RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 PRSS27Q9BQR3 290 aa14.53□□□□□ -0.08
SMARCD1-202ENST00000394963 SARGQ9BW04 601 aa14.53□□□□□ -0.08
SMARCD1-202ENST00000394963 MED29Q9NX70 200 aa14.53□□□□□ -0.08
SMARCD1-202ENST00000394963 TRIM64CA6NLI5 447 aa14.52□□□□□ -0.08
SMARCD1-202ENST00000394963 CSN2P05814 226 aa14.52□□□□□ -0.08
SMARCD1-202ENST00000394963 GPLD1P80108 840 aa14.52□□□□□ -0.08
SMARCD1-202ENST00000394963 CFHR1Q03591 330 aa14.52□□□□□ -0.08
SMARCD1-202ENST00000394963 NIPAL3Q6P499 406 aa14.52□□□□□ -0.08
SMARCD1-202ENST00000394963 CORO6Q6QEF8 472 aa14.52□□□□□ -0.08
SMARCD1-202ENST00000394963 ZNF322Q6U7Q0 402 aaPredicted RBP14.52□□□□□ -0.08
SMARCD1-202ENST00000394963 TOR1AIP2Q8NFQ8 470 aa14.52□□□□□ -0.08
SMARCD1-202ENST00000394963 NR4A3Q92570 626 aa14.52□□□□□ -0.08
SMARCD1-202ENST00000394963 DCLRE1CQ96SD1 692 aaKnown RBP14.52□□□□□ -0.08
SMARCD1-202ENST00000394963 NPFFR2Q9Y5X5 522 aa14.52□□□□□ -0.08
SMARCD1-202ENST00000394963 A0A0B4J2E0 115 aa14.52□□□□□ -0.09
SMARCD1-202ENST00000394963 A0A1B0GX12 115 aa14.52□□□□□ -0.09
SMARCD1-202ENST00000394963 PPM1BO75688 479 aa14.52□□□□□ -0.09
SMARCD1-202ENST00000394963 CELA2AP08217 269 aa14.52□□□□□ -0.09
SMARCD1-202ENST00000394963 SNRPBP14678 240 aaKnown RBP14.52□□□□□ -0.09
SMARCD1-202ENST00000394963 CD97P48960 835 aa14.52□□□□□ -0.09
SMARCD1-202ENST00000394963 GDI2P50395 445 aaKnown RBP14.52□□□□□ -0.09
SMARCD1-202ENST00000394963 TLE3Q04726 772 aa14.52□□□□□ -0.09
SMARCD1-202ENST00000394963 MGAT2Q10469 447 aa14.52□□□□□ -0.09
SMARCD1-202ENST00000394963 ANGPT1Q15389 498 aa14.52□□□□□ -0.09
SMARCD1-202ENST00000394963 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.52□□□□□ -0.09
SMARCD1-202ENST00000394963 PRAMEF8Q5VWM4 474 aa14.52□□□□□ -0.09
SMARCD1-202ENST00000394963 PRAMEF7Q5VXH5 474 aa14.52□□□□□ -0.09
SMARCD1-202ENST00000394963 GCDHQ92947 438 aaPredicted RBP14.52□□□□□ -0.09
SMARCD1-202ENST00000394963 C3orf49Q96BT1 292 aa14.52□□□□□ -0.09
SMARCD1-202ENST00000394963 DUSP23Q9BVJ7 150 aa14.52□□□□□ -0.09
SMARCD1-202ENST00000394963 SLC39A1Q9NY26 324 aa14.52□□□□□ -0.09
SMARCD1-202ENST00000394963 NLKQ9UBE8 527 aa14.52□□□□□ -0.09
SMARCD1-202ENST00000394963 H0YIG0 161 aa14.52□□□□□ -0.09
SMARCD1-202ENST00000394963 GIMD1P0DJR0 217 aa14.52□□□□□ -0.09
SMARCD1-202ENST00000394963 OR2B6P58173 313 aa14.52□□□□□ -0.09
SMARCD1-202ENST00000394963 ADAM8P78325 824 aa14.52□□□□□ -0.09
SMARCD1-202ENST00000394963 IFITM3Q01628 133 aa14.52□□□□□ -0.09
SMARCD1-202ENST00000394963 C17orf47Q8NEP4 570 aa14.52□□□□□ -0.09
SMARCD1-202ENST00000394963 NXPE2Q96DL1 559 aa14.52□□□□□ -0.09
SMARCD1-202ENST00000394963 DOK1Q99704 481 aa14.52□□□□□ -0.09
SMARCD1-202ENST00000394963 SLITRK2Q9H156 845 aa14.52□□□□□ -0.09
SMARCD1-202ENST00000394963 TSPAN10Q9H1Z9 355 aaPredicted RBP14.52□□□□□ -0.09
SMARCD1-202ENST00000394963 ZNF337Q9Y3M9 751 aa14.52□□□□□ -0.09
SMARCD1-202ENST00000394963 ANXA2P2A6NMY6 339 aa14.51□□□□□ -0.09
SMARCD1-202ENST00000394963 AKR7A3O95154 331 aa14.51□□□□□ -0.09
SMARCD1-202ENST00000394963 ANXA2P07355 339 aaKnown RBP14.51□□□□□ -0.09
SMARCD1-202ENST00000394963 PPICP45877 212 aa14.51□□□□□ -0.09
SMARCD1-202ENST00000394963 ZNF117Q03924 483 aa14.51□□□□□ -0.09
SMARCD1-202ENST00000394963 RPL18Q07020 188 aaKnown RBP14.51□□□□□ -0.09
SMARCD1-202ENST00000394963 DOC2BQ14184 412 aa14.51□□□□□ -0.09
SMARCD1-202ENST00000394963 DNAAF1Q8NEP3 725 aa14.51□□□□□ -0.09
SMARCD1-202ENST00000394963 PELOQ9BRX2 385 aaKnown RBP14.51□□□□□ -0.09
SMARCD1-202ENST00000394963 ADAM30Q9UKF2 790 aa14.51□□□□□ -0.09
SMARCD1-202ENST00000394963 KLK4Q9Y5K2 254 aa14.51□□□□□ -0.09
SMARCD1-202ENST00000394963 MEIS3P1A6NDR6 274 aa14.51□□□□□ -0.09
SMARCD1-202ENST00000394963 SRYQ05066 204 aa14.51□□□□□ -0.09
SMARCD1-202ENST00000394963 MUC6Q6W4X9 2439 aa14.51□□□□□ -0.09
SMARCD1-202ENST00000394963 GLCCI1Q86VQ1 547 aa14.51□□□□□ -0.09
SMARCD1-202ENST00000394963 OSGIN1Q9UJX0 560 aa14.51□□□□□ -0.09
SMARCD1-202ENST00000394963 PCDHGB1Q9Y5G3 927 aa14.51□□□□□ -0.09
SMARCD1-202ENST00000394963 TNRC18O15417 2968 aaPredicted RBP14.51□□□□□ -0.09
SMARCD1-202ENST00000394963 LOC100509620A0A075B734 347 aa14.51□□□□□ -0.09
SMARCD1-202ENST00000394963 TMED7-TICAM2A0A0A6YYA0 188 aa14.51□□□□□ -0.09
SMARCD1-202ENST00000394963 OR6C68A6NDL8 312 aa14.51□□□□□ -0.09
SMARCD1-202ENST00000394963 UPK1BO75841 260 aa14.51□□□□□ -0.09
SMARCD1-202ENST00000394963 TMEM44Q2T9K0 475 aa14.51□□□□□ -0.09
SMARCD1-202ENST00000394963 C3orf38Q5JPI3 329 aa14.51□□□□□ -0.09
SMARCD1-202ENST00000394963 GALNT6Q8NCL4 622 aa14.51□□□□□ -0.09
SMARCD1-202ENST00000394963 ZNF417Q8TAU3 575 aa14.51□□□□□ -0.09
SMARCD1-202ENST00000394963 ZNF587Q96SQ5 575 aaPredicted RBP14.51□□□□□ -0.09
SMARCD1-202ENST00000394963 CMC2Q9NRP2 79 aa14.51□□□□□ -0.09
SMARCD1-202ENST00000394963 SATB2Q9UPW6 733 aa14.51□□□□□ -0.09
SMARCD1-202ENST00000394963 TMED7Q9Y3B3 224 aa14.51□□□□□ -0.09
SMARCD1-202ENST00000394963 RALGAPA1Q6GYQ0 2036 aa14.5□□□□□ -0.09
SMARCD1-202ENST00000394963 ZNF670-ZNF695F2Z2N8 137 aa14.5□□□□□ -0.09
SMARCD1-202ENST00000394963 SLC37A1P57057 533 aa14.5□□□□□ -0.09
SMARCD1-202ENST00000394963 CAMK2DQ13557 499 aa14.5□□□□□ -0.09
SMARCD1-202ENST00000394963 TMEM176BQ3YBM2 270 aaPredicted RBP14.5□□□□□ -0.09
SMARCD1-202ENST00000394963 LCN1P1Q5VSP4 162 aa14.5□□□□□ -0.09
SMARCD1-202ENST00000394963 EEF1A1P5Q5VTE0 462 aa14.5□□□□□ -0.09
SMARCD1-202ENST00000394963 TMEM71Q6P5X7 295 aa14.5□□□□□ -0.09
SMARCD1-202ENST00000394963 SSX6Q7RTT6 188 aa14.5□□□□□ -0.09
SMARCD1-202ENST00000394963 TMPRSS12Q86WS5 348 aa14.5□□□□□ -0.09
SMARCD1-202ENST00000394963 RNF113BQ8IZP6 322 aaKnown RBP14.5□□□□□ -0.09
SMARCD1-202ENST00000394963 MRPL48Q96GC5 212 aaKnown RBP14.5□□□□□ -0.09
SMARCD1-202ENST00000394963 NEDD4LQ96PU5 975 aa14.5□□□□□ -0.09
SMARCD1-202ENST00000394963 WWTR1Q9GZV5 400 aa14.5□□□□□ -0.09
SMARCD1-202ENST00000394963 EXO5Q9H790 373 aa14.5□□□□□ -0.09
SMARCD1-202ENST00000394963 SRPK3Q9UPE1 567 aa14.5□□□□□ -0.09
SMARCD1-202ENST00000394963 A0A1W2PQM1 296 aa14.5□□□□□ -0.09
SMARCD1-202ENST00000394963 SAGE2PA6NJ88 616 aa14.5□□□□□ -0.09
SMARCD1-202ENST00000394963 CD3GP09693 182 aa14.5□□□□□ -0.09
SMARCD1-202ENST00000394963 TCN2P20062 427 aa14.5□□□□□ -0.09
SMARCD1-202ENST00000394963 TBXA2RP21731 343 aa14.5□□□□□ -0.09
SMARCD1-202ENST00000394963 EPHA8P29322 1005 aaPredicted RBP14.5□□□□□ -0.09
SMARCD1-202ENST00000394963 ACAA2P42765 397 aaKnown RBP14.5□□□□□ -0.09
SMARCD1-202ENST00000394963 ETFDHQ16134 617 aa14.5□□□□□ -0.09
SMARCD1-202ENST00000394963 PLK5Q496M5 336 aa14.5□□□□□ -0.09
SMARCD1-202ENST00000394963 NIPAL1Q6NVV3 410 aa14.5□□□□□ -0.09
SMARCD1-202ENST00000394963 AKAP14Q86UN6 197 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms