RNA–Protein interactions for RNA: ENST00000381551.8

PDGFB-202, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 5 BASIC

Gene PDGFB, Length 1,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-202ENST00000381551 SLC46A3Q7Z3Q1 461 aa13.8□□□□□ -0.2
PDGFB-202ENST00000381551 NAXEQ8NCW5 288 aa13.8□□□□□ -0.2
PDGFB-202ENST00000381551 OR4K5Q8NGD3 323 aa13.8□□□□□ -0.2
PDGFB-202ENST00000381551 RND1Q92730 232 aa13.8□□□□□ -0.2
PDGFB-202ENST00000381551 CCDC120Q96HB5 630 aa13.8□□□□□ -0.2
PDGFB-202ENST00000381551 FKRPQ9H9S5 495 aa13.8□□□□□ -0.2
PDGFB-202ENST00000381551 NTN4Q9HB63 628 aa13.8□□□□□ -0.2
PDGFB-202ENST00000381551 NANSQ9NR45 359 aa13.8□□□□□ -0.2
PDGFB-202ENST00000381551 MRPL39Q9NYK5 338 aaKnown RBP13.8□□□□□ -0.2
PDGFB-202ENST00000381551 SEC14L4Q9UDX3 406 aa13.8□□□□□ -0.2
PDGFB-202ENST00000381551 Q9UFV3 132 aa13.8□□□□□ -0.2
PDGFB-202ENST00000381551 ERRFI1Q9UJM3 462 aaPredicted RBP13.8□□□□□ -0.2
PDGFB-202ENST00000381551 ZNF229Q9UJW7 825 aa13.8□□□□□ -0.2
PDGFB-202ENST00000381551 ING1Q9UK53 422 aaPredicted RBP13.8□□□□□ -0.2
PDGFB-202ENST00000381551 SLC5A6Q9Y289 635 aa13.8□□□□□ -0.2
PDGFB-202ENST00000381551 B3GALT5Q9Y2C3 310 aa13.8□□□□□ -0.2
PDGFB-202ENST00000381551 SAMHD1Q9Y3Z3 626 aaKnown RBP13.8□□□□□ -0.2
PDGFB-202ENST00000381551 CORINQ9Y5Q5 1042 aa13.8□□□□□ -0.2
PDGFB-202ENST00000381551 U3KQV3 271 aa13.8□□□□□ -0.2
PDGFB-202ENST00000381551 HIVEP3Q5T1R4 2406 aa13.8□□□□□ -0.2
PDGFB-202ENST00000381551 ZNF716A6NP11 495 aa13.79□□□□□ -0.2
PDGFB-202ENST00000381551 MS4A18H0YCH9 400 aa13.79□□□□□ -0.2
PDGFB-202ENST00000381551 H3BNX3 289 aa13.79□□□□□ -0.2
PDGFB-202ENST00000381551 M0R082 166 aa13.79□□□□□ -0.2
PDGFB-202ENST00000381551 GNGT2O14610 69 aa13.79□□□□□ -0.2
PDGFB-202ENST00000381551 OR7A10O76100 309 aa13.79□□□□□ -0.2
PDGFB-202ENST00000381551 MAKP20794 623 aa13.79□□□□□ -0.2
PDGFB-202ENST00000381551 OMPP47874 163 aa13.79□□□□□ -0.2
PDGFB-202ENST00000381551 ADORA2A-AS1P86434 159 aa13.79□□□□□ -0.2
PDGFB-202ENST00000381551 RASGEF1BQ0VAM2 473 aa13.79□□□□□ -0.2
PDGFB-202ENST00000381551 FOXF2Q12947 444 aa13.79□□□□□ -0.2
PDGFB-202ENST00000381551 GK3PQ14409 553 aa13.79□□□□□ -0.2
PDGFB-202ENST00000381551 PDK3Q15120 406 aa13.79□□□□□ -0.2
PDGFB-202ENST00000381551 MS4A18Q3C1V0 323 aa13.79□□□□□ -0.2
PDGFB-202ENST00000381551 TMEM225Q6GV28 225 aa13.79□□□□□ -0.2
PDGFB-202ENST00000381551 ZFP1Q6P2D0 407 aa13.79□□□□□ -0.2
PDGFB-202ENST00000381551 MTFR2Q6P444 385 aa13.79□□□□□ -0.2
PDGFB-202ENST00000381551 ZER1Q7Z7L7 766 aa13.79□□□□□ -0.2
PDGFB-202ENST00000381551 MEX3DQ86XN8 651 aaKnown RBP13.79□□□□□ -0.2
PDGFB-202ENST00000381551 CDK20Q8IZL9 346 aa13.79□□□□□ -0.2
PDGFB-202ENST00000381551 SCAIQ8N9R8 606 aa13.79□□□□□ -0.2
PDGFB-202ENST00000381551 ZNF417Q8TAU3 575 aa13.79□□□□□ -0.2
PDGFB-202ENST00000381551 ABHD3Q8WU67 409 aa13.79□□□□□ -0.2
PDGFB-202ENST00000381551 INTS12Q96CB8 462 aaKnown RBP13.79□□□□□ -0.2
PDGFB-202ENST00000381551 ZFP3Q96NJ6 502 aa13.79□□□□□ -0.2
PDGFB-202ENST00000381551 ZNF587Q96SQ5 575 aaPredicted RBP13.79□□□□□ -0.2
PDGFB-202ENST00000381551 PSD2Q9BQI7 771 aa13.79□□□□□ -0.2
PDGFB-202ENST00000381551 SF3B5Q9BWJ5 86 aaKnown RBP13.79□□□□□ -0.2
PDGFB-202ENST00000381551 ASPNQ9BXN1 380 aa13.79□□□□□ -0.2
PDGFB-202ENST00000381551 GP6Q9HCN6 339 aa13.79□□□□□ -0.2
PDGFB-202ENST00000381551 CHST11Q9NPF2 352 aa13.79□□□□□ -0.2
PDGFB-202ENST00000381551 GLRX2Q9NS18 164 aa13.79□□□□□ -0.2
PDGFB-202ENST00000381551 MED12LQ86YW9 2145 aa13.79□□□□□ -0.2
PDGFB-202ENST00000381551 DOCK7Q96N67 2140 aa13.79□□□□□ -0.2
PDGFB-202ENST00000381551 ASH1LQ9NR48 2969 aaKnown RBP13.78□□□□□ -0.2
PDGFB-202ENST00000381551 LOC102725191A0A1B0GVB3 256 aa13.78□□□□□ -0.2
PDGFB-202ENST00000381551 HSPB2A8KAH6 182 aa13.78□□□□□ -0.2
PDGFB-202ENST00000381551 PLPP3O14495 311 aa13.78□□□□□ -0.2
PDGFB-202ENST00000381551 OR10H3O60404 316 aa13.78□□□□□ -0.2
PDGFB-202ENST00000381551 DEAF1O75398 565 aaPredicted RBP13.78□□□□□ -0.2
PDGFB-202ENST00000381551 VAMP5O95183 116 aa13.78□□□□□ -0.2
PDGFB-202ENST00000381551 LDLRP01130 860 aa13.78□□□□□ -0.2
PDGFB-202ENST00000381551 CRHP06850 196 aa13.78□□□□□ -0.2
PDGFB-202ENST00000381551 FASP25445 335 aa13.78□□□□□ -0.2
PDGFB-202ENST00000381551 GTF2E2P29084 291 aaKnown RBP13.78□□□□□ -0.2
PDGFB-202ENST00000381551 DNAJA1P31689 397 aaKnown RBP13.78□□□□□ -0.2
PDGFB-202ENST00000381551 SLC16A1P53985 500 aa13.78□□□□□ -0.2
PDGFB-202ENST00000381551 IST1P53990 364 aa13.78□□□□□ -0.2
PDGFB-202ENST00000381551 PER3P56645 1201 aa13.78□□□□□ -0.2
PDGFB-202ENST00000381551 PMS2P3Q13401 168 aa13.78□□□□□ -0.2
PDGFB-202ENST00000381551 SLC17A1Q14916 467 aa13.78□□□□□ -0.2
PDGFB-202ENST00000381551 GUSBP1Q15486 140 aa13.78□□□□□ -0.2
PDGFB-202ENST00000381551 ATP6AP1Q15904 470 aa13.78□□□□□ -0.2
PDGFB-202ENST00000381551 HSPB2Q16082 182 aa13.78□□□□□ -0.2
PDGFB-202ENST00000381551 MICAQ29983 383 aa13.78□□□□□ -0.2
PDGFB-202ENST00000381551 ABLIM2Q6H8Q1 611 aa13.78□□□□□ -0.2
PDGFB-202ENST00000381551 ZNF770Q6IQ21 691 aaPredicted RBP13.78□□□□□ -0.2
PDGFB-202ENST00000381551 C1orf94Q6P1W5 598 aa13.78□□□□□ -0.2
PDGFB-202ENST00000381551 TMEM179BQ7Z7N9 219 aa13.78□□□□□ -0.2
PDGFB-202ENST00000381551 KDM8Q8N371 416 aa13.78□□□□□ -0.2
PDGFB-202ENST00000381551 LINC00471Q8N535 108 aa13.78□□□□□ -0.2
PDGFB-202ENST00000381551 ADPRHL1Q8NDY3 354 aa13.78□□□□□ -0.2
PDGFB-202ENST00000381551 OR5J2Q8NH18 312 aa13.78□□□□□ -0.2
PDGFB-202ENST00000381551 PIGXQ8TBF5 258 aa13.78□□□□□ -0.2
PDGFB-202ENST00000381551 LRTOMTQ8WZ04 291 aa13.78□□□□□ -0.2
PDGFB-202ENST00000381551 GMPPAQ96IJ6 420 aaPredicted RBP13.78□□□□□ -0.2
PDGFB-202ENST00000381551 BCO1Q9HAY6 547 aa13.78□□□□□ -0.2
PDGFB-202ENST00000381551 S100A14Q9HCY8 104 aa13.78□□□□□ -0.2
PDGFB-202ENST00000381551 TAS2R5Q9NYW4 299 aa13.78□□□□□ -0.2
PDGFB-202ENST00000381551 KLHL9Q9P2J3 617 aa13.78□□□□□ -0.2
PDGFB-202ENST00000381551 KLHL13Q9P2N7 655 aa13.78□□□□□ -0.2
PDGFB-202ENST00000381551 CLEC4AQ9UMR7 237 aa13.78□□□□□ -0.2
PDGFB-202ENST00000381551 RASD1Q9Y272 281 aa13.78□□□□□ -0.2
PDGFB-202ENST00000381551 TMEM5Q9Y2B1 443 aa13.78□□□□□ -0.2
PDGFB-202ENST00000381551 UBR5O95071 2799 aaPredicted RBP13.78□□□□□ -0.2
PDGFB-202ENST00000381551 IGKV3D-15A0A087WSY6 115 aa13.77□□□□□ -0.21
PDGFB-202ENST00000381551 EFCAB9A8MZ26 197 aa13.77□□□□□ -0.21
PDGFB-202ENST00000381551 CDC42EP2O14613 210 aa13.77□□□□□ -0.21
PDGFB-202ENST00000381551 KLF4O43474 513 aa13.77□□□□□ -0.21
PDGFB-202ENST00000381551 RRP9O43818 475 aaKnown RBP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms