RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 GZMMP51124 257 aa7.75□□□□□ -1.17
ATG4A-205ENST00000394892 MAP2K6P52564 334 aa7.75□□□□□ -1.17
ATG4A-205ENST00000394892 ATP5J2P56134 94 aa7.75□□□□□ -1.17
ATG4A-205ENST00000394892 PCBP3P57721 371 aaKnown RBP7.75□□□□□ -1.17
ATG4A-205ENST00000394892 RPS4XP62701 263 aaKnown RBP7.75□□□□□ -1.17
ATG4A-205ENST00000394892 CDK6Q00534 326 aa7.75□□□□□ -1.17
ATG4A-205ENST00000394892 GNA13Q14344 377 aa7.75□□□□□ -1.17
ATG4A-205ENST00000394892 LARS2Q15031 903 aaKnown RBP7.75□□□□□ -1.17
ATG4A-205ENST00000394892 NPTX1Q15818 432 aa7.75□□□□□ -1.17
ATG4A-205ENST00000394892 HIKESHIQ53FT3 197 aa7.75□□□□□ -1.17
ATG4A-205ENST00000394892 GCNT6Q5T4J0 391 aa7.75□□□□□ -1.17
ATG4A-205ENST00000394892 CGB2Q6NT52 195 aa7.75□□□□□ -1.17
ATG4A-205ENST00000394892 CREB3L2Q70SY1 520 aa7.75□□□□□ -1.17
ATG4A-205ENST00000394892 P2RY8Q86VZ1 359 aa7.75□□□□□ -1.17
ATG4A-205ENST00000394892 GOLGA6L1Q8N7Z2 621 aa7.75□□□□□ -1.17
ATG4A-205ENST00000394892 GPR32P1Q8NGA4 272 aa7.75□□□□□ -1.17
ATG4A-205ENST00000394892 BBS10Q8TAM1 723 aa7.75□□□□□ -1.17
ATG4A-205ENST00000394892 STK35Q8TDR2 534 aa7.75□□□□□ -1.17
ATG4A-205ENST00000394892 TMEM158Q8WZ71 300 aa7.75□□□□□ -1.17
ATG4A-205ENST00000394892 FBXW5Q969U6 566 aa7.75□□□□□ -1.17
ATG4A-205ENST00000394892 ZHX1-C8orf76Q96EF9 292 aa7.75□□□□□ -1.17
ATG4A-205ENST00000394892 ZNF837Q96EG3 531 aaPredicted RBP7.75□□□□□ -1.17
ATG4A-205ENST00000394892 BOD1Q96IK1 185 aa7.75□□□□□ -1.17
ATG4A-205ENST00000394892 USB1Q9BQ65 265 aaKnown RBP7.75□□□□□ -1.17
ATG4A-205ENST00000394892 SF3B5Q9BWJ5 86 aaKnown RBP7.75□□□□□ -1.17
ATG4A-205ENST00000394892 TMEM38AQ9H6F2 299 aa7.75□□□□□ -1.17
ATG4A-205ENST00000394892 ESRP2Q9H6T0 727 aaKnown RBP7.75□□□□□ -1.17
ATG4A-205ENST00000394892 SEC61A2Q9H9S3 476 aa7.75□□□□□ -1.17
ATG4A-205ENST00000394892 INTS9Q9NV88 658 aaKnown RBP7.75□□□□□ -1.17
ATG4A-205ENST00000394892 ZNF446Q9NWS9 450 aa7.75□□□□□ -1.17
ATG4A-205ENST00000394892 ADPRHL2Q9NX46 363 aa7.75□□□□□ -1.17
ATG4A-205ENST00000394892 THUMPD1Q9NXG2 353 aaKnown RBP7.75□□□□□ -1.17
ATG4A-205ENST00000394892 CISD1Q9NZ45 108 aaKnown RBP7.75□□□□□ -1.17
ATG4A-205ENST00000394892 DCTN4Q9UJW0 460 aa7.75□□□□□ -1.17
ATG4A-205ENST00000394892 SLC9A8Q9Y2E8 581 aa7.75□□□□□ -1.17
ATG4A-205ENST00000394892 IFT52Q9Y366 437 aa7.75□□□□□ -1.17
ATG4A-205ENST00000394892 CIB4A0PJX0 185 aa7.74□□□□□ -1.17
ATG4A-205ENST00000394892 HMGB1P1B2RPK0 211 aaPredicted RBP7.74□□□□□ -1.17
ATG4A-205ENST00000394892 LRRN3E7EW58 273 aa7.74□□□□□ -1.17
ATG4A-205ENST00000394892 MFN2O95140 757 aa7.74□□□□□ -1.17
ATG4A-205ENST00000394892 LGI1O95970 557 aa7.74□□□□□ -1.17
ATG4A-205ENST00000394892 HLA-DOBP13765 273 aa7.74□□□□□ -1.17
ATG4A-205ENST00000394892 NCF2P19878 526 aaPredicted RBP7.74□□□□□ -1.17
ATG4A-205ENST00000394892 AQP1P29972 269 aa7.74□□□□□ -1.17
ATG4A-205ENST00000394892 RPS5P46782 204 aaKnown RBP7.74□□□□□ -1.17
ATG4A-205ENST00000394892 CDH11P55287 796 aa7.74□□□□□ -1.17
ATG4A-205ENST00000394892 IRX1P78414 480 aaPredicted RBP7.74□□□□□ -1.17
ATG4A-205ENST00000394892 SCARB2Q14108 478 aa7.74□□□□□ -1.17
ATG4A-205ENST00000394892 SQLEQ14534 574 aa7.74□□□□□ -1.17
ATG4A-205ENST00000394892 DUSP7Q16829 419 aa7.74□□□□□ -1.17
ATG4A-205ENST00000394892 MST1LQ2TV78 715 aa7.74□□□□□ -1.17
ATG4A-205ENST00000394892 PHYHD1Q5SRE7 291 aa7.74□□□□□ -1.17
ATG4A-205ENST00000394892 HMBOX1Q6NT76 420 aa7.74□□□□□ -1.17
ATG4A-205ENST00000394892 REEP3Q6NUK4 255 aa7.74□□□□□ -1.17
ATG4A-205ENST00000394892 WDR88Q6ZMY6 472 aa7.74□□□□□ -1.17
ATG4A-205ENST00000394892 AAED1Q7RTV5 226 aa7.74□□□□□ -1.17
ATG4A-205ENST00000394892 MYPOPQ86VE0 399 aaPredicted RBP7.74□□□□□ -1.17
ATG4A-205ENST00000394892 RBM45Q8IUH3 476 aaKnown RBP7.74□□□□□ -1.17
ATG4A-205ENST00000394892 DPP10Q8N608 796 aa7.74□□□□□ -1.17
ATG4A-205ENST00000394892 LSMEM1Q8N8F7 131 aa7.74□□□□□ -1.17
ATG4A-205ENST00000394892 MFSD8Q8NHS3 518 aa7.74□□□□□ -1.17
ATG4A-205ENST00000394892 STON2Q8WXE9 905 aa7.74□□□□□ -1.17
ATG4A-205ENST00000394892 HTRA1Q92743 480 aa7.74□□□□□ -1.17
ATG4A-205ENST00000394892 BCL2L2Q92843 193 aaPredicted RBP7.74□□□□□ -1.17
ATG4A-205ENST00000394892 SLC35B4Q969S0 331 aa7.74□□□□□ -1.17
ATG4A-205ENST00000394892 MUCL1Q96DR8 90 aa7.74□□□□□ -1.17
ATG4A-205ENST00000394892 TRMT61AQ96FX7 289 aaKnown RBP7.74□□□□□ -1.17
ATG4A-205ENST00000394892 MAGEB18Q96M61 343 aa7.74□□□□□ -1.17
ATG4A-205ENST00000394892 CGREF1Q99674 301 aa7.74□□□□□ -1.17
ATG4A-205ENST00000394892 NAA11Q9BSU3 229 aaPredicted RBP7.74□□□□□ -1.17
ATG4A-205ENST00000394892 SLCO5A1Q9H2Y9 848 aa7.74□□□□□ -1.17
ATG4A-205ENST00000394892 VIPAS39Q9H9C1 493 aa7.74□□□□□ -1.17
ATG4A-205ENST00000394892 TMEM45AQ9NWC5 275 aa7.74□□□□□ -1.17
ATG4A-205ENST00000394892 KLHL14Q9P2G3 628 aa7.74□□□□□ -1.17
ATG4A-205ENST00000394892 ADAM21Q9UKJ8 722 aa7.74□□□□□ -1.17
ATG4A-205ENST00000394892 PRDM4Q9UKN5 801 aa7.74□□□□□ -1.17
ATG4A-205ENST00000394892 ZNF232Q9UNY5 417 aa7.74□□□□□ -1.17
ATG4A-205ENST00000394892 USP22Q9UPT9 525 aa7.74□□□□□ -1.17
ATG4A-205ENST00000394892 B3GALT5Q9Y2C3 310 aa7.74□□□□□ -1.17
ATG4A-205ENST00000394892 A0A0B4J2E0 115 aa7.73□□□□□ -1.17
ATG4A-205ENST00000394892 A0A1B0GX12 115 aa7.73□□□□□ -1.17
ATG4A-205ENST00000394892 RNF223E7ERA6 249 aa7.73□□□□□ -1.17
ATG4A-205ENST00000394892 MS4A18H0YCH9 400 aa7.73□□□□□ -1.17
ATG4A-205ENST00000394892 M0R082 166 aa7.73□□□□□ -1.17
ATG4A-205ENST00000394892 M0R1B8 84 aa7.73□□□□□ -1.17
ATG4A-205ENST00000394892 FXYD1O00168 92 aa7.73□□□□□ -1.17
ATG4A-205ENST00000394892 TRAF3IP2O43734 574 aaPredicted RBP7.73□□□□□ -1.17
ATG4A-205ENST00000394892 BGLAPP02818 100 aa7.73□□□□□ -1.17
ATG4A-205ENST00000394892 OPN1SWP03999 348 aa7.73□□□□□ -1.17
ATG4A-205ENST00000394892 CD247P20963 164 aa7.73□□□□□ -1.17
ATG4A-205ENST00000394892 CBLP22681 906 aa7.73□□□□□ -1.17
ATG4A-205ENST00000394892 MPGP29372 298 aa7.73□□□□□ -1.17
ATG4A-205ENST00000394892 GRPRP30550 384 aa7.73□□□□□ -1.17
ATG4A-205ENST00000394892 TTKP33981 857 aa7.73□□□□□ -1.17
ATG4A-205ENST00000394892 MTPNP58546 118 aa7.73□□□□□ -1.17
ATG4A-205ENST00000394892 STX1BP61266 288 aa7.73□□□□□ -1.17
ATG4A-205ENST00000394892 COPZ1P61923 177 aa7.73□□□□□ -1.17
ATG4A-205ENST00000394892 TUBA1BP68363 451 aa7.73□□□□□ -1.17
ATG4A-205ENST00000394892 TUBA4AP68366 448 aa7.73□□□□□ -1.17
ATG4A-205ENST00000394892 SF3A3Q12874 501 aaKnown RBP eCLIP7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms