLEKHA8P1O95397 391 aa4.26□□□□□ -1.73
GABPB1-204ENST00000396464 DEXIO95424 95 aa4.26□□□□□ -1.73
GABPB1-204ENST00000396464 OAS1P00973 400 aaKnown RBP4.26□□□□□ -1.73
GABPB1-204ENST00000396464 GPIP06744 558 aa4.26□□□□□ -1.73
GABPB1-204ENST00000396464 CTRB1P17538 263 aa4.26□□□□□ -1.73
GABPB1-204ENST00000396464 HLA-GP17693 338 aa4.26□□□□□ -1.73
GABPB1-204ENST00000396464 ATP5A1P25705 553 aaKnown RBP4.26□□□□□ -1.73
GABPB1-204ENST00000396464 RPL4P36578 427 aaKnown RBP4.26□□□□□ -1.73
GABPB1-204ENST00000396464 FEN1P39748 380 aaKnown RBP4.26□□□□□ -1.73
GABPB1-204ENST00000396464 OPRD1P41143 372 aa4.26□□□□□ -1.73
GABPB1-204ENST00000396464 TUFMP49411 452 aaKnown RBP4.26□□□□□ -1.73
GABPB1-204ENST00000396464 CEBPGP53567 150 aa4.26□□□□□ -1.73
GABPB1-204ENST00000396464 AP3S2P59780 193 aa4.26□□□□□ -1.73
GABPB1-204ENST00000396464 DCDC1P59894 354 aa4.26□□□□□ -1.73
GABPB1-204ENST00000396464 RAB14P61106 215 aa4.26□□□□□ -1.73
GABPB1-204ENST00000396464 VSNL1P62760 191 aa4.26□□□□□ -1.73
GABPB1-204ENST00000396464 POU3F1Q03052 451 aaPredicted RBP4.26□□□□□ -1.73
GABPB1-204ENST00000396464 GPR18Q14330 331 aa4.26□□□□□ -1.73
GABPB1-204ENST00000396464 SLC17A1Q14916 467 aa4.26□□□□□ -1.73
GABPB1-204ENST00000396464 MOGQ16653 247 aa4.26□□□□□ -1.73
GABPB1-204ENST00000396464 NDUFAF6Q330K2 333 aa4.26□□□□□ -1.73
GABPB1-204ENST00000396464 ASPRV1Q53RT3 343 aa4.26□□□□□ -1.73
GABPB1-204ENST00000396464 CYBRD1Q53TN4 286 aa4.26□□□□□ -1.73
GABPB1-204ENST00000396464 SPANXN4Q5MJ08 99 aa4.26□□□□□ -1.73
GABPB1-204ENST00000396464 CTRB2Q6GPI1 263 aa4.26□□□□□ -1.73
GABPB1-204ENST00000396464 MOB2Q70IA6 237 aa4.26□□□□□ -1.73
GABPB1-204ENST00000396464 FCRLAQ7L513 359 aa4.26□□□□□ -1.73
GABPB1-204ENST00000396464 SLC47A2Q86VL8 602 aa4.26□□□□□ -1.73
GABPB1-204ENST00000396464 ZNF677Q86XU0 584 aa4.26□□□□□ -1.73
GABPB1-204ENST00000396464 CMTM1Q8IZ96 169 aa4.26□□□□□ -1.73
GABPB1-204ENST00000396464 DCP1BQ8IZD4 617 aaKnown RBP4.26□□□□□ -1.73
GABPB1-204ENST00000396464 LIX1Q8N485 282 aa4.26□□□□□ -1.73
GABPB1-204ENST00000396464 DNAJC22Q8N4W6 341 aa4.26□□□□□ -1.73
GABPB1-204ENST00000396464 FAM89BQ8N5H3 189 aa4.26□□□□□ -1.73
GABPB1-204ENST00000396464 KIR3DL3Q8N743 410 aa4.26□□□□□ -1.73
GABPB1-204ENST00000396464 GVQW1Q8N7I0 195 aa4.26□□□□□ -1.73
GABPB1-204ENST00000396464 C9orf106Q8NAJ2 232 aa4.26□□□□□ -1.73
GABPB1-204ENST00000396464 ZSCAN4Q8NAM6 433 aaPredicted RBP4.26□□□□□ -1.73
GABPB1-204ENST00000396464 NOXO1Q8NFA2 376 aa4.26□□□□□ -1.73
GABPB1-204ENST00000396464 OR52H1Q8NGJ2 320 aa4.26□□□□□ -1.73
GABPB1-204ENST00000396464 OR6N2Q8NGY6 317 aa4.26□□□□□ -1.73
GABPB1-204ENST00000396464 OR4Q3Q8NH05 313 aa4.26□□□□□ -1.73
GABPB1-204ENST00000396464 LYPD6BQ8NI32 183 aa4.26□□□□□ -1.73
GABPB1-204ENST00000396464 MRAPQ8TCY5 172 aa4.26□□□□□ -1.73
GABPB1-204ENST00000396464 AENQ8WTP8 325 aaKnown RBP4.26□□□□□ -1.73
GABPB1-204ENST00000396464 NEIL2Q969S2 332 aa4.26□□□□□ -1.73
GABPB1-204ENST00000396464 NTNG2Q96CW9 530 aa4.26□□□□□ -1.73
GABPB1-204ENST00000396464 ZBED6CLQ96FA7 236 aaPredicted RBP4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms