RNA–Protein interactions for RNA: ENST00000390993.1

SNORD28B-201, Transcript of small nucleolar RNA, C/D box 28B, humanhuman

BASIC

Gene SNORD28B, Length 75 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28B-201ENST00000390993 TMEM246Q9BRR3 403 aa0.61□□□□□ -2.31
SNORD28B-201ENST00000390993 FICDQ9BVA6 458 aa0.61□□□□□ -2.31
SNORD28B-201ENST00000390993 XPO4Q9C0E2 1151 aaKnown RBP0.61□□□□□ -2.31
SNORD28B-201ENST00000390993 ACTR6Q9GZN1 396 aa0.61□□□□□ -2.31
SNORD28B-201ENST00000390993 RAB17Q9H0T7 212 aa0.61□□□□□ -2.31
SNORD28B-201ENST00000390993 C20orf85Q9H1P6 137 aa0.61□□□□□ -2.31
SNORD28B-201ENST00000390993 GBA3Q9H227 469 aa0.61□□□□□ -2.31
SNORD28B-201ENST00000390993 SRMSQ9H3Y6 488 aa0.61□□□□□ -2.31
SNORD28B-201ENST00000390993 ROPN1Q9HAT0 212 aaPredicted RBP0.61□□□□□ -2.31
SNORD28B-201ENST00000390993 VAT1LQ9HCJ6 419 aa0.61□□□□□ -2.31
SNORD28B-201ENST00000390993 MRPL47Q9HD33 250 aaKnown RBP0.61□□□□□ -2.31
SNORD28B-201ENST00000390993 CTPS2Q9NRF8 586 aa0.61□□□□□ -2.31
SNORD28B-201ENST00000390993 ZNF355PQ9NSJ1 428 aa0.61□□□□□ -2.31
SNORD28B-201ENST00000390993 GPATCH2LQ9NWQ4 482 aa0.61□□□□□ -2.31
SNORD28B-201ENST00000390993 CNOT2Q9NZN8 540 aaKnown RBP0.61□□□□□ -2.31
SNORD28B-201ENST00000390993 ZNF629Q9UEG4 869 aaPredicted RBP0.61□□□□□ -2.31
SNORD28B-201ENST00000390993 IL19Q9UHD0 177 aa0.61□□□□□ -2.31
SNORD28B-201ENST00000390993 CD84Q9UIB8 345 aa0.61□□□□□ -2.31
SNORD28B-201ENST00000390993 TMCO1Q9UM00 188 aa0.61□□□□□ -2.31
SNORD28B-201ENST00000390993 FOXJ3Q9UPW0 622 aa0.61□□□□□ -2.31
SNORD28B-201ENST00000390993 RPL36Q9Y3U8 105 aaKnown RBP0.61□□□□□ -2.31
SNORD28B-201ENST00000390993 N6AMT1Q9Y5N5 214 aa0.61□□□□□ -2.31
SNORD28B-201ENST00000390993 WIF1Q9Y5W5 379 aa0.61□□□□□ -2.31
SNORD28B-201ENST00000390993 NUP214P35658 2090 aaPredicted RBP0.61□□□□□ -2.31
SNORD28B-201ENST00000390993 PIKFYVEQ9Y2I7 2098 aa0.61□□□□□ -2.31
SNORD28B-201ENST00000390993 FRMPD4Q14CM0 1322 aa0.61□□□□□ -2.31
SNORD28B-201ENST00000390993 IGSF9BQ9UPX0 1349 aa0.61□□□□□ -2.31
SNORD28B-201ENST00000390993 CUX2O14529 1486 aa0.61□□□□□ -2.31
SNORD28B-201ENST00000390993 GPR179Q6PRD1 2367 aa0.6□□□□□ -2.31
SNORD28B-201ENST00000390993 COL5A1P20908 1838 aaPredicted RBP0.6□□□□□ -2.31
SNORD28B-201ENST00000390993 A0A1B0GUS0 222 aa0.6□□□□□ -2.31
SNORD28B-201ENST00000390993 TMEM223A0PJW6 202 aa0.6□□□□□ -2.31
SNORD28B-201ENST00000390993 ZNF878C9JN71 531 aa0.6□□□□□ -2.31
SNORD28B-201ENST00000390993 NPIPA7E9PJI5 369 aa0.6□□□□□ -2.31
SNORD28B-201ENST00000390993 LOC110117498-PIK3R3F6TDL0 507 aa0.6□□□□□ -2.31
SNORD28B-201ENST00000390993 DCTN6O00399 190 aa0.6□□□□□ -2.31
SNORD28B-201ENST00000390993 RAD51BO15315 384 aa0.6□□□□□ -2.31
SNORD28B-201ENST00000390993 ADAM12O43184 909 aa0.6□□□□□ -2.31
SNORD28B-201ENST00000390993 VEGFDO43915 354 aa0.6□□□□□ -2.31
SNORD28B-201ENST00000390993 CXCL13O43927 109 aa0.6□□□□□ -2.31
SNORD28B-201ENST00000390993 KINO60870 393 aaKnown RBP0.6□□□□□ -2.31
SNORD28B-201ENST00000390993 CDRT1O95170 752 aa0.6□□□□□ -2.31
SNORD28B-201ENST00000390993 F10P00742 488 aa0.6□□□□□ -2.31
SNORD28B-201ENST00000390993 BGLAPP02818 100 aa0.6□□□□□ -2.31
SNORD28B-201ENST00000390993 ALDOBP05062 364 aa0.6□□□□□ -2.31
SNORD28B-201ENST00000390993 GKN3PP0CG01 181 aa0.6□□□□□ -2.31
SNORD28B-201ENST00000390993 NPIPA8P0DM63 369 aa0.6□□□□□ -2.31
SNORD28B-201ENST00000390993 C1GALT1C1LP0DN25 315 aa0.6□□□□□ -2.31
SNORD28B-201ENST00000390993 CCDC130P13994 396 aa0.6□□□□□ -2.31
SNORD28B-201ENST00000390993 ARF4P18085 180 aaPredicted RBP0.6□□□□□ -2.31
SNORD28B-201ENST00000390993 COX5AP20674 150 aa0.6□□□□□ -2.31
SNORD28B-201ENST00000390993 TBXA2RP21731 343 aa0.6□□□□□ -2.31
SNORD28B-201ENST00000390993 RDXP35241 583 aaKnown RBP0.6□□□□□ -2.31
SNORD28B-201ENST00000390993 TDO2P48775 406 aa0.6□□□□□ -2.31
SNORD28B-201ENST00000390993 ERVK-25P63136 954 aa0.6□□□□□ -2.31
SNORD28B-201ENST00000390993 ARG2P78540 354 aa0.6□□□□□ -2.31
SNORD28B-201ENST00000390993 TNFRSF17Q02223 184 aa0.6□□□□□ -2.31
SNORD28B-201ENST00000390993 HSF2Q03933 536 aa0.6□□□□□ -2.31
SNORD28B-201ENST00000390993 ACTN3Q08043 901 aaPredicted RBP0.6□□□□□ -2.31
SNORD28B-201ENST00000390993 ZNF763Q0D2J5 394 aa0.6□□□□□ -2.31
SNORD28B-201ENST00000390993 TCP10Q12799 353 aa0.6□□□□□ -2.31
SNORD28B-201ENST00000390993 GAMTQ14353 236 aa0.6□□□□□ -2.31
SNORD28B-201ENST00000390993 GINS1Q14691 196 aa0.6□□□□□ -2.31
SNORD28B-201ENST00000390993 MESDQ14696 234 aa0.6□□□□□ -2.31
SNORD28B-201ENST00000390993 TPD52L1Q16890 204 aaPredicted RBP0.6□□□□□ -2.31
SNORD28B-201ENST00000390993 TTLL9Q3SXZ7 439 aa0.6□□□□□ -2.31
SNORD28B-201ENST00000390993 SPIN3Q5JUX0 258 aa0.6□□□□□ -2.31
SNORD28B-201ENST00000390993 LDLRAP1Q5SW96 308 aa0.6□□□□□ -2.31
SNORD28B-201ENST00000390993 ARMC3Q5W041 872 aa0.6□□□□□ -2.31
SNORD28B-201ENST00000390993 AP1ARQ63HQ0 302 aa0.6□□□□□ -2.31
SNORD28B-201ENST00000390993 NIPAL3Q6P499 406 aa0.6□□□□□ -2.31
SNORD28B-201ENST00000390993 LYPD2Q6UXB3 125 aa0.6□□□□□ -2.31
SNORD28B-201ENST00000390993 ABHD13Q7L211 337 aa0.6□□□□□ -2.31
SNORD28B-201ENST00000390993 NLRP9Q7RTR0 991 aa0.6□□□□□ -2.31
SNORD28B-201ENST00000390993 DPY19L4Q7Z388 723 aa0.6□□□□□ -2.31
SNORD28B-201ENST00000390993 BIVMQ86UB2 503 aa0.6□□□□□ -2.31
SNORD28B-201ENST00000390993 PLA2G4DQ86XP0 818 aa0.6□□□□□ -2.31
SNORD28B-201ENST00000390993 PRSS58Q8IYP2 241 aa0.6□□□□□ -2.31
SNORD28B-201ENST00000390993 LINC01561Q8N1V8 128 aa0.6□□□□□ -2.31
SNORD28B-201ENST00000390993 MREGQ8N565 214 aa0.6□□□□□ -2.31
SNORD28B-201ENST00000390993 CLDN19Q8N6F1 224 aa0.6□□□□□ -2.31
SNORD28B-201ENST00000390993 BCORP1Q8N888 145 aa0.6□□□□□ -2.31
SNORD28B-201ENST00000390993 FNDC5Q8NAU1 212 aa0.6□□□□□ -2.31
SNORD28B-201ENST00000390993 TMEM104Q8NE00 496 aa0.6□□□□□ -2.31
SNORD28B-201ENST00000390993 CNNM3Q8NE01 707 aa0.6□□□□□ -2.31
SNORD28B-201ENST00000390993 STXBP6Q8NFX7 210 aa0.6□□□□□ -2.31
SNORD28B-201ENST00000390993 OR4K14Q8NGD5 310 aa0.6□□□□□ -2.31
SNORD28B-201ENST00000390993 MAIP1Q8WWC4 291 aa0.6□□□□□ -2.31
SNORD28B-201ENST00000390993 RTN4IP1Q8WWV3 396 aaPredicted RBP0.6□□□□□ -2.31
SNORD28B-201ENST00000390993 GEMIN6Q8WXD5 167 aaKnown RBP0.6□□□□□ -2.31
SNORD28B-201ENST00000390993 ACOT11Q8WXI4 607 aaPredicted RBP0.6□□□□□ -2.31
SNORD28B-201ENST00000390993 FGF11Q92914 225 aa0.6□□□□□ -2.31
SNORD28B-201ENST00000390993 TMEM186Q96B77 213 aa0.6□□□□□ -2.31
SNORD28B-201ENST00000390993 LRRC58Q96CX6 371 aa0.6□□□□□ -2.31
SNORD28B-201ENST00000390993 PELI1Q96FA3 418 aa0.6□□□□□ -2.31
SNORD28B-201ENST00000390993 SH3YL1Q96HL8 342 aaPredicted RBP0.6□□□□□ -2.31
SNORD28B-201ENST00000390993 CABS1Q96KC9 395 aa0.6□□□□□ -2.31
SNORD28B-201ENST00000390993 C12orf66Q96MD2 445 aa0.6□□□□□ -2.31
SNORD28B-201ENST00000390993 FOXC2Q99958 501 aa0.6□□□□□ -2.31
SNORD28B-201ENST00000390993 TUBGCP2Q9BSJ2 902 aa0.6□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms