RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 RUNDC3AQ59EK9 446 aa12.09□□□□□ -0.47
CXCL12-205ENST00000395794 ALG10BQ5I7T1 473 aa12.09□□□□□ -0.47
CXCL12-205ENST00000395794 ULK3Q6PHR2 472 aa12.09□□□□□ -0.47
CXCL12-205ENST00000395794 SLC22A25Q6T423 547 aa12.09□□□□□ -0.47
CXCL12-205ENST00000395794 SEZ6L2Q6UXD5 910 aa12.09□□□□□ -0.47
CXCL12-205ENST00000395794 CLEC9AQ6UXN8 241 aa12.09□□□□□ -0.47
CXCL12-205ENST00000395794 DLEU7Q6UYE1 221 aa12.09□□□□□ -0.47
CXCL12-205ENST00000395794 CREB3L2Q70SY1 520 aa12.09□□□□□ -0.47
CXCL12-205ENST00000395794 RANBP3LQ86VV4 465 aaPredicted RBP12.09□□□□□ -0.47
CXCL12-205ENST00000395794 LILRB1Q8NHL6 650 aaPredicted RBP12.09□□□□□ -0.47
CXCL12-205ENST00000395794 NEUROG1Q92886 237 aa12.09□□□□□ -0.47
CXCL12-205ENST00000395794 SLC38A4Q969I6 547 aa12.09□□□□□ -0.47
CXCL12-205ENST00000395794 SLC47A1Q96FL8 570 aa12.09□□□□□ -0.47
CXCL12-205ENST00000395794 CPPED1Q9BRF8 314 aaPredicted RBP12.09□□□□□ -0.47
CXCL12-205ENST00000395794 IKZF5Q9H5V7 419 aa12.09□□□□□ -0.47
CXCL12-205ENST00000395794 TESQ9UGI8 421 aaKnown RBP12.09□□□□□ -0.47
CXCL12-205ENST00000395794 SLC25A15Q9Y619 301 aa12.09□□□□□ -0.47
CXCL12-205ENST00000395794 A0A1B0GWA3 101 aa12.08□□□□□ -0.48
CXCL12-205ENST00000395794 A0A1W2PR80 420 aa12.08□□□□□ -0.48
CXCL12-205ENST00000395794 ZNF587BE7ETH6 402 aa12.08□□□□□ -0.48
CXCL12-205ENST00000395794 PDLIM1O00151 329 aa12.08□□□□□ -0.48
CXCL12-205ENST00000395794 SMAD7O15105 426 aaKnown RBP12.08□□□□□ -0.48
CXCL12-205ENST00000395794 NPIPB7O75200 414 aa12.08□□□□□ -0.48
CXCL12-205ENST00000395794 WNT11O96014 354 aa12.08□□□□□ -0.48
CXCL12-205ENST00000395794 ZNF43P17038 809 aa12.08□□□□□ -0.48
CXCL12-205ENST00000395794 PRPS1P60891 318 aa12.08□□□□□ -0.48
CXCL12-205ENST00000395794 C1DQ13901 141 aaKnown RBP12.08□□□□□ -0.48
CXCL12-205ENST00000395794 ETFDHQ16134 617 aa12.08□□□□□ -0.48
CXCL12-205ENST00000395794 AGAP6Q5VW22 663 aa12.08□□□□□ -0.48
CXCL12-205ENST00000395794 FAM91A1Q658Y4 838 aa12.08□□□□□ -0.48
CXCL12-205ENST00000395794 NIPAL3Q6P499 406 aa12.08□□□□□ -0.48
CXCL12-205ENST00000395794 C6orf89Q6UWU4 347 aa12.08□□□□□ -0.48
CXCL12-205ENST00000395794 NET1Q7Z628 596 aaPredicted RBP12.08□□□□□ -0.48
CXCL12-205ENST00000395794 SLC30A8Q8IWU4 369 aa12.08□□□□□ -0.48
CXCL12-205ENST00000395794 C10orf111Q8N326 155 aa12.08□□□□□ -0.48
CXCL12-205ENST00000395794 DPP10Q8N608 796 aa12.08□□□□□ -0.48
CXCL12-205ENST00000395794 ZIC4Q8N9L1 334 aa12.08□□□□□ -0.48
CXCL12-205ENST00000395794 IGFBPL1Q8WX77 278 aa12.08□□□□□ -0.48
CXCL12-205ENST00000395794 ANKRD27Q96NW4 1050 aa12.08□□□□□ -0.48
CXCL12-205ENST00000395794 ZNF385AQ96PM9 386 aaKnown RBP12.08□□□□□ -0.48
CXCL12-205ENST00000395794 EPYCQ99645 322 aa12.08□□□□□ -0.48
CXCL12-205ENST00000395794 CGREF1Q99674 301 aa12.08□□□□□ -0.48
CXCL12-205ENST00000395794 C1QTNF6Q9BXI9 259 aa12.08□□□□□ -0.48
CXCL12-205ENST00000395794 NPAP1Q9NZP6 1156 aa12.08□□□□□ -0.48
CXCL12-205ENST00000395794 VPS13CQ709C8 3753 aa12.07□□□□□ -0.48
CXCL12-205ENST00000395794 TRAV36DV7A0A075B6V5 113 aa12.07□□□□□ -0.48
CXCL12-205ENST00000395794 TRIM64A6NGJ6 449 aa12.07□□□□□ -0.48
CXCL12-205ENST00000395794 TRIM64BA6NI03 449 aa12.07□□□□□ -0.48
CXCL12-205ENST00000395794 SHISA9B4DS77 424 aa12.07□□□□□ -0.48
CXCL12-205ENST00000395794 AIM2O14862 343 aa12.07□□□□□ -0.48
CXCL12-205ENST00000395794 TPST1O60507 370 aa12.07□□□□□ -0.48
CXCL12-205ENST00000395794 SOD3P08294 240 aa12.07□□□□□ -0.48
CXCL12-205ENST00000395794 VIMP08670 466 aaKnown RBP12.07□□□□□ -0.48
CXCL12-205ENST00000395794 DANCRP0C864 163 aa12.07□□□□□ -0.48
CXCL12-205ENST00000395794 CD40P25942 277 aa12.07□□□□□ -0.48
CXCL12-205ENST00000395794 MTPNP58546 118 aa12.07□□□□□ -0.48
CXCL12-205ENST00000395794 MFSD13AQ14CX5 517 aa12.07□□□□□ -0.48
CXCL12-205ENST00000395794 ADRM1Q16186 407 aa12.07□□□□□ -0.48
CXCL12-205ENST00000395794 FAM69AQ5T7M9 428 aa12.07□□□□□ -0.48
CXCL12-205ENST00000395794 KTI12Q96EK9 354 aaPredicted RBP12.07□□□□□ -0.48
CXCL12-205ENST00000395794 COX4I2Q96KJ9 171 aa12.07□□□□□ -0.48
CXCL12-205ENST00000395794 HS6ST2Q96MM7 605 aa12.07□□□□□ -0.48
CXCL12-205ENST00000395794 SMR3AQ99954 134 aa12.07□□□□□ -0.48
CXCL12-205ENST00000395794 SH3GL1Q99961 368 aa12.07□□□□□ -0.48
CXCL12-205ENST00000395794 TMEM120AQ9BXJ8 343 aa12.07□□□□□ -0.48
CXCL12-205ENST00000395794 AMBRA1Q9C0C7 1298 aa12.07□□□□□ -0.48
CXCL12-205ENST00000395794 ZNF385DQ9H6B1 395 aa12.07□□□□□ -0.48
CXCL12-205ENST00000395794 FKRPQ9H9S5 495 aa12.07□□□□□ -0.48
CXCL12-205ENST00000395794 SLC17A5Q9NRA2 495 aa12.07□□□□□ -0.48
CXCL12-205ENST00000395794 B3GALT5Q9Y2C3 310 aa12.07□□□□□ -0.48
CXCL12-205ENST00000395794 SETD2Q9BYW2 2564 aaPredicted RBP12.06□□□□□ -0.48
CXCL12-205ENST00000395794 FTCDNL1E5RQL4 147 aa12.06□□□□□ -0.48
CXCL12-205ENST00000395794 OVOL3O00110 214 aa12.06□□□□□ -0.48
CXCL12-205ENST00000395794 AKAP8O43823 692 aaKnown RBP12.06□□□□□ -0.48
CXCL12-205ENST00000395794 SASH3O75995 380 aa12.06□□□□□ -0.48
CXCL12-205ENST00000395794 MFN2O95140 757 aa12.06□□□□□ -0.48
CXCL12-205ENST00000395794 NQO1P15559 274 aaKnown RBP12.06□□□□□ -0.48
CXCL12-205ENST00000395794 PAX7P23759 505 aa12.06□□□□□ -0.48
CXCL12-205ENST00000395794 HTR2AP28223 471 aa12.06□□□□□ -0.48
CXCL12-205ENST00000395794 CDKN1AP38936 164 aa12.06□□□□□ -0.48
CXCL12-205ENST00000395794 SELENOPP49908 381 aa12.06□□□□□ -0.48
CXCL12-205ENST00000395794 P2RY4P51582 365 aa12.06□□□□□ -0.48
CXCL12-205ENST00000395794 FOXG1P55316 489 aaPredicted RBP12.06□□□□□ -0.48
CXCL12-205ENST00000395794 CLDN17P56750 224 aa12.06□□□□□ -0.48
CXCL12-205ENST00000395794 UBE2NP61088 152 aaKnown RBP12.06□□□□□ -0.48
CXCL12-205ENST00000395794 EGR4Q05215 589 aa12.06□□□□□ -0.48
CXCL12-205ENST00000395794 CYLC2Q14093 348 aaPredicted RBP12.06□□□□□ -0.48
CXCL12-205ENST00000395794 OR1Q1Q15612 314 aa12.06□□□□□ -0.48
CXCL12-205ENST00000395794 MMEL1Q495T6 779 aa12.06□□□□□ -0.48
CXCL12-205ENST00000395794 GLIPR1L2Q4G1C9 344 aa12.06□□□□□ -0.48
CXCL12-205ENST00000395794 HSP90B2PQ58FF3 399 aa12.06□□□□□ -0.48
CXCL12-205ENST00000395794 INTS11Q5TA45 600 aaKnown RBP12.06□□□□□ -0.48
CXCL12-205ENST00000395794 HMBOX1Q6NT76 420 aa12.06□□□□□ -0.48
CXCL12-205ENST00000395794 Q71RC1 249 aaPredicted RBP12.06□□□□□ -0.48
CXCL12-205ENST00000395794 H1FNTQ75WM6 255 aaPredicted RBP12.06□□□□□ -0.48
CXCL12-205ENST00000395794 PATL1Q86TB9 770 aaKnown RBP12.06□□□□□ -0.48
CXCL12-205ENST00000395794 LSRQ86X29 649 aaPredicted RBP12.06□□□□□ -0.48
CXCL12-205ENST00000395794 EPHX4Q8IUS5 362 aa12.06□□□□□ -0.48
CXCL12-205ENST00000395794 FBXL14Q8N1E6 418 aa12.06□□□□□ -0.48
CXCL12-205ENST00000395794 KDM8Q8N371 416 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms