RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 PMEPA1Q969W9 287 aa13.7□□□□□ -0.22
GPC3-202ENST00000394299 NEURL2Q9BR09 285 aa13.7□□□□□ -0.22
GPC3-202ENST00000394299 TMEM43Q9BTV4 400 aa13.7□□□□□ -0.22
GPC3-202ENST00000394299 MED18Q9BUE0 208 aa13.7□□□□□ -0.22
GPC3-202ENST00000394299 SLC19A3Q9BZV2 496 aa13.7□□□□□ -0.22
GPC3-202ENST00000394299 TGIF2Q9GZN2 237 aa13.7□□□□□ -0.22
GPC3-202ENST00000394299 SRA1Q9HD15 236 aaKnown RBP13.7□□□□□ -0.22
GPC3-202ENST00000394299 TECTAO75443 2155 aa13.7□□□□□ -0.22
GPC3-202ENST00000394299 SAGE2PA6NJ88 616 aa13.69□□□□□ -0.22
GPC3-202ENST00000394299 CXCR1P25024 350 aa13.69□□□□□ -0.22
GPC3-202ENST00000394299 EVI2BP34910 448 aa13.69□□□□□ -0.22
GPC3-202ENST00000394299 PNLIPRP2P54317 469 aa13.69□□□□□ -0.22
GPC3-202ENST00000394299 SPATC1Q76KD6 591 aa13.69□□□□□ -0.22
GPC3-202ENST00000394299 FAM122BQ7Z309 247 aa13.69□□□□□ -0.22
GPC3-202ENST00000394299 DIRAS2Q96HU8 199 aa13.69□□□□□ -0.22
GPC3-202ENST00000394299 RNF32Q9H0A6 362 aa13.69□□□□□ -0.22
GPC3-202ENST00000394299 SIAEQ9HAT2 523 aa13.69□□□□□ -0.22
GPC3-202ENST00000394299 GALNT9Q9HCQ5 603 aa13.69□□□□□ -0.22
GPC3-202ENST00000394299 TRIM36Q9NQ86 728 aa13.69□□□□□ -0.22
GPC3-202ENST00000394299 PRMT8Q9NR22 394 aaPredicted RBP13.69□□□□□ -0.22
GPC3-202ENST00000394299 MALT1Q9UDY8 824 aa13.69□□□□□ -0.22
GPC3-202ENST00000394299 KLHL21Q9UJP4 597 aa13.69□□□□□ -0.22
GPC3-202ENST00000394299 HIF3AQ9Y2N7 669 aa13.69□□□□□ -0.22
GPC3-202ENST00000394299 NUP210LQ5VU65 1888 aa13.69□□□□□ -0.22
GPC3-202ENST00000394299 IGLV3-12A0A075B6K2 115 aa13.69□□□□□ -0.22
GPC3-202ENST00000394299 A0A1W2PRG6 482 aa13.69□□□□□ -0.22
GPC3-202ENST00000394299 C11orf98E9PRG8 122 aa13.69□□□□□ -0.22
GPC3-202ENST00000394299 ADAM10O14672 748 aa13.69□□□□□ -0.22
GPC3-202ENST00000394299 ARPC3O15145 178 aa13.69□□□□□ -0.22
GPC3-202ENST00000394299 ALOX12BO75342 701 aa13.69□□□□□ -0.22
GPC3-202ENST00000394299 GPANK1O95872 356 aa13.69□□□□□ -0.22
GPC3-202ENST00000394299 ZNF28P17035 718 aa13.69□□□□□ -0.22
GPC3-202ENST00000394299 PSMB10P40306 273 aa13.69□□□□□ -0.22
GPC3-202ENST00000394299 DIO1P49895 249 aa13.69□□□□□ -0.22
GPC3-202ENST00000394299 RAB15P59190 212 aa13.69□□□□□ -0.22
GPC3-202ENST00000394299 PRPS1P60891 318 aa13.69□□□□□ -0.22
GPC3-202ENST00000394299 DCDP81605 110 aaKnown RBP13.69□□□□□ -0.22
GPC3-202ENST00000394299 SQSTM1Q13501 440 aa13.69□□□□□ -0.22
GPC3-202ENST00000394299 ARMC4Q5T2S8 1044 aa13.69□□□□□ -0.22
GPC3-202ENST00000394299 GDPD3Q7L5L3 318 aa13.69□□□□□ -0.22
GPC3-202ENST00000394299 LSM14AQ8ND56 463 aaKnown RBP13.69□□□□□ -0.22
GPC3-202ENST00000394299 WDR77Q9BQA1 342 aaPredicted RBP13.69□□□□□ -0.22
GPC3-202ENST00000394299 GTPBP2Q9BX10 602 aaKnown RBP13.69□□□□□ -0.22
GPC3-202ENST00000394299 OR11A1Q9GZK7 315 aa13.69□□□□□ -0.22
GPC3-202ENST00000394299 SUSD2Q9UGT4 822 aa13.69□□□□□ -0.22
GPC3-202ENST00000394299 HRH3Q9Y5N1 445 aa13.69□□□□□ -0.22
GPC3-202ENST00000394299 NPFFR2Q9Y5X5 522 aa13.69□□□□□ -0.22
GPC3-202ENST00000394299 A0A087WV48 116 aa13.68□□□□□ -0.22
GPC3-202ENST00000394299 TMEM200CA6NKL6 621 aa13.68□□□□□ -0.22
GPC3-202ENST00000394299 PRR32B1ATL7 298 aa13.68□□□□□ -0.22
GPC3-202ENST00000394299 DLGAP3O95886 979 aa13.68□□□□□ -0.22
GPC3-202ENST00000394299 RPS27P42677 84 aaKnown RBP13.68□□□□□ -0.22
GPC3-202ENST00000394299 EMP2P54851 167 aa13.68□□□□□ -0.22
GPC3-202ENST00000394299 QPRTQ15274 297 aa13.68□□□□□ -0.22
GPC3-202ENST00000394299 ZNF385CQ66K41 422 aaPredicted RBP13.68□□□□□ -0.22
GPC3-202ENST00000394299 PAPD4Q6PIY7 484 aaKnown RBP13.68□□□□□ -0.22
GPC3-202ENST00000394299 FAM131AQ6UXB0 335 aa13.68□□□□□ -0.22
GPC3-202ENST00000394299 C1orf210Q8IVY1 113 aa13.68□□□□□ -0.22
GPC3-202ENST00000394299 SLC35F2Q8IXU6 374 aa13.68□□□□□ -0.22
GPC3-202ENST00000394299 DTX3Q8N9I9 347 aa13.68□□□□□ -0.22
GPC3-202ENST00000394299 ABHD4Q8TB40 342 aa13.68□□□□□ -0.22
GPC3-202ENST00000394299 GHSRQ92847 366 aa13.68□□□□□ -0.22
GPC3-202ENST00000394299 CNN2Q99439 309 aaKnown RBP13.68□□□□□ -0.22
GPC3-202ENST00000394299 ATF6BQ99941 703 aa13.68□□□□□ -0.22
GPC3-202ENST00000394299 NMNAT2Q9BZQ4 307 aa13.68□□□□□ -0.22
GPC3-202ENST00000394299 UGT2A1Q9Y4X1 527 aa13.68□□□□□ -0.22
GPC3-202ENST00000394299 HPGDSO60760 199 aa13.68□□□□□ -0.22
GPC3-202ENST00000394299 RGS9O75916 674 aaPredicted RBP13.68□□□□□ -0.22
GPC3-202ENST00000394299 PLGP00747 810 aaPredicted RBP13.68□□□□□ -0.22
GPC3-202ENST00000394299 CD14P08571 375 aa13.68□□□□□ -0.22
GPC3-202ENST00000394299 ANKRD34CP0C6C1 535 aa13.68□□□□□ -0.22
GPC3-202ENST00000394299 UQCRC1P31930 480 aa13.68□□□□□ -0.22
GPC3-202ENST00000394299 OR10A3P58181 314 aa13.68□□□□□ -0.22
GPC3-202ENST00000394299 DAB2P98082 770 aa13.68□□□□□ -0.22
GPC3-202ENST00000394299 TRIM61Q5EBN2 209 aa13.68□□□□□ -0.22
GPC3-202ENST00000394299 LINC01590Q5TEZ4 76 aa13.68□□□□□ -0.22
GPC3-202ENST00000394299 OVCH1Q7RTY7 1134 aa13.68□□□□□ -0.22
GPC3-202ENST00000394299 SYT9Q86SS6 491 aa13.68□□□□□ -0.22
GPC3-202ENST00000394299 PPP1R3BQ86XI6 285 aa13.68□□□□□ -0.22
GPC3-202ENST00000394299 FAM181AQ8N9Y4 354 aa13.68□□□□□ -0.22
GPC3-202ENST00000394299 PELI1Q96FA3 418 aa13.68□□□□□ -0.22
GPC3-202ENST00000394299 PGLYRP3Q96LB9 341 aa13.68□□□□□ -0.22
GPC3-202ENST00000394299 TSPAN32Q96QS1 320 aa13.68□□□□□ -0.22
GPC3-202ENST00000394299 TEX51A0A1B0GUA7 166 aa13.67□□□□□ -0.22
GPC3-202ENST00000394299 PLPP2O43688 288 aa13.67□□□□□ -0.22
GPC3-202ENST00000394299 RGS19P49795 217 aa13.67□□□□□ -0.22
GPC3-202ENST00000394299 BDH1Q02338 343 aa13.67□□□□□ -0.22
GPC3-202ENST00000394299 TAB1Q15750 504 aa13.67□□□□□ -0.22
GPC3-202ENST00000394299 CEACAM19Q7Z692 300 aa13.67□□□□□ -0.22
GPC3-202ENST00000394299 ADGRG3Q86Y34 549 aa13.67□□□□□ -0.22
GPC3-202ENST00000394299 GPR119Q8TDV5 335 aa13.67□□□□□ -0.22
GPC3-202ENST00000394299 FOXN4Q96NZ1 517 aa13.67□□□□□ -0.22
GPC3-202ENST00000394299 SPSB2Q99619 263 aa13.67□□□□□ -0.22
GPC3-202ENST00000394299 SRRQ9GZT4 340 aa13.67□□□□□ -0.22
GPC3-202ENST00000394299 INPP5EQ9NRR6 644 aa13.67□□□□□ -0.22
GPC3-202ENST00000394299 ACOXLQ9NUZ1 547 aa13.67□□□□□ -0.22
GPC3-202ENST00000394299 TAS2R5Q9NYW4 299 aa13.67□□□□□ -0.22
GPC3-202ENST00000394299 GNG8Q9UK08 70 aa13.67□□□□□ -0.22
GPC3-202ENST00000394299 TBC1D24Q9ULP9 559 aa13.67□□□□□ -0.22
GPC3-202ENST00000394299 TRBV11-1A0A0K0K1C0 115 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms