RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 KCTD21Q4G0X4 260 aa18.38■□□□□ 0.53
VCPKMT-202ENST00000395860 SLC35F1Q5T1Q4 408 aa18.38■□□□□ 0.53
VCPKMT-202ENST00000395860 ZADH2Q8N4Q0 377 aa18.38■□□□□ 0.53
VCPKMT-202ENST00000395860 ZFP62Q8NB50 900 aaPredicted RBP18.38■□□□□ 0.53
VCPKMT-202ENST00000395860 SMPDL3BQ92485 455 aa18.38■□□□□ 0.53
VCPKMT-202ENST00000395860 ERMAPQ96PL5 475 aaPredicted RBP18.38■□□□□ 0.53
VCPKMT-202ENST00000395860 MRPL39Q9NYK5 338 aaKnown RBP18.38■□□□□ 0.53
VCPKMT-202ENST00000395860 SEC14L4Q9UDX3 406 aa18.38■□□□□ 0.53
VCPKMT-202ENST00000395860 BLOC1S6Q9UL45 172 aa18.38■□□□□ 0.53
VCPKMT-202ENST00000395860 RAXQ9Y2V3 346 aa18.38■□□□□ 0.53
VCPKMT-202ENST00000395860 HDGFL3Q9Y3E1 203 aa18.38■□□□□ 0.53
VCPKMT-202ENST00000395860 CORINQ9Y5Q5 1042 aa18.38■□□□□ 0.53
VCPKMT-202ENST00000395860 TRAV17A0A0B4J275 112 aa18.37■□□□□ 0.53
VCPKMT-202ENST00000395860 LIPT2A6NK58 231 aa18.37■□□□□ 0.53
VCPKMT-202ENST00000395860 M0R082 166 aa18.37■□□□□ 0.53
VCPKMT-202ENST00000395860 GLSO94925 669 aaPredicted RBP18.37■□□□□ 0.53
VCPKMT-202ENST00000395860 OR6A2O95222 327 aa18.37■□□□□ 0.53
VCPKMT-202ENST00000395860 HPNP05981 417 aa18.37■□□□□ 0.53
VCPKMT-202ENST00000395860 TSPAN19P0C672 248 aa18.37■□□□□ 0.53
VCPKMT-202ENST00000395860 ADORA3P0DMS8 318 aa18.37■□□□□ 0.53
VCPKMT-202ENST00000395860 CRHBPP24387 322 aa18.37■□□□□ 0.53
VCPKMT-202ENST00000395860 MAGEA5P43359 124 aa18.37■□□□□ 0.53
VCPKMT-202ENST00000395860 RAC1P63000 192 aa18.37■□□□□ 0.53
VCPKMT-202ENST00000395860 HYAL4Q2M3T9 481 aa18.37■□□□□ 0.53
VCPKMT-202ENST00000395860 BORAQ6PGQ7 559 aa18.37■□□□□ 0.53
VCPKMT-202ENST00000395860 TMEM251Q8N6I4 163 aa18.37■□□□□ 0.53
VCPKMT-202ENST00000395860 FAM98AQ8NCA5 519 aaKnown RBP18.37■□□□□ 0.53
VCPKMT-202ENST00000395860 ZNF417Q8TAU3 575 aa18.37■□□□□ 0.53
VCPKMT-202ENST00000395860 TMEM163Q8TC26 289 aa18.37■□□□□ 0.53
VCPKMT-202ENST00000395860 ZNF566Q969W8 418 aa18.37■□□□□ 0.53
VCPKMT-202ENST00000395860 Q96MT0 163 aa18.37■□□□□ 0.53
VCPKMT-202ENST00000395860 GPX7Q96SL4 187 aaPredicted RBP18.37■□□□□ 0.53
VCPKMT-202ENST00000395860 ZNF587Q96SQ5 575 aaPredicted RBP18.37■□□□□ 0.53
VCPKMT-202ENST00000395860 ALKBH4Q9NXW9 302 aa18.37■□□□□ 0.53
VCPKMT-202ENST00000395860 SCN3BQ9NY72 215 aa18.37■□□□□ 0.53
VCPKMT-202ENST00000395860 GPR52Q9Y2T5 361 aa18.37■□□□□ 0.53
VCPKMT-202ENST00000395860 ZFHX4Q86UP3 3567 aa18.37■□□□□ 0.53
VCPKMT-202ENST00000395860 PIEZO1Q92508 2521 aa18.37■□□□□ 0.53
VCPKMT-202ENST00000395860 GJE1A6NN92 205 aa18.37■□□□□ 0.53
VCPKMT-202ENST00000395860 ACOT7O00154 380 aa18.37■□□□□ 0.53
VCPKMT-202ENST00000395860 XPNPEP2O43895 674 aa18.37■□□□□ 0.53
VCPKMT-202ENST00000395860 FAM20BO75063 409 aa18.37■□□□□ 0.53
VCPKMT-202ENST00000395860 CCDC159P0C7I6 412 aa18.37■□□□□ 0.53
VCPKMT-202ENST00000395860 CD97P48960 835 aa18.37■□□□□ 0.53
VCPKMT-202ENST00000395860 UCNP55089 124 aa18.37■□□□□ 0.53
VCPKMT-202ENST00000395860 TMPRSS3P57727 454 aa18.37■□□□□ 0.53
VCPKMT-202ENST00000395860 PPIAP62937 165 aaKnown RBP18.37■□□□□ 0.53
VCPKMT-202ENST00000395860 EFNB1P98172 346 aa18.37■□□□□ 0.53
VCPKMT-202ENST00000395860 C19orf57Q0VDD7 668 aa18.37■□□□□ 0.53
VCPKMT-202ENST00000395860 ARHGAP11AQ6P4F7 1023 aa18.37■□□□□ 0.53
VCPKMT-202ENST00000395860 SLC22A16Q86VW1 577 aa18.37■□□□□ 0.53
VCPKMT-202ENST00000395860 FAM26EQ8N5C1 309 aa18.37■□□□□ 0.53
VCPKMT-202ENST00000395860 SCAIQ8N9R8 606 aa18.37■□□□□ 0.53
VCPKMT-202ENST00000395860 LRRC75AQ8NAA5 344 aa18.37■□□□□ 0.53
VCPKMT-202ENST00000395860 KATNB1Q9BVA0 655 aa18.37■□□□□ 0.53
VCPKMT-202ENST00000395860 NRIP3Q9NQ35 241 aa18.37■□□□□ 0.53
VCPKMT-202ENST00000395860 TAS2R5Q9NYW4 299 aa18.37■□□□□ 0.53
VCPKMT-202ENST00000395860 SCOCQ9UIL1 159 aa18.37■□□□□ 0.53
VCPKMT-202ENST00000395860 IER3IP1Q9Y5U9 82 aa18.37■□□□□ 0.53
VCPKMT-202ENST00000395860 C11orf98E9PRG8 122 aa18.36■□□□□ 0.53
VCPKMT-202ENST00000395860 SLC2A10O95528 541 aa18.36■□□□□ 0.53
VCPKMT-202ENST00000395860 F13BP05160 661 aa18.36■□□□□ 0.53
VCPKMT-202ENST00000395860 AHCYP23526 432 aa18.36■□□□□ 0.53
VCPKMT-202ENST00000395860 EEF1B2P24534 225 aaKnown RBP18.36■□□□□ 0.53
VCPKMT-202ENST00000395860 OR2B6P58173 313 aa18.36■□□□□ 0.53
VCPKMT-202ENST00000395860 CTXN1P60606 82 aa18.36■□□□□ 0.53
VCPKMT-202ENST00000395860 ERVK-25P63136 954 aa18.36■□□□□ 0.53
VCPKMT-202ENST00000395860 CSNK2BP67870 215 aa18.36■□□□□ 0.53
VCPKMT-202ENST00000395860 IGFL3Q6UXB1 125 aa18.36■□□□□ 0.53
VCPKMT-202ENST00000395860 DNAJC27Q9NZQ0 273 aa18.36■□□□□ 0.53
VCPKMT-202ENST00000395860 SLC6A5Q9Y345 797 aa18.36■□□□□ 0.53
VCPKMT-202ENST00000395860 TPRKBQ9Y3C4 175 aa18.36■□□□□ 0.53
VCPKMT-202ENST00000395860 ADAM18Q9Y3Q7 739 aa18.36■□□□□ 0.53
VCPKMT-202ENST00000395860 KIAA1549Q9HCM3 1950 aa18.35■□□□□ 0.53
VCPKMT-202ENST00000395860 SULT2B1O00204 365 aa18.35■□□□□ 0.53
VCPKMT-202ENST00000395860 PLPP3O14495 311 aa18.35■□□□□ 0.53
VCPKMT-202ENST00000395860 RNF13O43567 381 aa18.35■□□□□ 0.53
VCPKMT-202ENST00000395860 CD14P08571 375 aa18.35■□□□□ 0.53
VCPKMT-202ENST00000395860 DIO1P49895 249 aa18.35■□□□□ 0.53
VCPKMT-202ENST00000395860 OCLNQ16625 522 aa18.35■□□□□ 0.53
VCPKMT-202ENST00000395860 TMEM201Q5SNT2 666 aa18.35■□□□□ 0.53
VCPKMT-202ENST00000395860 MEDAGQ5VYS4 303 aa18.35■□□□□ 0.53
VCPKMT-202ENST00000395860 TMEM154Q6P9G4 183 aa18.35■□□□□ 0.53
VCPKMT-202ENST00000395860 TMPPEQ6ZT21 453 aa18.35■□□□□ 0.53
VCPKMT-202ENST00000395860 H1FNTQ75WM6 255 aaPredicted RBP18.35■□□□□ 0.53
VCPKMT-202ENST00000395860 TSPAN14Q8NG11 270 aa18.35■□□□□ 0.53
VCPKMT-202ENST00000395860 LRR1Q96L50 414 aa18.35■□□□□ 0.53
VCPKMT-202ENST00000395860 CHST11Q9NPF2 352 aa18.35■□□□□ 0.53
VCPKMT-202ENST00000395860 CMC2Q9NRP2 79 aa18.35■□□□□ 0.53
VCPKMT-202ENST00000395860 QPCTLQ9NXS2 382 aa18.35■□□□□ 0.53
VCPKMT-202ENST00000395860 TRAPPC4Q9Y296 219 aa18.35■□□□□ 0.53
VCPKMT-202ENST00000395860 APC2O95996 2303 aa18.35■□□□□ 0.53
VCPKMT-202ENST00000395860 SH3D21A4FU49 640 aa18.35■□□□□ 0.53
VCPKMT-202ENST00000395860 RIIAD1A6NNX1 92 aa18.35■□□□□ 0.53
VCPKMT-202ENST00000395860 MKRN2OSH3BPM6 223 aa18.35■□□□□ 0.53
VCPKMT-202ENST00000395860 LINC01387J3KSC0 135 aa18.35■□□□□ 0.53
VCPKMT-202ENST00000395860 ARPC3O15145 178 aa18.35■□□□□ 0.53
VCPKMT-202ENST00000395860 ENTPD6O75354 484 aa18.35■□□□□ 0.53
VCPKMT-202ENST00000395860 AKR7A3O95154 331 aa18.35■□□□□ 0.53
VCPKMT-202ENST00000395860 PMS2P2O95744 297 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms