RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 ARL8BQ9NVJ2 186 aa8.21□□□□□ -1.1
HMGN1-202ENST00000380747 ADPRHL2Q9NX46 363 aa8.21□□□□□ -1.1
HMGN1-202ENST00000380747 ELOVL5Q9NYP7 299 aa8.21□□□□□ -1.1
HMGN1-202ENST00000380747 ADA2Q9NZK5 511 aa8.21□□□□□ -1.1
HMGN1-202ENST00000380747 CRIM1Q9NZV1 1036 aa8.21□□□□□ -1.1
HMGN1-202ENST00000380747 KCNN3Q9UGI6 736 aa8.21□□□□□ -1.1
HMGN1-202ENST00000380747 BAG5Q9UL15 447 aa8.21□□□□□ -1.1
HMGN1-202ENST00000380747 SH3GLB1Q9Y371 365 aa8.21□□□□□ -1.1
HMGN1-202ENST00000380747 DOCK7Q96N67 2140 aa8.2□□□□□ -1.1
HMGN1-202ENST00000380747 TMEM238LA0A1B0GVL6 79 aa8.2□□□□□ -1.1
HMGN1-202ENST00000380747 LIPT2A6NK58 231 aa8.2□□□□□ -1.1
HMGN1-202ENST00000380747 CXCR6O00574 342 aa8.2□□□□□ -1.1
HMGN1-202ENST00000380747 NDUFAB1O14561 156 aa8.2□□□□□ -1.1
HMGN1-202ENST00000380747 TPST2O60704 377 aa8.2□□□□□ -1.1
HMGN1-202ENST00000380747 EIF1BO60739 113 aaKnown RBP8.2□□□□□ -1.1
HMGN1-202ENST00000380747 FMO6PO60774 539 aa8.2□□□□□ -1.1
HMGN1-202ENST00000380747 RAMP1O60894 148 aa8.2□□□□□ -1.1
HMGN1-202ENST00000380747 AKR7A3O95154 331 aa8.2□□□□□ -1.1
HMGN1-202ENST00000380747 GPIP06744 558 aa8.2□□□□□ -1.1
HMGN1-202ENST00000380747 PTNP21246 168 aa8.2□□□□□ -1.1
HMGN1-202ENST00000380747 GTF2E2P29084 291 aaKnown RBP8.2□□□□□ -1.1
HMGN1-202ENST00000380747 RPS5P46782 204 aaKnown RBP8.2□□□□□ -1.1
HMGN1-202ENST00000380747 GSK3BP49841 420 aa8.2□□□□□ -1.1
HMGN1-202ENST00000380747 CDH12P55289 794 aa8.2□□□□□ -1.1
HMGN1-202ENST00000380747 NPTX1Q15818 432 aa8.2□□□□□ -1.1
HMGN1-202ENST00000380747 NRF1Q16656 503 aa8.2□□□□□ -1.1
HMGN1-202ENST00000380747 ENTPD8Q5MY95 495 aa8.2□□□□□ -1.1
HMGN1-202ENST00000380747 OTUD3Q5T2D3 398 aaPredicted RBP8.2□□□□□ -1.1
HMGN1-202ENST00000380747 FAM91A1Q658Y4 838 aa8.2□□□□□ -1.1
HMGN1-202ENST00000380747 ABLIM2Q6H8Q1 611 aa8.2□□□□□ -1.1
HMGN1-202ENST00000380747 C8orf82Q6P1X6 216 aaPredicted RBP8.2□□□□□ -1.1
HMGN1-202ENST00000380747 C6orf89Q6UWU4 347 aa8.2□□□□□ -1.1
HMGN1-202ENST00000380747 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.2□□□□□ -1.1
HMGN1-202ENST00000380747 CARM1Q86X55 608 aa8.2□□□□□ -1.1
HMGN1-202ENST00000380747 TMEM99Q8N816 258 aa8.2□□□□□ -1.1
HMGN1-202ENST00000380747 ANKS4BQ8N8V4 417 aa8.2□□□□□ -1.1
HMGN1-202ENST00000380747 CCDC197Q8NCU1 140 aa8.2□□□□□ -1.1
HMGN1-202ENST00000380747 FAM222BQ8WU58 562 aa8.2□□□□□ -1.1
HMGN1-202ENST00000380747 SLC38A4Q969I6 547 aa8.2□□□□□ -1.1
HMGN1-202ENST00000380747 TPD52L3Q96J77 140 aa8.2□□□□□ -1.1
HMGN1-202ENST00000380747 KCTD14Q9BQ13 255 aaPredicted RBP8.2□□□□□ -1.1
HMGN1-202ENST00000380747 BCO1Q9HAY6 547 aa8.2□□□□□ -1.1
HMGN1-202ENST00000380747 C12orf10Q9HB07 376 aa8.2□□□□□ -1.1
HMGN1-202ENST00000380747 FANCFQ9NPI8 374 aa8.2□□□□□ -1.1
HMGN1-202ENST00000380747 EMC3Q9P0I2 261 aa8.2□□□□□ -1.1
HMGN1-202ENST00000380747 C6orf203Q9P0P8 240 aaPredicted RBP8.2□□□□□ -1.1
HMGN1-202ENST00000380747 NDRG3Q9UGV2 375 aa8.2□□□□□ -1.1
HMGN1-202ENST00000380747 GDF2Q9UK05 429 aaPredicted RBP8.2□□□□□ -1.1
HMGN1-202ENST00000380747 ING1Q9UK53 422 aaPredicted RBP8.2□□□□□ -1.1
HMGN1-202ENST00000380747 ADAM21Q9UKJ8 722 aa8.2□□□□□ -1.1
HMGN1-202ENST00000380747 SLC9A8Q9Y2E8 581 aa8.2□□□□□ -1.1
HMGN1-202ENST00000380747 NOSIPQ9Y314 301 aaKnown RBP8.2□□□□□ -1.1
HMGN1-202ENST00000380747 HEATR5AQ86XA9 2040 aa8.2□□□□□ -1.1
HMGN1-202ENST00000380747 IGKV1D-42A0A075B6H8 117 aa8.19□□□□□ -1.1
HMGN1-202ENST00000380747 A0A087WUJ7 227 aa8.19□□□□□ -1.1
HMGN1-202ENST00000380747 ELOA3CA0A087WX78 387 aaPredicted RBP8.19□□□□□ -1.1
HMGN1-202ENST00000380747 A0A0B4J2E0 115 aa8.19□□□□□ -1.1
HMGN1-202ENST00000380747 A0A1B0GX12 115 aa8.19□□□□□ -1.1
HMGN1-202ENST00000380747 SH3D21A4FU49 640 aa8.19□□□□□ -1.1
HMGN1-202ENST00000380747 ZNF724A8MTY0 619 aa8.19□□□□□ -1.1
HMGN1-202ENST00000380747 C16orf97H3BN30 126 aa8.19□□□□□ -1.1
HMGN1-202ENST00000380747 GPR171O14626 319 aa8.19□□□□□ -1.1
HMGN1-202ENST00000380747 SHOX2O60902 331 aaPredicted RBP8.19□□□□□ -1.1
HMGN1-202ENST00000380747 ZNF682O95780 498 aa8.19□□□□□ -1.1
HMGN1-202ENST00000380747 CD99P14209 185 aa8.19□□□□□ -1.1
HMGN1-202ENST00000380747 NCK1P16333 377 aa8.19□□□□□ -1.1
HMGN1-202ENST00000380747 CBLP22681 906 aa8.19□□□□□ -1.1
HMGN1-202ENST00000380747 GSTT1P30711 240 aa8.19□□□□□ -1.1
HMGN1-202ENST00000380747 EGR4Q05215 589 aa8.19□□□□□ -1.1
HMGN1-202ENST00000380747 FOXD4Q12950 439 aaPredicted RBP8.19□□□□□ -1.1
HMGN1-202ENST00000380747 PDK3Q15120 406 aa8.19□□□□□ -1.1
HMGN1-202ENST00000380747 FBXW10Q5XX13 1052 aa8.19□□□□□ -1.1
HMGN1-202ENST00000380747 ANKRD34AQ69YU3 496 aa8.19□□□□□ -1.1
HMGN1-202ENST00000380747 TMEM225Q6GV28 225 aa8.19□□□□□ -1.1
HMGN1-202ENST00000380747 ZNF613Q6PF04 617 aa8.19□□□□□ -1.1
HMGN1-202ENST00000380747 PAQR6Q6TCH4 344 aa8.19□□□□□ -1.1
HMGN1-202ENST00000380747 TFAP2EQ6VUC0 442 aa8.19□□□□□ -1.1
HMGN1-202ENST00000380747 DEF8Q6ZN54 512 aa8.19□□□□□ -1.1
HMGN1-202ENST00000380747 BEND4Q6ZU67 534 aa8.19□□□□□ -1.1
HMGN1-202ENST00000380747 GALNT5Q7Z7M9 940 aa8.19□□□□□ -1.1
HMGN1-202ENST00000380747 TMEM200AQ86VY9 491 aa8.19□□□□□ -1.1
HMGN1-202ENST00000380747 ZNF100Q8IYN0 542 aa8.19□□□□□ -1.1
HMGN1-202ENST00000380747 FITM2Q8N6M3 262 aa8.19□□□□□ -1.1
HMGN1-202ENST00000380747 C10orf53Q8N6V4 93 aa8.19□□□□□ -1.1
HMGN1-202ENST00000380747 RNF148Q8N7C7 305 aa8.19□□□□□ -1.1
HMGN1-202ENST00000380747 FAM162AQ96A26 154 aa8.19□□□□□ -1.1
HMGN1-202ENST00000380747 KTI12Q96EK9 354 aaPredicted RBP8.19□□□□□ -1.1
HMGN1-202ENST00000380747 CXXC4Q9H2H0 198 aa8.19□□□□□ -1.1
HMGN1-202ENST00000380747 SPAG4Q9NPE6 437 aa8.19□□□□□ -1.1
HMGN1-202ENST00000380747 PRSS50Q9UI38 385 aa8.19□□□□□ -1.1
HMGN1-202ENST00000380747 JMJD1CQ15652 2540 aa8.19□□□□□ -1.1
HMGN1-202ENST00000380747 HCFC1P51610 2035 aa8.19□□□□□ -1.1
HMGN1-202ENST00000380747 TRAV36DV7A0A075B6V5 113 aa8.18□□□□□ -1.1
HMGN1-202ENST00000380747 IGKV3D-15A0A087WSY6 115 aa8.18□□□□□ -1.1
HMGN1-202ENST00000380747 TRAPPC13A5PLN9 417 aa8.18□□□□□ -1.1
HMGN1-202ENST00000380747 AQP7P3A6NL99 342 aa8.18□□□□□ -1.1
HMGN1-202ENST00000380747 ZNF716A6NP11 495 aa8.18□□□□□ -1.1
HMGN1-202ENST00000380747 CASKO14936 926 aa8.18□□□□□ -1.1
HMGN1-202ENST00000380747 CHP2O43745 196 aa8.18□□□□□ -1.1
HMGN1-202ENST00000380747 OR2T1O43869 369 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms