RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 MRPS22P82650 360 aaKnown RBP3.17□□□□□ -1.9
XRN1-202ENST00000392981 C16orf72Q14CZ0 275 aa3.17□□□□□ -1.9
XRN1-202ENST00000392981 ZNF787Q6DD87 383 aa3.17□□□□□ -1.9
XRN1-202ENST00000392981 LIMS2Q7Z4I7 341 aa3.17□□□□□ -1.9
XRN1-202ENST00000392981 MFSD6LQ8IWD5 586 aa3.17□□□□□ -1.9
XRN1-202ENST00000392981 OR4F6Q8NGB9 312 aa3.17□□□□□ -1.9
XRN1-202ENST00000392981 OR6K6Q8NGW6 343 aa3.17□□□□□ -1.9
XRN1-202ENST00000392981 AENQ8WTP8 325 aaKnown RBP3.17□□□□□ -1.9
XRN1-202ENST00000392981 ASB10Q8WXI3 467 aa3.17□□□□□ -1.9
XRN1-202ENST00000392981 PIK3R3Q92569 461 aa3.17□□□□□ -1.9
XRN1-202ENST00000392981 CENPNQ96H22 339 aaPredicted RBP3.17□□□□□ -1.9
XRN1-202ENST00000392981 TMEM208Q9BTX3 173 aa3.17□□□□□ -1.9
XRN1-202ENST00000392981 TMEM59Q9BXS4 323 aa3.17□□□□□ -1.9
XRN1-202ENST00000392981 VN1R1Q9GZP7 353 aa3.17□□□□□ -1.9
XRN1-202ENST00000392981 DSN1Q9H410 356 aa3.17□□□□□ -1.9
XRN1-202ENST00000392981 PLEKHA1Q9HB21 404 aa3.17□□□□□ -1.9
XRN1-202ENST00000392981 ASIC5Q9NY37 505 aa3.17□□□□□ -1.9
XRN1-202ENST00000392981 IL36AQ9UHA7 158 aa3.17□□□□□ -1.9
XRN1-202ENST00000392981 CLEC4EQ9ULY5 219 aa3.17□□□□□ -1.9
XRN1-202ENST00000392981 HEY1Q9Y5J3 304 aa3.17□□□□□ -1.9
XRN1-202ENST00000392981 SALL1Q9NSC2 1324 aa3.17□□□□□ -1.9
XRN1-202ENST00000392981 PLA2R1Q13018 1463 aa3.17□□□□□ -1.9
XRN1-202ENST00000392981 A0A0G2JLL6 359 aaPredicted RBP3.17□□□□□ -1.9
XRN1-202ENST00000392981 MYOCOSA0A1B0GUC4 107 aa3.17□□□□□ -1.9
XRN1-202ENST00000392981 E5RI56 91 aa3.17□□□□□ -1.9
XRN1-202ENST00000392981 CYB561D2O14569 222 aa3.17□□□□□ -1.9
XRN1-202ENST00000392981 SLC16A7O60669 478 aa3.17□□□□□ -1.9
XRN1-202ENST00000392981 LRCH4O75427 683 aa3.17□□□□□ -1.9
XRN1-202ENST00000392981 APOHP02749 345 aaPredicted RBP3.17□□□□□ -1.9
XRN1-202ENST00000392981 IFNA6P05013 189 aa3.17□□□□□ -1.9
XRN1-202ENST00000392981 RETP07949 1114 aa3.17□□□□□ -1.9
XRN1-202ENST00000392981 EFNB2P52799 333 aa3.17□□□□□ -1.9
XRN1-202ENST00000392981 AP2S1P53680 142 aaPredicted RBP3.17□□□□□ -1.9
XRN1-202ENST00000392981 MAZP56270 477 aaKnown RBP3.17□□□□□ -1.9
XRN1-202ENST00000392981 SEC61BP60468 96 aaKnown RBP3.17□□□□□ -1.9
XRN1-202ENST00000392981 GNGT1P63211 74 aa3.17□□□□□ -1.9
XRN1-202ENST00000392981 GAGE2BQ13066 116 aa3.17□□□□□ -1.9
XRN1-202ENST00000392981 PTGR1Q14914 329 aa3.17□□□□□ -1.9
XRN1-202ENST00000392981 SLC10A1Q14973 349 aa3.17□□□□□ -1.9
XRN1-202ENST00000392981 GAGE2EQ4V326 116 aa3.17□□□□□ -1.9
XRN1-202ENST00000392981 XKR4Q5GH76 650 aa3.17□□□□□ -1.9
XRN1-202ENST00000392981 OTUD3Q5T2D3 398 aaPredicted RBP3.17□□□□□ -1.9
XRN1-202ENST00000392981 SUMO4Q6EEV6 95 aa3.17□□□□□ -1.9
XRN1-202ENST00000392981 GAGE2AQ6NT46 116 aa3.17□□□□□ -1.9
XRN1-202ENST00000392981 CNIH2Q6PI25 160 aa3.17□□□□□ -1.9
XRN1-202ENST00000392981 ZNF562Q6V9R5 426 aa3.17□□□□□ -1.9
XRN1-202ENST00000392981 PIWIL4Q7Z3Z4 852 aaKnown RBP3.17□□□□□ -1.9
XRN1-202ENST00000392981 CLVS1Q8IUQ0 354 aaPredicted RBP3.17□□□□□ -1.9
XRN1-202ENST00000392981 CYB561A3Q8NBI2 242 aa3.17□□□□□ -1.9
XRN1-202ENST00000392981 PRSS3P2Q8NHM4 247 aa3.17□□□□□ -1.9
XRN1-202ENST00000392981 DYNC2LI1Q8TCX1 351 aa3.17□□□□□ -1.9
XRN1-202ENST00000392981 TMED6Q8WW62 240 aa3.17□□□□□ -1.9
XRN1-202ENST00000392981 TESCQ96BS2 214 aa3.17□□□□□ -1.9
XRN1-202ENST00000392981 WFIKKN1Q96NZ8 548 aa3.17□□□□□ -1.9
XRN1-202ENST00000392981 LGMNQ99538 433 aa3.17□□□□□ -1.9
XRN1-202ENST00000392981 TMEM175Q9BSA9 504 aa3.17□□□□□ -1.9
XRN1-202ENST00000392981 RNF146Q9NTX7 359 aa3.17□□□□□ -1.9
XRN1-202ENST00000392981 KCNIP1Q9NZI2 227 aa3.17□□□□□ -1.9
XRN1-202ENST00000392981 GAGE2DQ9UEU5 116 aa3.17□□□□□ -1.9
XRN1-202ENST00000392981 GUCA1BQ9UMX6 200 aa3.17□□□□□ -1.9
XRN1-202ENST00000392981 KCTD3Q9Y597 815 aa3.17□□□□□ -1.9
XRN1-202ENST00000392981 TSSC4Q9Y5U2 329 aaPredicted RBP3.17□□□□□ -1.9
XRN1-202ENST00000392981 MADDQ8WXG6 1647 aa3.17□□□□□ -1.9
XRN1-202ENST00000392981 VPS13AQ96RL7 3174 aa3.17□□□□□ -1.9
XRN1-202ENST00000392981 ATP10BO94823 1461 aa3.17□□□□□ -1.9
XRN1-202ENST00000392981 ABCC1P33527 1531 aa3.17□□□□□ -1.9
XRN1-202ENST00000392981 H7C2Y5 167 aa3.17□□□□□ -1.9
XRN1-202ENST00000392981 SGK494L7N484 410 aa3.17□□□□□ -1.9
XRN1-202ENST00000392981 M0QZ92 97 aa3.17□□□□□ -1.9
XRN1-202ENST00000392981 B4GALT3O60512 393 aa3.17□□□□□ -1.9
XRN1-202ENST00000392981 PLEKHA8P1O95397 391 aa3.17□□□□□ -1.9
XRN1-202ENST00000392981 RPL35AP18077 110 aaKnown RBP3.17□□□□□ -1.9
XRN1-202ENST00000392981 GPD1P21695 349 aa3.17□□□□□ -1.9
XRN1-202ENST00000392981 MPGP29372 298 aa3.17□□□□□ -1.9
XRN1-202ENST00000392981 CRABP2P29373 138 aa3.17□□□□□ -1.9
XRN1-202ENST00000392981 ENPP2Q13822 863 aa3.17□□□□□ -1.9
XRN1-202ENST00000392981 COQ5Q5HYK3 327 aa3.17□□□□□ -1.9
XRN1-202ENST00000392981 WSCD1Q658N2 575 aa3.17□□□□□ -1.9
XRN1-202ENST00000392981 COX8CQ7Z4L0 72 aa3.17□□□□□ -1.9
XRN1-202ENST00000392981 ALYREFQ86V81 257 aaKnown RBP3.17□□□□□ -1.9
XRN1-202ENST00000392981 OR5AU1Q8NGC0 362 aa3.17□□□□□ -1.9
XRN1-202ENST00000392981 OR8J2Q8NGG1 315 aa3.17□□□□□ -1.9
XRN1-202ENST00000392981 OR52E5Q8NH55 327 aa3.17□□□□□ -1.9
XRN1-202ENST00000392981 ZNF564Q8TBZ8 553 aaPredicted RBP3.17□□□□□ -1.9
XRN1-202ENST00000392981 PHLDA1Q8WV24 401 aaPredicted RBP3.17□□□□□ -1.9
XRN1-202ENST00000392981 MBOAT4Q96T53 435 aa3.17□□□□□ -1.9
XRN1-202ENST00000392981 BTBD10Q9BSF8 475 aa3.17□□□□□ -1.9
XRN1-202ENST00000392981 LRRC4Q9HBW1 653 aa3.17□□□□□ -1.9
XRN1-202ENST00000392981 SPAG4Q9NPE6 437 aa3.17□□□□□ -1.9
XRN1-202ENST00000392981 SLC2A9Q9NRM0 540 aa3.17□□□□□ -1.9
XRN1-202ENST00000392981 FLRT3Q9NZU0 649 aa3.17□□□□□ -1.9
XRN1-202ENST00000392981 ZNF282Q9UDV7 671 aaPredicted RBP3.17□□□□□ -1.9
XRN1-202ENST00000392981 ZDHHC2Q9UIJ5 367 aa3.17□□□□□ -1.9
XRN1-202ENST00000392981 ZNF225Q9UK10 706 aa3.17□□□□□ -1.9
XRN1-202ENST00000392981 NXT1Q9UKK6 140 aaKnown RBP3.17□□□□□ -1.9
XRN1-202ENST00000392981 TCF19Q9Y242 345 aa3.17□□□□□ -1.9
XRN1-202ENST00000392981 A0A1W2PQ72 361 aa3.17□□□□□ -1.9
XRN1-202ENST00000392981 F6UB75 175 aa3.17□□□□□ -1.9
XRN1-202ENST00000392981 ZNF623O75123 536 aa3.17□□□□□ -1.9
XRN1-202ENST00000392981 CNIH1O95406 144 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms