RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 RNF166Q96A37 237 aaPredicted RBP12.33□□□□□ -0.44
GTF2F1-201ENST00000394456 DACT3Q96B18 629 aaPredicted RBP12.33□□□□□ -0.44
GTF2F1-201ENST00000394456 Q96M85 177 aa12.33□□□□□ -0.44
GTF2F1-201ENST00000394456 HSPA12BQ96MM6 686 aa12.33□□□□□ -0.44
GTF2F1-201ENST00000394456 VSTM2LQ96N03 204 aa12.33□□□□□ -0.44
GTF2F1-201ENST00000394456 MAP3K3Q99759 626 aa12.33□□□□□ -0.44
GTF2F1-201ENST00000394456 SEMA6CQ9H3T2 930 aa12.33□□□□□ -0.44
GTF2F1-201ENST00000394456 NIPAL2Q9H841 368 aa12.33□□□□□ -0.44
GTF2F1-201ENST00000394456 ICAM5Q9UMF0 924 aa12.33□□□□□ -0.44
GTF2F1-201ENST00000394456 ERVK-19Q9WJR5 959 aa12.33□□□□□ -0.44
GTF2F1-201ENST00000394456 CLDN16Q9Y5I7 305 aa12.33□□□□□ -0.44
GTF2F1-201ENST00000394456 CHURC1-FNTBB4DL54 471 aa12.32□□□□□ -0.44
GTF2F1-201ENST00000394456 DCTN6O00399 190 aa12.32□□□□□ -0.44
GTF2F1-201ENST00000394456 ZNF217O75362 1048 aa12.32□□□□□ -0.44
GTF2F1-201ENST00000394456 HPXP02790 462 aa12.32□□□□□ -0.44
GTF2F1-201ENST00000394456 CT45A8P0DMV1 189 aa12.32□□□□□ -0.44
GTF2F1-201ENST00000394456 CT45A9P0DMV2 189 aa12.32□□□□□ -0.44
GTF2F1-201ENST00000394456 CD38P28907 300 aa12.32□□□□□ -0.44
GTF2F1-201ENST00000394456 SSTR2P30874 369 aa12.32□□□□□ -0.44
GTF2F1-201ENST00000394456 ODF4Q2M2E3 257 aa12.32□□□□□ -0.44
GTF2F1-201ENST00000394456 CT45A2Q5DJT8 189 aa12.32□□□□□ -0.44
GTF2F1-201ENST00000394456 TIGD3Q6B0B8 471 aa12.32□□□□□ -0.44
GTF2F1-201ENST00000394456 TOMM5Q8N4H5 51 aa12.32□□□□□ -0.44
GTF2F1-201ENST00000394456 SMIM19Q96E16 107 aa12.32□□□□□ -0.44
GTF2F1-201ENST00000394456 SCMH1Q96GD3 660 aa12.32□□□□□ -0.44
GTF2F1-201ENST00000394456 CNN2Q99439 309 aaKnown RBP12.32□□□□□ -0.44
GTF2F1-201ENST00000394456 CACNG6Q9BXT2 260 aa12.32□□□□□ -0.44
GTF2F1-201ENST00000394456 ING1Q9UK53 422 aaPredicted RBP12.32□□□□□ -0.44
GTF2F1-201ENST00000394456 WDFY4Q6ZS81 3184 aa12.32□□□□□ -0.44
GTF2F1-201ENST00000394456 BLOC1S5-TXNDC5H3BN57 136 aa12.32□□□□□ -0.44
GTF2F1-201ENST00000394456 OGG1O15527 345 aa12.32□□□□□ -0.44
GTF2F1-201ENST00000394456 FLRT2O43155 660 aa12.32□□□□□ -0.44
GTF2F1-201ENST00000394456 FCER2P06734 321 aa12.32□□□□□ -0.44
GTF2F1-201ENST00000394456 SLC35E2P0CK97 266 aa12.32□□□□□ -0.44
GTF2F1-201ENST00000394456 SPI1P17947 270 aa12.32□□□□□ -0.44
GTF2F1-201ENST00000394456 AQP2P41181 271 aa12.32□□□□□ -0.44
GTF2F1-201ENST00000394456 CDKN2AP42771 156 aaKnown RBP12.32□□□□□ -0.44
GTF2F1-201ENST00000394456 RAB38P57729 211 aa12.32□□□□□ -0.44
GTF2F1-201ENST00000394456 KCNAB1Q14722 419 aa12.32□□□□□ -0.44
GTF2F1-201ENST00000394456 CD226Q15762 336 aa12.32□□□□□ -0.44
GTF2F1-201ENST00000394456 PYHIN1Q6K0P9 492 aa12.32□□□□□ -0.44
GTF2F1-201ENST00000394456 CBLN3Q6UW01 205 aa12.32□□□□□ -0.44
GTF2F1-201ENST00000394456 LINC00114Q6XXX2 140 aa12.32□□□□□ -0.44
GTF2F1-201ENST00000394456 PRR23CQ6ZRP0 262 aa12.32□□□□□ -0.44
GTF2F1-201ENST00000394456 DNAAF1Q8NEP3 725 aa12.32□□□□□ -0.44
GTF2F1-201ENST00000394456 HAVCR2Q8TDQ0 301 aa12.32□□□□□ -0.44
GTF2F1-201ENST00000394456 WDR89Q96FK6 387 aaPredicted RBP12.32□□□□□ -0.44
GTF2F1-201ENST00000394456 FOXN4Q96NZ1 517 aa12.32□□□□□ -0.44
GTF2F1-201ENST00000394456 MOGAT1Q96PD6 335 aa12.32□□□□□ -0.44
GTF2F1-201ENST00000394456 MGAT4AQ9UM21 535 aa12.32□□□□□ -0.44
GTF2F1-201ENST00000394456 IGKV1D-42A0A075B6H8 117 aa12.31□□□□□ -0.44
GTF2F1-201ENST00000394456 TOXO94900 526 aa12.31□□□□□ -0.44
GTF2F1-201ENST00000394456 NDUFB2O95178 105 aa12.31□□□□□ -0.44
GTF2F1-201ENST00000394456 F13BP05160 661 aa12.31□□□□□ -0.44
GTF2F1-201ENST00000394456 STX4Q12846 297 aa12.31□□□□□ -0.44
GTF2F1-201ENST00000394456 DEFB133Q30KQ1 61 aa12.31□□□□□ -0.44
GTF2F1-201ENST00000394456 ARHGAP11AQ6P4F7 1023 aa12.31□□□□□ -0.44
GTF2F1-201ENST00000394456 MCATQ8IVS2 390 aaKnown RBP12.31□□□□□ -0.44
GTF2F1-201ENST00000394456 ARHGEF39Q8N4T4 335 aa12.31□□□□□ -0.44
GTF2F1-201ENST00000394456 C16orf52Q8NHV5 167 aa12.31□□□□□ -0.44
GTF2F1-201ENST00000394456 ZNF671Q8TAW3 534 aa12.31□□□□□ -0.44
GTF2F1-201ENST00000394456 SGTBQ96EQ0 304 aa12.31□□□□□ -0.44
GTF2F1-201ENST00000394456 ELF4Q99607 663 aaPredicted RBP12.31□□□□□ -0.44
GTF2F1-201ENST00000394456 GTPBP2Q9BX10 602 aaKnown RBP12.31□□□□□ -0.44
GTF2F1-201ENST00000394456 GON7Q9BXV9 100 aa12.31□□□□□ -0.44
GTF2F1-201ENST00000394456 INPP5EQ9NRR6 644 aa12.31□□□□□ -0.44
GTF2F1-201ENST00000394456 UCKL1Q9NWZ5 548 aa12.31□□□□□ -0.44
GTF2F1-201ENST00000394456 SERTAD3Q9UJW9 196 aa12.31□□□□□ -0.44
GTF2F1-201ENST00000394456 CSTAP01040 98 aa12.31□□□□□ -0.44
GTF2F1-201ENST00000394456 OR8G3PP0DMU2 310 aa12.31□□□□□ -0.44
GTF2F1-201ENST00000394456 CD27P26842 260 aa12.31□□□□□ -0.44
GTF2F1-201ENST00000394456 SOX2P48431 317 aa12.31□□□□□ -0.44
GTF2F1-201ENST00000394456 CCR4P51679 360 aa12.31□□□□□ -0.44
GTF2F1-201ENST00000394456 RPL6Q02878 288 aaKnown RBP12.31□□□□□ -0.44
GTF2F1-201ENST00000394456 SMAD2Q15796 467 aaKnown RBP12.31□□□□□ -0.44
GTF2F1-201ENST00000394456 RPL13AP3Q6NVV1 102 aa12.31□□□□□ -0.44
GTF2F1-201ENST00000394456 TPRA1Q86W33 373 aa12.31□□□□□ -0.44
GTF2F1-201ENST00000394456 PLCZ1Q86YW0 608 aa12.31□□□□□ -0.44
GTF2F1-201ENST00000394456 CEP76Q8TAP6 659 aa12.31□□□□□ -0.44
GTF2F1-201ENST00000394456 GIMAP1Q8WWP7 306 aa12.31□□□□□ -0.44
GTF2F1-201ENST00000394456 KCTD12Q96CX2 325 aaKnown RBP12.31□□□□□ -0.44
GTF2F1-201ENST00000394456 RBM18Q96H35 190 aaKnown RBP12.31□□□□□ -0.44
GTF2F1-201ENST00000394456 OR51J1Q9H342 316 aa12.31□□□□□ -0.44
GTF2F1-201ENST00000394456 HAO2Q9NYQ3 351 aa12.31□□□□□ -0.44
GTF2F1-201ENST00000394456 RPS6KB2Q9UBS0 482 aa12.31□□□□□ -0.44
GTF2F1-201ENST00000394456 WDFY3Q8IZQ1 3526 aa12.31□□□□□ -0.44
GTF2F1-201ENST00000394456 TVP23AA6NH52 213 aa12.31□□□□□ -0.44
GTF2F1-201ENST00000394456 A8MUA0 341 aa12.31□□□□□ -0.44
GTF2F1-201ENST00000394456 METTL12A8MUP2 240 aa12.31□□□□□ -0.44
GTF2F1-201ENST00000394456 IFNGP01579 166 aa12.31□□□□□ -0.44
GTF2F1-201ENST00000394456 UCHL1P09936 223 aa12.31□□□□□ -0.44
GTF2F1-201ENST00000394456 TMIGD3P0DMS9 266 aaPredicted RBP12.31□□□□□ -0.44
GTF2F1-201ENST00000394456 GFERP55789 205 aa12.31□□□□□ -0.44
GTF2F1-201ENST00000394456 GNG2P59768 71 aa12.31□□□□□ -0.44
GTF2F1-201ENST00000394456 ELOCQ15369 112 aa12.31□□□□□ -0.44
GTF2F1-201ENST00000394456 HYAL4Q2M3T9 481 aa12.31□□□□□ -0.44
GTF2F1-201ENST00000394456 APOOLQ6UXV4 268 aa12.31□□□□□ -0.44
GTF2F1-201ENST00000394456 BCORP1Q8N888 145 aa12.31□□□□□ -0.44
GTF2F1-201ENST00000394456 OR8H1Q8NGG4 311 aa12.31□□□□□ -0.44
GTF2F1-201ENST00000394456 OR10AC1Q8NH08 325 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms