RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 HIST1H2ABP04908 130 aa13.6□□□□□ -0.23
CBX3-202ENST00000396386 HNRNPCP07910 306 aaKnown RBP eCLIP13.6□□□□□ -0.239e-6■■■□□ 17.7
CBX3-202ENST00000396386 F8A1P23610 371 aa13.6□□□□□ -0.23
CBX3-202ENST00000396386 SDHAP31040 664 aa13.6□□□□□ -0.23
CBX3-202ENST00000396386 RANBP1P43487 201 aa13.6□□□□□ -0.23
CBX3-202ENST00000396386 POLR2HP52434 150 aaKnown RBP13.6□□□□□ -0.23
CBX3-202ENST00000396386 EMP2P54851 167 aa13.6□□□□□ -0.23
CBX3-202ENST00000396386 OR12D2P58182 307 aa13.6□□□□□ -0.23
CBX3-202ENST00000396386 CTXN1P60606 82 aa13.6□□□□□ -0.23
CBX3-202ENST00000396386 LTBQ06643 244 aa13.6□□□□□ -0.23
CBX3-202ENST00000396386 RPL18Q07020 188 aaKnown RBP13.6□□□□□ -0.23
CBX3-202ENST00000396386 KRR1Q13601 381 aaKnown RBP13.6□□□□□ -0.23
CBX3-202ENST00000396386 TOMM34Q15785 309 aaPredicted RBP13.6□□□□□ -0.23
CBX3-202ENST00000396386 PAPD4Q6PIY7 484 aaKnown RBP13.6□□□□□ -0.23
CBX3-202ENST00000396386 HIST3H2AQ7L7L0 130 aa13.6□□□□□ -0.23
CBX3-202ENST00000396386 SSX6Q7RTT6 188 aa13.6□□□□□ -0.23
CBX3-202ENST00000396386 MISPQ8IVT2 679 aa13.6□□□□□ -0.23
CBX3-202ENST00000396386 C1orf210Q8IVY1 113 aa13.6□□□□□ -0.23
CBX3-202ENST00000396386 GHDCQ8N2G8 530 aa13.6□□□□□ -0.23
CBX3-202ENST00000396386 SYS1Q8N2H4 156 aa13.6□□□□□ -0.23
CBX3-202ENST00000396386 RFLNBQ8N5W9 214 aa13.6□□□□□ -0.23
CBX3-202ENST00000396386 APCDD1LQ8NCL9 501 aa13.6□□□□□ -0.23
CBX3-202ENST00000396386 OR51L1Q8NGJ5 315 aa13.6□□□□□ -0.23
CBX3-202ENST00000396386 OR2I1PQ8NGU4 316 aa13.6□□□□□ -0.23
CBX3-202ENST00000396386 NUBPLQ8TB37 319 aa13.6□□□□□ -0.23
CBX3-202ENST00000396386 SMAP2Q8WU79 429 aaPredicted RBP13.6□□□□□ -0.23
CBX3-202ENST00000396386 HIST1H2ACQ93077 130 aa13.6□□□□□ -0.23
CBX3-202ENST00000396386 MRPL48Q96GC5 212 aaKnown RBP13.6□□□□□ -0.23
CBX3-202ENST00000396386 GFM1Q96RP9 751 aaKnown RBP13.6□□□□□ -0.23
CBX3-202ENST00000396386 SDHCQ99643 169 aaPredicted RBP13.6□□□□□ -0.23
CBX3-202ENST00000396386 MIXL1Q9H2W2 232 aa13.6□□□□□ -0.23
CBX3-202ENST00000396386 ABCB9Q9NP78 766 aa13.6□□□□□ -0.23
CBX3-202ENST00000396386 PPIEQ9UNP9 301 aaKnown RBP13.6□□□□□ -0.23
CBX3-202ENST00000396386 VSTM2BA6NLU5 285 aa13.59□□□□□ -0.23
CBX3-202ENST00000396386 E9PI62 339 aa13.59□□□□□ -0.23
CBX3-202ENST00000396386 GLCEO94923 617 aa13.59□□□□□ -0.23
CBX3-202ENST00000396386 TXNDC12O95881 172 aa13.59□□□□□ -0.23
CBX3-202ENST00000396386 BGLAPP02818 100 aa13.59□□□□□ -0.23
CBX3-202ENST00000396386 CFL1P23528 166 aaKnown RBP13.59□□□□□ -0.23
CBX3-202ENST00000396386 RPS5P46782 204 aaKnown RBP13.59□□□□□ -0.23
CBX3-202ENST00000396386 MTNR1BP49286 362 aa13.59□□□□□ -0.23
CBX3-202ENST00000396386 SLC25A1P53007 311 aa13.59□□□□□ -0.23
CBX3-202ENST00000396386 SLC26A5P58743 744 aa13.59□□□□□ -0.23
CBX3-202ENST00000396386 PPP3R1P63098 170 aa13.59□□□□□ -0.23
CBX3-202ENST00000396386 CDC20Q12834 499 aa13.59□□□□□ -0.23
CBX3-202ENST00000396386 INSL4Q14641 139 aa13.59□□□□□ -0.23
CBX3-202ENST00000396386 QPRTQ15274 297 aa13.59□□□□□ -0.23
CBX3-202ENST00000396386 EMC4Q5J8M3 183 aa13.59□□□□□ -0.23
CBX3-202ENST00000396386 POMZP3Q6PJE2 187 aa13.59□□□□□ -0.23
CBX3-202ENST00000396386 DRAXINQ8NBI3 349 aaPredicted RBP13.59□□□□□ -0.23
CBX3-202ENST00000396386 OR6K6Q8NGW6 343 aa13.59□□□□□ -0.23
CBX3-202ENST00000396386 OR5J2Q8NH18 312 aa13.59□□□□□ -0.23
CBX3-202ENST00000396386 CEP76Q8TAP6 659 aa13.59□□□□□ -0.23
CBX3-202ENST00000396386 TAAR8Q969N4 342 aa13.59□□□□□ -0.23
CBX3-202ENST00000396386 ZC3H10Q96K80 434 aaKnown RBP13.59□□□□□ -0.23
CBX3-202ENST00000396386 CPNE5Q9HCH3 593 aa13.59□□□□□ -0.23
CBX3-202ENST00000396386 NPFFR2Q9Y5X5 522 aa13.59□□□□□ -0.23
CBX3-202ENST00000396386 TRBV11-1A0A0K0K1C0 115 aa13.59□□□□□ -0.23
CBX3-202ENST00000396386 PATE3B3GLJ2 98 aa13.59□□□□□ -0.23
CBX3-202ENST00000396386 DUSP3P51452 185 aaPredicted RBP13.59□□□□□ -0.23
CBX3-202ENST00000396386 CAV3P56539 151 aa13.59□□□□□ -0.23
CBX3-202ENST00000396386 E2F1Q01094 437 aa13.59□□□□□ -0.23
CBX3-202ENST00000396386 SLC3A1Q07837 685 aa13.59□□□□□ -0.23
CBX3-202ENST00000396386 TP53I3Q53FA7 332 aa13.59□□□□□ -0.23
CBX3-202ENST00000396386 CRB3Q9BUF7 120 aa13.59□□□□□ -0.23
CBX3-202ENST00000396386 TTTY10Q9BZA0 68 aa13.59□□□□□ -0.23
CBX3-202ENST00000396386 APMAPQ9HDC9 416 aa13.59□□□□□ -0.23
CBX3-202ENST00000396386 TAS2R10Q9NYW0 307 aa13.59□□□□□ -0.23
CBX3-202ENST00000396386 CPAMD8Q8IZJ3 1885 aa13.58□□□□□ -0.24
CBX3-202ENST00000396386 SHISA3A0PJX4 238 aa13.58□□□□□ -0.24
CBX3-202ENST00000396386 D6RAR5 112 aa13.58□□□□□ -0.24
CBX3-202ENST00000396386 SUSD5O60279 629 aa13.58□□□□□ -0.24
CBX3-202ENST00000396386 SELENOFO60613 162 aa13.58□□□□□ -0.24
CBX3-202ENST00000396386 MT-ATP6P00846 226 aa13.58□□□□□ -0.24
CBX3-202ENST00000396386 F13BP05160 661 aa13.58□□□□□ -0.24
CBX3-202ENST00000396386 CYC1P08574 325 aa13.58□□□□□ -0.24
CBX3-202ENST00000396386 PYCR1P32322 319 aa13.58□□□□□ -0.24
CBX3-202ENST00000396386 CDKN2AP42771 156 aaKnown RBP13.58□□□□□ -0.24
CBX3-202ENST00000396386 GBX2P52951 348 aaPredicted RBP13.58□□□□□ -0.24
CBX3-202ENST00000396386 HSF2Q03933 536 aa13.58□□□□□ -0.24
CBX3-202ENST00000396386 ZNF79Q15937 498 aa13.58□□□□□ -0.24
CBX3-202ENST00000396386 CDONQ4KMG0 1287 aa13.58□□□□□ -0.24
CBX3-202ENST00000396386 AGAP7PQ5VUJ5 663 aa13.58□□□□□ -0.24
CBX3-202ENST00000396386 GPR139Q6DWJ6 353 aa13.58□□□□□ -0.24
CBX3-202ENST00000396386 DMKNQ6E0U4 476 aaPredicted RBP13.58□□□□□ -0.24
CBX3-202ENST00000396386 PRR23CQ6ZRP0 262 aa13.58□□□□□ -0.24
CBX3-202ENST00000396386 GRINAQ7Z429 371 aa13.58□□□□□ -0.24
CBX3-202ENST00000396386 CPEB2Q7Z5Q1 589 aaKnown RBP13.58□□□□□ -0.24
CBX3-202ENST00000396386 BPHLQ86WA6 291 aaPredicted RBP13.58□□□□□ -0.24
CBX3-202ENST00000396386 OR8H2Q8N162 312 aa13.58□□□□□ -0.24
CBX3-202ENST00000396386 GPR119Q8TDV5 335 aa13.58□□□□□ -0.24
CBX3-202ENST00000396386 SPSB2Q99619 263 aa13.58□□□□□ -0.24
CBX3-202ENST00000396386 MESP1Q9BRJ9 268 aa13.58□□□□□ -0.24
CBX3-202ENST00000396386 SRRQ9GZT4 340 aa13.58□□□□□ -0.24
CBX3-202ENST00000396386 SLC26A1Q9H2B4 701 aa13.58□□□□□ -0.24
CBX3-202ENST00000396386 RPRD1BQ9NQG5 326 aaKnown RBP13.58□□□□□ -0.24
CBX3-202ENST00000396386 WDR70Q9NW82 654 aa13.58□□□□□ -0.24
CBX3-202ENST00000396386 OCIAD1Q9NX40 245 aa13.58□□□□□ -0.24
CBX3-202ENST00000396386 GRHPRQ9UBQ7 328 aa13.58□□□□□ -0.24
CBX3-202ENST00000396386 C19orf25Q9UFG5 118 aaPredicted RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms