RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 LIPT2A6NK58 231 aa13.91□□□□□ -0.18
VCX3A-201ENST00000381089 STAMBPO95630 424 aa13.91□□□□□ -0.18
VCX3A-201ENST00000381089 LGI1O95970 557 aa13.91□□□□□ -0.18
VCX3A-201ENST00000381089 SERPINE1P05121 402 aa13.91□□□□□ -0.18
VCX3A-201ENST00000381089 DAOP14920 347 aa13.91□□□□□ -0.18
VCX3A-201ENST00000381089 SH3BGRP55822 239 aaPredicted RBP13.91□□□□□ -0.18
VCX3A-201ENST00000381089 COPZ1P61923 177 aa13.91□□□□□ -0.18
VCX3A-201ENST00000381089 NAAAQ02083 359 aa13.91□□□□□ -0.18
VCX3A-201ENST00000381089 EPS8Q12929 822 aa13.91□□□□□ -0.18
VCX3A-201ENST00000381089 ADIPOQQ15848 244 aa13.91□□□□□ -0.18
VCX3A-201ENST00000381089 PDCD2Q16342 344 aaPredicted RBP13.91□□□□□ -0.18
VCX3A-201ENST00000381089 LRRC74BQ6ZQY2 392 aa13.91□□□□□ -0.18
VCX3A-201ENST00000381089 ZIC4Q8N9L1 334 aa13.91□□□□□ -0.18
VCX3A-201ENST00000381089 LINC01356Q8N9X3 169 aa13.91□□□□□ -0.18
VCX3A-201ENST00000381089 TESCQ96BS2 214 aa13.91□□□□□ -0.18
VCX3A-201ENST00000381089 MTHFD2LQ9H903 347 aaPredicted RBP13.91□□□□□ -0.18
VCX3A-201ENST00000381089 ARPC4-TTLL3A0A0A6YYG9 625 aa13.9□□□□□ -0.18
VCX3A-201ENST00000381089 ZC3H12DA2A288 527 aaKnown RBP13.9□□□□□ -0.18
VCX3A-201ENST00000381089 HMGN4O00479 90 aa13.9□□□□□ -0.18
VCX3A-201ENST00000381089 DBIP07108 87 aaKnown RBP13.9□□□□□ -0.18
VCX3A-201ENST00000381089 HOXB1P14653 301 aaPredicted RBP13.9□□□□□ -0.18
VCX3A-201ENST00000381089 GIFP27352 417 aa13.9□□□□□ -0.18
VCX3A-201ENST00000381089 APEX1P27695 318 aaKnown RBP13.9□□□□□ -0.18
VCX3A-201ENST00000381089 ARRB2P32121 409 aa13.9□□□□□ -0.18
VCX3A-201ENST00000381089 PLAURQ03405 335 aa13.9□□□□□ -0.18
VCX3A-201ENST00000381089 ANKRD16Q6P6B7 361 aa13.9□□□□□ -0.18
VCX3A-201ENST00000381089 PEX5LQ8IYB4 626 aa13.9□□□□□ -0.18
VCX3A-201ENST00000381089 FAM169BQ8N8A8 192 aa13.9□□□□□ -0.18
VCX3A-201ENST00000381089 NUP37Q8NFH4 326 aa13.9□□□□□ -0.18
VCX3A-201ENST00000381089 MAGEE2Q8TD90 523 aaPredicted RBP13.9□□□□□ -0.18
VCX3A-201ENST00000381089 DYDC1Q8WWB3 177 aa13.9□□□□□ -0.18
VCX3A-201ENST00000381089 PPP1R36Q96LQ0 422 aa13.9□□□□□ -0.18
VCX3A-201ENST00000381089 ANKRD27Q96NW4 1050 aa13.9□□□□□ -0.18
VCX3A-201ENST00000381089 ALKBH3Q96Q83 286 aaPredicted RBP13.9□□□□□ -0.18
VCX3A-201ENST00000381089 ADAM19Q9H013 955 aa13.9□□□□□ -0.18
VCX3A-201ENST00000381089 ZNF442Q9H7R0 627 aa13.9□□□□□ -0.18
VCX3A-201ENST00000381089 AKTIPQ9H8T0 292 aa13.9□□□□□ -0.18
VCX3A-201ENST00000381089 DYNLRB1Q9NP97 96 aa13.9□□□□□ -0.18
VCX3A-201ENST00000381089 INTS9Q9NV88 658 aaKnown RBP13.9□□□□□ -0.18
VCX3A-201ENST00000381089 ADPRHL2Q9NX46 363 aa13.9□□□□□ -0.18
VCX3A-201ENST00000381089 CRNNQ9UBG3 495 aaPredicted RBP13.9□□□□□ -0.18
VCX3A-201ENST00000381089 LRP5LA4QPB2 252 aa13.89□□□□□ -0.19
VCX3A-201ENST00000381089 A8MVM7 634 aa13.89□□□□□ -0.19
VCX3A-201ENST00000381089 hCG_2039718K7EN88 272 aa13.89□□□□□ -0.19
VCX3A-201ENST00000381089 ITM2AO43736 263 aa13.89□□□□□ -0.19
VCX3A-201ENST00000381089 TACSTD2P09758 323 aa13.89□□□□□ -0.19
VCX3A-201ENST00000381089 CECR9P0C854 216 aa13.89□□□□□ -0.19
VCX3A-201ENST00000381089 NR2F1P10589 423 aa13.89□□□□□ -0.19
VCX3A-201ENST00000381089 S100A3P33764 101 aa13.89□□□□□ -0.19
VCX3A-201ENST00000381089 SCGB2A2Q13296 93 aa13.89□□□□□ -0.19
VCX3A-201ENST00000381089 SYPL1Q16563 259 aa13.89□□□□□ -0.19
VCX3A-201ENST00000381089 MRPL2Q5T653 305 aaKnown RBP13.89□□□□□ -0.19
VCX3A-201ENST00000381089 PRAMEF8Q5VWM4 474 aa13.89□□□□□ -0.19
VCX3A-201ENST00000381089 PRAMEF7Q5VXH5 474 aa13.89□□□□□ -0.19
VCX3A-201ENST00000381089 NIPAL3Q6P499 406 aa13.89□□□□□ -0.19
VCX3A-201ENST00000381089 C12orf54Q6X4T0 127 aa13.89□□□□□ -0.19
VCX3A-201ENST00000381089 MEX3DQ86XN8 651 aaKnown RBP13.89□□□□□ -0.19
VCX3A-201ENST00000381089 RNF130Q86XS8 419 aa13.89□□□□□ -0.19
VCX3A-201ENST00000381089 KIRREL3Q8IZU9 778 aa13.89□□□□□ -0.19
VCX3A-201ENST00000381089 ANKFN1Q8N957 763 aa13.89□□□□□ -0.19
VCX3A-201ENST00000381089 BCL2L2Q92843 193 aaPredicted RBP13.89□□□□□ -0.19
VCX3A-201ENST00000381089 SLC38A1Q9H2H9 487 aa13.89□□□□□ -0.19
VCX3A-201ENST00000381089 CACYBPQ9HB71 228 aaKnown RBP13.89□□□□□ -0.19
VCX3A-201ENST00000381089 BTNL2Q9UIR0 455 aa13.89□□□□□ -0.19
VCX3A-201ENST00000381089 RASD1Q9Y272 281 aa13.89□□□□□ -0.19
VCX3A-201ENST00000381089 A0A096LPE4 126 aa13.88□□□□□ -0.19
VCX3A-201ENST00000381089 A0A096LPI6 279 aa13.88□□□□□ -0.19
VCX3A-201ENST00000381089 A0A1W2PPZ6 126 aa13.88□□□□□ -0.19
VCX3A-201ENST00000381089 PRAMEF27A3QJZ7 478 aa13.88□□□□□ -0.19
VCX3A-201ENST00000381089 E9PBE3 544 aa13.88□□□□□ -0.19
VCX3A-201ENST00000381089 CHRM4P08173 479 aa13.88□□□□□ -0.19
VCX3A-201ENST00000381089 ITGA2P17301 1181 aa13.88□□□□□ -0.19
VCX3A-201ENST00000381089 NPR2P20594 1047 aa13.88□□□□□ -0.19
VCX3A-201ENST00000381089 GTF2E2P29084 291 aaKnown RBP13.88□□□□□ -0.19
VCX3A-201ENST00000381089 SELENOPP49908 381 aa13.88□□□□□ -0.19
VCX3A-201ENST00000381089 RUNX1T1Q06455 604 aa13.88□□□□□ -0.19
VCX3A-201ENST00000381089 LRRC74AQ0VAA2 488 aa13.88□□□□□ -0.19
VCX3A-201ENST00000381089 BST1Q10588 318 aa13.88□□□□□ -0.19
VCX3A-201ENST00000381089 STX3Q13277 289 aa13.88□□□□□ -0.19
VCX3A-201ENST00000381089 FAM174BQ3ZCQ3 159 aa13.88□□□□□ -0.19
VCX3A-201ENST00000381089 SPANXN4Q5MJ08 99 aa13.88□□□□□ -0.19
VCX3A-201ENST00000381089 WBP2NLQ6ICG8 309 aa13.88□□□□□ -0.19
VCX3A-201ENST00000381089 CREB3L2Q70SY1 520 aa13.88□□□□□ -0.19
VCX3A-201ENST00000381089 SPATA21Q7Z572 469 aa13.88□□□□□ -0.19
VCX3A-201ENST00000381089 ZNF786Q8N393 782 aa13.88□□□□□ -0.19
VCX3A-201ENST00000381089 CADM2Q8N3J6 435 aa13.88□□□□□ -0.19
VCX3A-201ENST00000381089 CCDC115Q96NT0 180 aa13.88□□□□□ -0.19
VCX3A-201ENST00000381089 PANX1Q96RD7 426 aa13.88□□□□□ -0.19
VCX3A-201ENST00000381089 SNX18Q96RF0 628 aa13.88□□□□□ -0.19
VCX3A-201ENST00000381089 SOX7Q9BT81 388 aa13.88□□□□□ -0.19
VCX3A-201ENST00000381089 LINC00470Q9BZP3 86 aa13.88□□□□□ -0.19
VCX3A-201ENST00000381089 CCDC154A6NI56 674 aa13.87□□□□□ -0.19
VCX3A-201ENST00000381089 NR5A2O00482 541 aa13.87□□□□□ -0.19
VCX3A-201ENST00000381089 IGKV3-15P01624 115 aa13.87□□□□□ -0.19
VCX3A-201ENST00000381089 IGLV1-44P01699 117 aa13.87□□□□□ -0.19
VCX3A-201ENST00000381089 IFNGR1P15260 489 aa13.87□□□□□ -0.19
VCX3A-201ENST00000381089 NCF2P19878 526 aaPredicted RBP13.87□□□□□ -0.19
VCX3A-201ENST00000381089 RPS4Y1P22090 263 aaKnown RBP13.87□□□□□ -0.19
VCX3A-201ENST00000381089 ABCE1P61221 599 aaKnown RBP13.87□□□□□ -0.19
VCX3A-201ENST00000381089 ROR2Q01974 943 aaKnown RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms