RNA–Protein interactions for RNA: ENST00000383974.1

RNU6-1040P-201, Transcript of RNA, U6 small nuclear 1040, pseudogene, humanhuman

BASIC

Gene RNU6-1040P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1040P-201ENST00000383974 IL15RAQ13261 267 aa0.74□□□□□ -2.29
RNU6-1040P-201ENST00000383974 TRIM16LQ309B1 348 aa0.74□□□□□ -2.29
RNU6-1040P-201ENST00000383974 PARP15Q460N3 678 aa0.74□□□□□ -2.29
RNU6-1040P-201ENST00000383974 WDR88Q6ZMY6 472 aa0.74□□□□□ -2.29
RNU6-1040P-201ENST00000383974 Q6ZN92 141 aa0.74□□□□□ -2.29
RNU6-1040P-201ENST00000383974 NTM-AS1Q6ZSK4 140 aa0.74□□□□□ -2.29
RNU6-1040P-201ENST00000383974 SLC26A11Q86WA9 606 aa0.74□□□□□ -2.29
RNU6-1040P-201ENST00000383974 TRIM69Q86WT6 500 aa0.74□□□□□ -2.29
RNU6-1040P-201ENST00000383974 GRAMD2AQ8IUY3 354 aa0.74□□□□□ -2.29
RNU6-1040P-201ENST00000383974 NECAP1Q8NC96 275 aa0.74□□□□□ -2.29
RNU6-1040P-201ENST00000383974 SNX21Q969T3 373 aa0.74□□□□□ -2.29
RNU6-1040P-201ENST00000383974 PINX1Q96BK5 328 aaKnown RBP0.74□□□□□ -2.29
RNU6-1040P-201ENST00000383974 PAGE5Q96GU1 130 aa0.74□□□□□ -2.29
RNU6-1040P-201ENST00000383974 DOK1Q99704 481 aa0.74□□□□□ -2.29
RNU6-1040P-201ENST00000383974 SLC6A7Q99884 636 aa0.74□□□□□ -2.29
RNU6-1040P-201ENST00000383974 ECSITQ9BQ95 431 aa0.74□□□□□ -2.29
RNU6-1040P-201ENST00000383974 DESI2Q9BSY9 194 aa0.74□□□□□ -2.29
RNU6-1040P-201ENST00000383974 CHAC1Q9BUX1 264 aa0.74□□□□□ -2.29
RNU6-1040P-201ENST00000383974 ALG12Q9BV10 488 aa0.74□□□□□ -2.29
RNU6-1040P-201ENST00000383974 POLR1EQ9GZS1 481 aaKnown RBP0.74□□□□□ -2.29
RNU6-1040P-201ENST00000383974 RHBGQ9H310 441 aa0.74□□□□□ -2.29
RNU6-1040P-201ENST00000383974 RNF167Q9H6Y7 350 aa0.74□□□□□ -2.29
RNU6-1040P-201ENST00000383974 C12orf10Q9HB07 376 aa0.74□□□□□ -2.29
RNU6-1040P-201ENST00000383974 CTPS2Q9NRF8 586 aa0.74□□□□□ -2.29
RNU6-1040P-201ENST00000383974 EXD2Q9NVH0 621 aa0.74□□□□□ -2.29
RNU6-1040P-201ENST00000383974 AATFQ9NY61 560 aaKnown RBP eCLIP0.74□□□□□ -2.29
RNU6-1040P-201ENST00000383974 ATP6V1HQ9UI12 483 aa0.74□□□□□ -2.29
RNU6-1040P-201ENST00000383974 FOXJ3Q9UPW0 622 aa0.74□□□□□ -2.29
RNU6-1040P-201ENST00000383974 F11RQ9Y624 299 aaKnown RBP0.74□□□□□ -2.29
RNU6-1040P-201ENST00000383974 SEC16AO15027 2179 aa0.73□□□□□ -2.29
RNU6-1040P-201ENST00000383974 TMEM223A0PJW6 202 aa0.73□□□□□ -2.29
RNU6-1040P-201ENST00000383974 HIP1O00291 1037 aa0.73□□□□□ -2.29
RNU6-1040P-201ENST00000383974 RAD51BO15315 384 aa0.73□□□□□ -2.29
RNU6-1040P-201ENST00000383974 IGHV1-8P0DP01 117 aa0.73□□□□□ -2.29
RNU6-1040P-201ENST00000383974 YWHABP31946 246 aaKnown RBP0.73□□□□□ -2.29
RNU6-1040P-201ENST00000383974 RFC4P35249 363 aa0.73□□□□□ -2.29
RNU6-1040P-201ENST00000383974 COPB2P35606 906 aa0.73□□□□□ -2.29
RNU6-1040P-201ENST00000383974 GYG1P46976 350 aa0.73□□□□□ -2.29
RNU6-1040P-201ENST00000383974 DAP3P51398 398 aaKnown RBP0.73□□□□□ -2.29
RNU6-1040P-201ENST00000383974 FGF8P55075 233 aaPredicted RBP0.73□□□□□ -2.29
RNU6-1040P-201ENST00000383974 SPP2Q13103 211 aa0.73□□□□□ -2.29
RNU6-1040P-201ENST00000383974 LINC01620Q4KN68 170 aa0.73□□□□□ -2.29
RNU6-1040P-201ENST00000383974 FAM133BQ5BKY9 247 aaKnown RBP0.73□□□□□ -2.29
RNU6-1040P-201ENST00000383974 COA6Q5JTJ3 125 aaKnown RBP0.73□□□□□ -2.29
RNU6-1040P-201ENST00000383974 TMEM225Q6GV28 225 aa0.73□□□□□ -2.29
RNU6-1040P-201ENST00000383974 LCN12Q6JVE5 192 aa0.73□□□□□ -2.29
RNU6-1040P-201ENST00000383974 KRTAP5-10Q6L8G5 202 aa0.73□□□□□ -2.29
RNU6-1040P-201ENST00000383974 CES3Q6UWW8 571 aa0.73□□□□□ -2.29
RNU6-1040P-201ENST00000383974 NLRP9Q7RTR0 991 aa0.73□□□□□ -2.29
RNU6-1040P-201ENST00000383974 BIVMQ86UB2 503 aa0.73□□□□□ -2.29
RNU6-1040P-201ENST00000383974 MINDY2Q8NBR6 621 aa0.73□□□□□ -2.29
RNU6-1040P-201ENST00000383974 OR1N2Q8NGR9 330 aa0.73□□□□□ -2.29
RNU6-1040P-201ENST00000383974 OR2G3Q8NGZ4 309 aa0.73□□□□□ -2.29
RNU6-1040P-201ENST00000383974 OR1P1Q8NH06 330 aa0.73□□□□□ -2.29
RNU6-1040P-201ENST00000383974 PHOSPHO2Q8TCD6 241 aa0.73□□□□□ -2.29
RNU6-1040P-201ENST00000383974 URGCPQ8TCY9 931 aa0.73□□□□□ -2.29
RNU6-1040P-201ENST00000383974 HPDLQ96IR7 371 aa0.73□□□□□ -2.29
RNU6-1040P-201ENST00000383974 ITCHQ96J02 903 aa0.73□□□□□ -2.29
RNU6-1040P-201ENST00000383974 TESK2Q96S53 571 aa0.73□□□□□ -2.29
RNU6-1040P-201ENST00000383974 LZTS2Q9BRK4 669 aa0.73□□□□□ -2.29
RNU6-1040P-201ENST00000383974 SLC35A5Q9BS91 424 aa0.73□□□□□ -2.29
RNU6-1040P-201ENST00000383974 ZNF717Q9BY31 904 aaPredicted RBP0.73□□□□□ -2.29
RNU6-1040P-201ENST00000383974 CD84Q9UIB8 345 aa0.73□□□□□ -2.29
RNU6-1040P-201ENST00000383974 SIGLEC9Q9Y336 463 aa0.73□□□□□ -2.29
RNU6-1040P-201ENST00000383974 ALG6Q9Y672 507 aa0.73□□□□□ -2.29
RNU6-1040P-201ENST00000383974 FRMPD4Q14CM0 1322 aa0.72□□□□□ -2.29
RNU6-1040P-201ENST00000383974 RPGRIP1LQ68CZ1 1315 aa0.72□□□□□ -2.29
RNU6-1040P-201ENST00000383974 IGHV5-10-1A0A0J9YXX1 117 aa0.72□□□□□ -2.29
RNU6-1040P-201ENST00000383974 A0A1W2PNN7 141 aa0.72□□□□□ -2.29
RNU6-1040P-201ENST00000383974 ARHGAP42A6NI28 874 aa0.72□□□□□ -2.29
RNU6-1040P-201ENST00000383974 C12orf71A8MTZ7 269 aa0.72□□□□□ -2.29
RNU6-1040P-201ENST00000383974 HMGB1P1B2RPK0 211 aaPredicted RBP0.72□□□□□ -2.29
RNU6-1040P-201ENST00000383974 C12orf77C9JDV5 145 aa0.72□□□□□ -2.29
RNU6-1040P-201ENST00000383974 G3V4G9 280 aa0.72□□□□□ -2.29
RNU6-1040P-201ENST00000383974 J3QRE1 110 aa0.72□□□□□ -2.29
RNU6-1040P-201ENST00000383974 DNASE2O00115 360 aaPredicted RBP0.72□□□□□ -2.29
RNU6-1040P-201ENST00000383974 LGALS9O00182 355 aa0.72□□□□□ -2.29
RNU6-1040P-201ENST00000383974 CHST1O43916 411 aa0.72□□□□□ -2.29
RNU6-1040P-201ENST00000383974 TRIM16O95361 564 aa0.72□□□□□ -2.29
RNU6-1040P-201ENST00000383974 LGALS2P05162 132 aa0.72□□□□□ -2.29
RNU6-1040P-201ENST00000383974 KLK3P07288 261 aaPredicted RBP0.72□□□□□ -2.29
RNU6-1040P-201ENST00000383974 UBTFL1P0CB47 393 aaPredicted RBP0.72□□□□□ -2.29
RNU6-1040P-201ENST00000383974 IGHV3-43DP0DP04 118 aa0.72□□□□□ -2.29
RNU6-1040P-201ENST00000383974 PRPS2P11908 318 aa0.72□□□□□ -2.29
RNU6-1040P-201ENST00000383974 NPR2P20594 1047 aa0.72□□□□□ -2.29
RNU6-1040P-201ENST00000383974 CMA1P23946 247 aa0.72□□□□□ -2.29
RNU6-1040P-201ENST00000383974 HSD17B7P56937 341 aa0.72□□□□□ -2.29
RNU6-1040P-201ENST00000383974 RPS14P62263 151 aaKnown RBP0.72□□□□□ -2.29
RNU6-1040P-201ENST00000383974 FLI1Q01543 452 aaPredicted RBP0.72□□□□□ -2.29
RNU6-1040P-201ENST00000383974 ZNF616Q08AN1 781 aa0.72□□□□□ -2.29
RNU6-1040P-201ENST00000383974 LASP1Q14847 261 aaKnown RBP0.72□□□□□ -2.29
RNU6-1040P-201ENST00000383974 ARMC3Q5W041 872 aa0.72□□□□□ -2.29
RNU6-1040P-201ENST00000383974 GET4Q7L5D6 327 aaPredicted RBP0.72□□□□□ -2.29
RNU6-1040P-201ENST00000383974 ATP6V0D2Q8N8Y2 350 aa0.72□□□□□ -2.29
RNU6-1040P-201ENST00000383974 OR4K14Q8NGD5 310 aa0.72□□□□□ -2.29
RNU6-1040P-201ENST00000383974 CMTM7Q96FZ5 175 aa0.72□□□□□ -2.29
RNU6-1040P-201ENST00000383974 AURKBQ96GD4 344 aaPredicted RBP0.72□□□□□ -2.29
RNU6-1040P-201ENST00000383974 AKR1E2Q96JD6 320 aa0.72□□□□□ -2.29
RNU6-1040P-201ENST00000383974 AGPAT5Q9NUQ2 364 aa0.72□□□□□ -2.29
RNU6-1040P-201ENST00000383974 STRAPQ9Y3F4 350 aaKnown RBP0.72□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms