RNA–Protein interactions for RNA: ENST00000390427.3

TRAV5-201, Transcript of T cell receptor alpha variable 5, humanhuman

APPRIS P1 BASIC

Gene TRAV5, Length 352 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5-201ENST00000390427 RAXQ9Y2V3 346 aa6.5□□□□□ -1.37
TRAV5-201ENST00000390427 ATG4BQ9Y4P1 393 aa6.5□□□□□ -1.37
TRAV5-201ENST00000390427 PCDHGA9Q9Y5G4 932 aaKnown RBP6.5□□□□□ -1.37
TRAV5-201ENST00000390427 KCNE3Q9Y6H6 103 aa6.5□□□□□ -1.37
TRAV5-201ENST00000390427 SESN1Q9Y6P5 492 aa6.5□□□□□ -1.37
TRAV5-201ENST00000390427 WDFY3Q8IZQ1 3526 aa6.5□□□□□ -1.37
TRAV5-201ENST00000390427 CCDC88CQ9P219 2028 aa6.5□□□□□ -1.37
TRAV5-201ENST00000390427 TNRC6BQ9UPQ9 1833 aaKnown RBP6.5□□□□□ -1.37
TRAV5-201ENST00000390427 ATG2BQ96BY7 2078 aa6.49□□□□□ -1.37
TRAV5-201ENST00000390427 ASCC3Q8N3C0 2202 aaKnown RBP6.49□□□□□ -1.37
TRAV5-201ENST00000390427 ABCA7Q8IZY2 2146 aa6.49□□□□□ -1.37
TRAV5-201ENST00000390427 TCRBV21S2A2A0A5A6 115 aa6.49□□□□□ -1.37
TRAV5-201ENST00000390427 CDHR4A6H8M9 788 aa6.49□□□□□ -1.37
TRAV5-201ENST00000390427 MFSD2BA6NFX1 497 aa6.49□□□□□ -1.37
TRAV5-201ENST00000390427 HMSDA8MTL9 139 aa6.49□□□□□ -1.37
TRAV5-201ENST00000390427 ZNF879B4DU55 563 aa6.49□□□□□ -1.37
TRAV5-201ENST00000390427 G3V3Q6 166 aa6.49□□□□□ -1.37
TRAV5-201ENST00000390427 TRIM77I1YAP6 450 aa6.49□□□□□ -1.37
TRAV5-201ENST00000390427 CDC42EP2O14613 210 aa6.49□□□□□ -1.37
TRAV5-201ENST00000390427 SERPINI2O75830 405 aa6.49□□□□□ -1.37
TRAV5-201ENST00000390427 KLF8O95600 359 aaPredicted RBP6.49□□□□□ -1.37
TRAV5-201ENST00000390427 ATP1B1P05026 303 aa6.49□□□□□ -1.37
TRAV5-201ENST00000390427 APODP05090 189 aa6.49□□□□□ -1.37
TRAV5-201ENST00000390427 HOXD4P09016 255 aaPredicted RBP6.49□□□□□ -1.37
TRAV5-201ENST00000390427 CD3GP09693 182 aa6.49□□□□□ -1.37
TRAV5-201ENST00000390427 RAB40ALP0C0E4 278 aa6.49□□□□□ -1.37
TRAV5-201ENST00000390427 CALCBP10092 127 aa6.49□□□□□ -1.37
TRAV5-201ENST00000390427 ZNF250P15622 560 aa6.49□□□□□ -1.37
TRAV5-201ENST00000390427 ZNF3P17036 446 aa6.49□□□□□ -1.37
TRAV5-201ENST00000390427 ATF1P18846 271 aa6.49□□□□□ -1.37
TRAV5-201ENST00000390427 MAPK3P27361 379 aaPredicted RBP6.49□□□□□ -1.37
TRAV5-201ENST00000390427 NDUFS1P28331 727 aa6.49□□□□□ -1.37
TRAV5-201ENST00000390427 MAT2AP31153 395 aaKnown RBP6.49□□□□□ -1.37
TRAV5-201ENST00000390427 GDNFP39905 211 aa6.49□□□□□ -1.37
TRAV5-201ENST00000390427 BCL6P41182 706 aa6.49□□□□□ -1.37
TRAV5-201ENST00000390427 RBM34P42696 430 aaKnown RBP6.49□□□□□ -1.37
TRAV5-201ENST00000390427 SRP9P49458 86 aaKnown RBP6.49□□□□□ -1.37
TRAV5-201ENST00000390427 ZNF136P52737 540 aa6.49□□□□□ -1.37
TRAV5-201ENST00000390427 PDX1P52945 283 aa6.49□□□□□ -1.37
TRAV5-201ENST00000390427 BLVRAP53004 296 aa6.49□□□□□ -1.37
TRAV5-201ENST00000390427 OR10A3P58181 314 aa6.49□□□□□ -1.37
TRAV5-201ENST00000390427 ZP1P60852 638 aa6.49□□□□□ -1.37
TRAV5-201ENST00000390427 DGCR2P98153 550 aa6.49□□□□□ -1.37
TRAV5-201ENST00000390427 E2F1Q01094 437 aa6.49□□□□□ -1.37
TRAV5-201ENST00000390427 MADCAM1Q13477 382 aa6.49□□□□□ -1.37
TRAV5-201ENST00000390427 FGFBP1Q14512 234 aa6.49□□□□□ -1.37
TRAV5-201ENST00000390427 ELAVL3Q14576 367 aaKnown RBP6.49□□□□□ -1.37
TRAV5-201ENST00000390427 OPCMLQ14982 345 aa6.49□□□□□ -1.37
TRAV5-201ENST00000390427 CDK5R1Q15078 307 aa6.49□□□□□ -1.37
TRAV5-201ENST00000390427 ISXQ2M1V0 245 aa6.49□□□□□ -1.37
TRAV5-201ENST00000390427 HNRNPA1L2Q32P51 320 aaKnown RBP6.49□□□□□ -1.37
TRAV5-201ENST00000390427 SLC25A35Q3KQZ1 300 aa6.49□□□□□ -1.37
TRAV5-201ENST00000390427 ARHGAP11AQ6P4F7 1023 aa6.49□□□□□ -1.37
TRAV5-201ENST00000390427 FAM198BQ6UWH4 519 aa6.49□□□□□ -1.37
TRAV5-201ENST00000390427 C3P1Q6ZMU1 363 aa6.49□□□□□ -1.37
TRAV5-201ENST00000390427 ZNF836Q6ZNA1 936 aa6.49□□□□□ -1.37
TRAV5-201ENST00000390427 MEX3DQ86XN8 651 aaKnown RBP6.49□□□□□ -1.37
TRAV5-201ENST00000390427 NAXDQ8IW45 347 aa6.49□□□□□ -1.37
TRAV5-201ENST00000390427 ZNF619Q8N2I2 560 aa6.49□□□□□ -1.37
TRAV5-201ENST00000390427 OR2L13Q8N349 312 aa6.49□□□□□ -1.37
TRAV5-201ENST00000390427 C2orf73Q8N5S3 287 aaPredicted RBP6.49□□□□□ -1.37
TRAV5-201ENST00000390427 LINC01555Q8NAE3 123 aa6.49□□□□□ -1.37
TRAV5-201ENST00000390427 OR2A1Q8NGT9 310 aa6.49□□□□□ -1.37
TRAV5-201ENST00000390427 OR2T35Q8NGX2 323 aa6.49□□□□□ -1.37
TRAV5-201ENST00000390427 OR51Q1Q8NH59 317 aa6.49□□□□□ -1.37
TRAV5-201ENST00000390427 NT5CQ8TCD5 201 aa6.49□□□□□ -1.37
TRAV5-201ENST00000390427 TMEM255BQ8WV15 326 aa6.49□□□□□ -1.37
TRAV5-201ENST00000390427 HMGB4Q8WW32 186 aa6.49□□□□□ -1.37
TRAV5-201ENST00000390427 TMEM239Q8WW34 195 aa6.49□□□□□ -1.37
TRAV5-201ENST00000390427 RAB40AQ8WXH6 277 aa6.49□□□□□ -1.37
TRAV5-201ENST00000390427 SMPDL3BQ92485 455 aa6.49□□□□□ -1.37
TRAV5-201ENST00000390427 NSMAFQ92636 917 aa6.49□□□□□ -1.37
TRAV5-201ENST00000390427 KAT2AQ92830 837 aa6.49□□□□□ -1.37
TRAV5-201ENST00000390427 GHSRQ92847 366 aa6.49□□□□□ -1.37
TRAV5-201ENST00000390427 SMIM19Q96E16 107 aa6.49□□□□□ -1.37
TRAV5-201ENST00000390427 RBM18Q96H35 190 aaKnown RBP6.49□□□□□ -1.37
TRAV5-201ENST00000390427 C12orf66Q96MD2 445 aa6.49□□□□□ -1.37
TRAV5-201ENST00000390427 STACQ99469 402 aa6.49□□□□□ -1.37
TRAV5-201ENST00000390427 ZNF559Q9BR84 538 aa6.49□□□□□ -1.37
TRAV5-201ENST00000390427 YIPF4Q9BSR8 244 aa6.49□□□□□ -1.37
TRAV5-201ENST00000390427 REG4Q9BYZ8 158 aa6.49□□□□□ -1.37
TRAV5-201ENST00000390427 ZNF350Q9GZX5 532 aa6.49□□□□□ -1.37
TRAV5-201ENST00000390427 SPRTNQ9H040 489 aaPredicted RBP6.49□□□□□ -1.37
TRAV5-201ENST00000390427 C20orf85Q9H1P6 137 aa6.49□□□□□ -1.37
TRAV5-201ENST00000390427 LINC00597Q9H2U6 94 aa6.49□□□□□ -1.37
TRAV5-201ENST00000390427 WDR26Q9H7D7 661 aa6.49□□□□□ -1.37
TRAV5-201ENST00000390427 HRASLSQ9HDD0 168 aa6.49□□□□□ -1.37
TRAV5-201ENST00000390427 NRIP3Q9NQ35 241 aa6.49□□□□□ -1.37
TRAV5-201ENST00000390427 CTPS2Q9NRF8 586 aa6.49□□□□□ -1.37
TRAV5-201ENST00000390427 ZNF224Q9NZL3 707 aa6.49□□□□□ -1.37
TRAV5-201ENST00000390427 SLC23A2Q9UGH3 650 aa6.49□□□□□ -1.37
TRAV5-201ENST00000390427 CYB5R1Q9UHQ9 305 aa6.49□□□□□ -1.37
TRAV5-201ENST00000390427 ING1Q9UK53 422 aaPredicted RBP6.49□□□□□ -1.37
TRAV5-201ENST00000390427 SLC7A7Q9UM01 511 aa6.49□□□□□ -1.37
TRAV5-201ENST00000390427 ICAM5Q9UMF0 924 aa6.49□□□□□ -1.37
TRAV5-201ENST00000390427 SIGLEC7Q9Y286 467 aa6.49□□□□□ -1.37
TRAV5-201ENST00000390427 WDR45Q9Y484 360 aa6.49□□□□□ -1.37
TRAV5-201ENST00000390427 ETV7Q9Y603 341 aa6.49□□□□□ -1.37
TRAV5-201ENST00000390427 DMXL2Q8TDJ6 3036 aa6.49□□□□□ -1.37
TRAV5-201ENST00000390427 PCNX2A6NKB5 2137 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms