RNA–Protein interactions for RNA: ENST00000392811.6

SMARCD3-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 2,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-203ENST00000392811 PLPP5Q8NEB5 264 aa23.3■■□□□ 1.32
SMARCD3-203ENST00000392811 OR13C5Q8NGS8 318 aa23.3■■□□□ 1.32
SMARCD3-203ENST00000392811 SNX33Q8WV41 574 aa23.3■■□□□ 1.32
SMARCD3-203ENST00000392811 ACOT12Q8WYK0 555 aa23.3■■□□□ 1.32
SMARCD3-203ENST00000392811 TP53INP1Q96A56 240 aa23.3■■□□□ 1.32
SMARCD3-203ENST00000392811 DEPDC7Q96QD5 511 aa23.3■■□□□ 1.32
SMARCD3-203ENST00000392811 A0A1W2PQD3 144 aa23.3■■□□□ 1.32
SMARCD3-203ENST00000392811 MYL9P24844 172 aa23.3■■□□□ 1.32
SMARCD3-203ENST00000392811 DHPSP49366 369 aaPredicted RBP23.3■■□□□ 1.32
SMARCD3-203ENST00000392811 GBX2P52951 348 aaPredicted RBP23.3■■□□□ 1.32
SMARCD3-203ENST00000392811 DAB2P98082 770 aa23.3■■□□□ 1.32
SMARCD3-203ENST00000392811 LYSMD4Q5XG99 296 aa23.3■■□□□ 1.32
SMARCD3-203ENST00000392811 AKAP14Q86UN6 197 aa23.3■■□□□ 1.32
SMARCD3-203ENST00000392811 JAZF1Q86VZ6 243 aa23.3■■□□□ 1.32
SMARCD3-203ENST00000392811 MS4A15Q8N5U1 240 aa23.3■■□□□ 1.32
SMARCD3-203ENST00000392811 LSM14AQ8ND56 463 aaKnown RBP23.3■■□□□ 1.32
SMARCD3-203ENST00000392811 TAAR8Q969N4 342 aa23.3■■□□□ 1.32
SMARCD3-203ENST00000392811 TBL1XR1Q9BZK7 514 aa23.3■■□□□ 1.32
SMARCD3-203ENST00000392811 NCDNQ9UBB6 729 aa23.3■■□□□ 1.32
SMARCD3-203ENST00000392811 SLC6A5Q9Y345 797 aa23.3■■□□□ 1.32
SMARCD3-203ENST00000392811 OR6C76A6NM76 312 aa23.29■■□□□ 1.32
SMARCD3-203ENST00000392811 AGRPO00253 132 aa23.29■■□□□ 1.32
SMARCD3-203ENST00000392811 KHNYNO15037 678 aaKnown RBP23.29■■□□□ 1.32
SMARCD3-203ENST00000392811 GLCEO94923 617 aa23.29■■□□□ 1.32
SMARCD3-203ENST00000392811 F13BP05160 661 aa23.29■■□□□ 1.32
SMARCD3-203ENST00000392811 APEHP13798 732 aaKnown RBP23.29■■□□□ 1.32
SMARCD3-203ENST00000392811 ITPKBP27987 946 aa23.29■■□□□ 1.32
SMARCD3-203ENST00000392811 CDK5R1Q15078 307 aa23.29■■□□□ 1.32
SMARCD3-203ENST00000392811 LINC01590Q5TEZ4 76 aa23.29■■□□□ 1.32
SMARCD3-203ENST00000392811 ZBTB8BQ8NAP8 495 aaPredicted RBP23.29■■□□□ 1.32
SMARCD3-203ENST00000392811 RPRD1BQ9NQG5 326 aaKnown RBP23.29■■□□□ 1.32
SMARCD3-203ENST00000392811 GNG8Q9UK08 70 aa23.29■■□□□ 1.32
SMARCD3-203ENST00000392811 SRPK3Q9UPE1 567 aa23.29■■□□□ 1.32
SMARCD3-203ENST00000392811 FAM171A2A8MVW0 826 aa23.28■■□□□ 1.32
SMARCD3-203ENST00000392811 SLC19A2O60779 497 aa23.28■■□□□ 1.32
SMARCD3-203ENST00000392811 FOSL2P15408 326 aa23.28■■□□□ 1.32
SMARCD3-203ENST00000392811 EPHA8P29322 1005 aaPredicted RBP23.28■■□□□ 1.32
SMARCD3-203ENST00000392811 CASP3P42574 277 aa23.28■■□□□ 1.32
SMARCD3-203ENST00000392811 PNLIPRP2P54317 469 aa23.28■■□□□ 1.32
SMARCD3-203ENST00000392811 OR10A3P58181 314 aa23.28■■□□□ 1.32
SMARCD3-203ENST00000392811 RPL18Q07020 188 aaKnown RBP23.28■■□□□ 1.32
SMARCD3-203ENST00000392811 RHBDD2Q6NTF9 364 aa23.28■■□□□ 1.32
SMARCD3-203ENST00000392811 TPRA1Q86W33 373 aa23.28■■□□□ 1.32
SMARCD3-203ENST00000392811 SMIM19Q96E16 107 aa23.28■■□□□ 1.32
SMARCD3-203ENST00000392811 ALG12Q9BV10 488 aa23.28■■□□□ 1.32
SMARCD3-203ENST00000392811 SLC7A5P2Q9GIP4 190 aa23.28■■□□□ 1.32
SMARCD3-203ENST00000392811 ADAM30Q9UKF2 790 aa23.28■■□□□ 1.32
SMARCD3-203ENST00000392811 IGHV3-20A0A0C4DH32 117 aa23.28■■□□□ 1.32
SMARCD3-203ENST00000392811 CPED1A4D0V7 1026 aa23.28■■□□□ 1.32
SMARCD3-203ENST00000392811 TOX3O15405 576 aaPredicted RBP23.28■■□□□ 1.32
SMARCD3-203ENST00000392811 EIF4E2O60573 245 aaKnown RBP23.28■■□□□ 1.32
SMARCD3-203ENST00000392811 SDHAP31040 664 aa23.28■■□□□ 1.32
SMARCD3-203ENST00000392811 RPS5P46782 204 aaKnown RBP23.28■■□□□ 1.32
SMARCD3-203ENST00000392811 GDI2P50395 445 aaKnown RBP23.28■■□□□ 1.32
SMARCD3-203ENST00000392811 OR2B6P58173 313 aa23.28■■□□□ 1.32
SMARCD3-203ENST00000392811 SIRPAP78324 504 aa23.28■■□□□ 1.32
SMARCD3-203ENST00000392811 IL18Q14116 193 aa23.28■■□□□ 1.32
SMARCD3-203ENST00000392811 GUSBP11Q6P575 273 aa23.28■■□□□ 1.32
SMARCD3-203ENST00000392811 POMZP3Q6PJE2 187 aa23.28■■□□□ 1.32
SMARCD3-203ENST00000392811 Q7L0L9 218 aa23.28■■□□□ 1.32
SMARCD3-203ENST00000392811 KANSL1Q7Z3B3 1105 aa23.28■■□□□ 1.32
SMARCD3-203ENST00000392811 NANOGNBQ7Z5D8 188 aa23.28■■□□□ 1.32
SMARCD3-203ENST00000392811 STT3BQ8TCJ2 826 aa23.28■■□□□ 1.32
SMARCD3-203ENST00000392811 CHAC2Q8WUX2 184 aa23.28■■□□□ 1.32
SMARCD3-203ENST00000392811 SLC22A4Q9H015 551 aa23.28■■□□□ 1.32
SMARCD3-203ENST00000392811 C11orf54Q9H0W9 315 aaPredicted RBP23.28■■□□□ 1.32
SMARCD3-203ENST00000392811 ACOXLQ9NUZ1 547 aa23.28■■□□□ 1.32
SMARCD3-203ENST00000392811 COLQQ9Y215 455 aaPredicted RBP23.28■■□□□ 1.32
SMARCD3-203ENST00000392811 MYO15AQ9UKN7 3530 aa23.27■■□□□ 1.32
SMARCD3-203ENST00000392811 ELK1P19419 428 aa23.27■■□□□ 1.32
SMARCD3-203ENST00000392811 PTBP1P26599 531 aaKnown RBP eCLIP23.27■■□□□ 1.32
SMARCD3-203ENST00000392811 THBS2P35442 1172 aa23.27■■□□□ 1.32
SMARCD3-203ENST00000392811 SLC25A1P53007 311 aa23.27■■□□□ 1.32
SMARCD3-203ENST00000392811 CBX3Q13185 183 aa23.27■■□□□ 1.32
SMARCD3-203ENST00000392811 NUP54Q7Z3B4 507 aa23.27■■□□□ 1.32
SMARCD3-203ENST00000392811 Q8N402 240 aa23.27■■□□□ 1.32
SMARCD3-203ENST00000392811 EXD3Q8N9H8 876 aa23.27■■□□□ 1.32
SMARCD3-203ENST00000392811 TSSK2Q96PF2 358 aa23.27■■□□□ 1.32
SMARCD3-203ENST00000392811 A0A0G2JK05 382 aa23.26■■□□□ 1.31
SMARCD3-203ENST00000392811 FAM25AB3EWG3 89 aa23.26■■□□□ 1.31
SMARCD3-203ENST00000392811 FAM25CB3EWG5 89 aa23.26■■□□□ 1.31
SMARCD3-203ENST00000392811 FAM25GB3EWG6 89 aa23.26■■□□□ 1.31
SMARCD3-203ENST00000392811 WISP1O95388 367 aa23.26■■□□□ 1.31
SMARCD3-203ENST00000392811 NUDT14O95848 222 aa23.26■■□□□ 1.31
SMARCD3-203ENST00000392811 TXNDC12O95881 172 aa23.26■■□□□ 1.31
SMARCD3-203ENST00000392811 SLC2A2P11168 524 aaPredicted RBP23.26■■□□□ 1.31
SMARCD3-203ENST00000392811 CXCR1P25024 350 aa23.26■■□□□ 1.31
SMARCD3-203ENST00000392811 SFXN4Q6P4A7 337 aa23.26■■□□□ 1.31
SMARCD3-203ENST00000392811 TEX19Q8NA77 164 aa23.26■■□□□ 1.31
SMARCD3-203ENST00000392811 SLC38A9Q8NBW4 561 aa23.26■■□□□ 1.31
SMARCD3-203ENST00000392811 THAP4Q8WY91 577 aa23.26■■□□□ 1.31
SMARCD3-203ENST00000392811 TGIF2Q9GZN2 237 aa23.26■■□□□ 1.31
SMARCD3-203ENST00000392811 B3GAT2Q9NPZ5 323 aa23.26■■□□□ 1.31
SMARCD3-203ENST00000392811 ZNF346Q9UL40 294 aaKnown RBP23.26■■□□□ 1.31
SMARCD3-203ENST00000392811 CACNA1EQ15878 2313 aa23.26■■□□□ 1.31
SMARCD3-203ENST00000392811 PLA2G10O15496 165 aa23.26■■□□□ 1.31
SMARCD3-203ENST00000392811 SCO2O43819 266 aa23.26■■□□□ 1.31
SMARCD3-203ENST00000392811 CPNE3O75131 537 aaKnown RBP23.26■■□□□ 1.31
SMARCD3-203ENST00000392811 AGAP6Q5VW22 663 aa23.26■■□□□ 1.31
SMARCD3-203ENST00000392811 IL20RBQ6UXL0 311 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms