RNA–Protein interactions for RNA: ENST00000378815.10

RAB3IP-204, Transcript of RAB3A interacting protein, humanhuman

TSL 2 BASIC

Gene RAB3IP, Length 2,386 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-204ENST00000378815 ALG8Q9BVK2 526 aa13.95□□□□□ -0.18
RAB3IP-204ENST00000378815 SF3B6Q9Y3B4 125 aaKnown RBP13.95□□□□□ -0.18
RAB3IP-204ENST00000378815 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.94□□□□□ -0.18
RAB3IP-204ENST00000378815 DAPL1A0PJW8 107 aa13.94□□□□□ -0.18
RAB3IP-204ENST00000378815 AKAP8O43823 692 aaKnown RBP13.94□□□□□ -0.18
RAB3IP-204ENST00000378815 F13BP05160 661 aa13.94□□□□□ -0.18
RAB3IP-204ENST00000378815 MRPL3P09001 348 aaKnown RBP13.94□□□□□ -0.18
RAB3IP-204ENST00000378815 SDHAP31040 664 aa13.94□□□□□ -0.18
RAB3IP-204ENST00000378815 C5orf46Q6UWT4 87 aa13.94□□□□□ -0.18
RAB3IP-204ENST00000378815 TMPRSS11AQ6ZMR5 421 aa13.94□□□□□ -0.18
RAB3IP-204ENST00000378815 MAMDC2Q7Z304 686 aaPredicted RBP13.94□□□□□ -0.18
RAB3IP-204ENST00000378815 OR10H4Q8NGA5 316 aa13.94□□□□□ -0.18
RAB3IP-204ENST00000378815 ZPLD1Q8TCW7 415 aa13.94□□□□□ -0.18
RAB3IP-204ENST00000378815 SMPDL3BQ92485 455 aa13.94□□□□□ -0.18
RAB3IP-204ENST00000378815 NDEL1Q9GZM8 345 aa13.94□□□□□ -0.18
RAB3IP-204ENST00000378815 METTL7AQ9H8H3 244 aa13.94□□□□□ -0.18
RAB3IP-204ENST00000378815 ISG20L2Q9H9L3 353 aaKnown RBP13.94□□□□□ -0.18
RAB3IP-204ENST00000378815 EXOSC4Q9NPD3 245 aaKnown RBP13.94□□□□□ -0.18
RAB3IP-204ENST00000378815 SDHAF3Q9NRP4 125 aa13.94□□□□□ -0.18
RAB3IP-204ENST00000378815 TOR4AQ9NXH8 423 aa13.94□□□□□ -0.18
RAB3IP-204ENST00000378815 PPP4R1LQ9P1A2 415 aa13.94□□□□□ -0.18
RAB3IP-204ENST00000378815 TCFL5Q9UL49 500 aa13.94□□□□□ -0.18
RAB3IP-204ENST00000378815 WIF1Q9Y5W5 379 aa13.94□□□□□ -0.18
RAB3IP-204ENST00000378815 NSG1A0A0A6YYJ2 146 aa13.94□□□□□ -0.18
RAB3IP-204ENST00000378815 A0A1W2PNU3 283 aaPredicted RBP13.94□□□□□ -0.18
RAB3IP-204ENST00000378815 METTL15A6NJ78 407 aa13.94□□□□□ -0.18
RAB3IP-204ENST00000378815 C9orf172C9J069 976 aa13.94□□□□□ -0.18
RAB3IP-204ENST00000378815 RAB40ALP0C0E4 278 aa13.94□□□□□ -0.18
RAB3IP-204ENST00000378815 CASP3P42574 277 aa13.94□□□□□ -0.18
RAB3IP-204ENST00000378815 DIO1P49895 249 aa13.94□□□□□ -0.18
RAB3IP-204ENST00000378815 NUBP1P53384 320 aa13.94□□□□□ -0.18
RAB3IP-204ENST00000378815 SPEM2Q0P670 501 aa13.94□□□□□ -0.18
RAB3IP-204ENST00000378815 IL10RAQ13651 578 aa13.94□□□□□ -0.18
RAB3IP-204ENST00000378815 EMC4Q5J8M3 183 aa13.94□□□□□ -0.18
RAB3IP-204ENST00000378815 ARSKQ6UWY0 536 aa13.94□□□□□ -0.18
RAB3IP-204ENST00000378815 LSM14AQ8ND56 463 aaKnown RBP13.94□□□□□ -0.18
RAB3IP-204ENST00000378815 OR6Q1Q8NGQ2 317 aa13.94□□□□□ -0.18
RAB3IP-204ENST00000378815 CT55Q8WUE5 264 aa13.94□□□□□ -0.18
RAB3IP-204ENST00000378815 TBX5Q99593 518 aa13.94□□□□□ -0.18
RAB3IP-204ENST00000378815 NPAS1Q99742 590 aa13.94□□□□□ -0.18
RAB3IP-204ENST00000378815 ASB6Q9NWX5 421 aa13.94□□□□□ -0.18
RAB3IP-204ENST00000378815 TAS2R5Q9NYW4 299 aa13.94□□□□□ -0.18
RAB3IP-204ENST00000378815 SSR3Q9UNL2 185 aa13.94□□□□□ -0.18
RAB3IP-204ENST00000378815 CHCHD2Q9Y6H1 151 aaPredicted RBP13.94□□□□□ -0.18
RAB3IP-204ENST00000378815 A3GALT2U3KPV4 340 aa13.94□□□□□ -0.18
RAB3IP-204ENST00000378815 MPDZO75970 2070 aa13.93□□□□□ -0.18
RAB3IP-204ENST00000378815 SPI1P17947 270 aa13.93□□□□□ -0.18
RAB3IP-204ENST00000378815 GABRA5P31644 462 aa13.93□□□□□ -0.18
RAB3IP-204ENST00000378815 APOBEC1P41238 236 aaKnown RBP13.93□□□□□ -0.18
RAB3IP-204ENST00000378815 CDKN2AP42771 156 aaKnown RBP13.93□□□□□ -0.18
RAB3IP-204ENST00000378815 RPS25P62851 125 aaKnown RBP13.93□□□□□ -0.18
RAB3IP-204ENST00000378815 BDH1Q02338 343 aa13.93□□□□□ -0.18
RAB3IP-204ENST00000378815 LGALS3BPQ08380 585 aa13.93□□□□□ -0.18
RAB3IP-204ENST00000378815 PON3Q15166 354 aa13.93□□□□□ -0.18
RAB3IP-204ENST00000378815 SGCBQ16585 318 aa13.93□□□□□ -0.18
RAB3IP-204ENST00000378815 ZNF404Q494X3 552 aa13.93□□□□□ -0.18
RAB3IP-204ENST00000378815 SLC35D3Q5M8T2 416 aa13.93□□□□□ -0.18
RAB3IP-204ENST00000378815 LCN1P1Q5VSP4 162 aa13.93□□□□□ -0.18
RAB3IP-204ENST00000378815 LEG1Q6P5S2 330 aa13.93□□□□□ -0.18
RAB3IP-204ENST00000378815 PPP1R32Q7Z5V6 425 aa13.93□□□□□ -0.18
RAB3IP-204ENST00000378815 POMGNT2Q8NAT1 580 aa13.93□□□□□ -0.18
RAB3IP-204ENST00000378815 MCFD2Q8NI22 146 aa13.93□□□□□ -0.18
RAB3IP-204ENST00000378815 ZNRF4Q8WWF5 429 aa13.93□□□□□ -0.18
RAB3IP-204ENST00000378815 ZMYND19Q96E35 227 aaPredicted RBP13.93□□□□□ -0.18
RAB3IP-204ENST00000378815 TSPAN32Q96QS1 320 aa13.93□□□□□ -0.18
RAB3IP-204ENST00000378815 CDADC1Q9BWV3 514 aa13.93□□□□□ -0.18
RAB3IP-204ENST00000378815 ASPNQ9BXN1 380 aa13.93□□□□□ -0.18
RAB3IP-204ENST00000378815 OR11A1Q9GZK7 315 aa13.93□□□□□ -0.18
RAB3IP-204ENST00000378815 NXF2Q9GZY0 626 aaKnown RBP13.93□□□□□ -0.18
RAB3IP-204ENST00000378815 WDR70Q9NW82 654 aa13.93□□□□□ -0.18
RAB3IP-204ENST00000378815 RALGAPA1Q6GYQ0 2036 aa13.93□□□□□ -0.18
RAB3IP-204ENST00000378815 PCNX3Q9H6A9 2034 aa13.93□□□□□ -0.18
RAB3IP-204ENST00000378815 PNMA8CA0A1B0GUJ8 204 aa13.93□□□□□ -0.18
RAB3IP-204ENST00000378815 C4orf47A7E2U8 309 aa13.93□□□□□ -0.18
RAB3IP-204ENST00000378815 MT-CO3P00414 261 aa13.93□□□□□ -0.18
RAB3IP-204ENST00000378815 TCN2P20062 427 aa13.93□□□□□ -0.18
RAB3IP-204ENST00000378815 SLC25A1P53007 311 aa13.93□□□□□ -0.18
RAB3IP-204ENST00000378815 ACTC1P68032 377 aa13.93□□□□□ -0.18
RAB3IP-204ENST00000378815 ACTA1P68133 377 aa13.93□□□□□ -0.18
RAB3IP-204ENST00000378815 OR5J2Q8NH18 312 aa13.93□□□□□ -0.18
RAB3IP-204ENST00000378815 OR6S1Q8NH40 331 aa13.93□□□□□ -0.18
RAB3IP-204ENST00000378815 BORCS5Q969J3 196 aa13.93□□□□□ -0.18
RAB3IP-204ENST00000378815 TMEM203Q969S6 136 aa13.93□□□□□ -0.18
RAB3IP-204ENST00000378815 DNAJA3Q96EY1 480 aa13.93□□□□□ -0.18
RAB3IP-204ENST00000378815 MMP27Q9H306 513 aa13.93□□□□□ -0.18
RAB3IP-204ENST00000378815 ZNF160Q9HCG1 818 aa13.93□□□□□ -0.18
RAB3IP-204ENST00000378815 CPNE5Q9HCH3 593 aa13.93□□□□□ -0.18
RAB3IP-204ENST00000378815 AKIP1Q9NQ31 210 aa13.93□□□□□ -0.18
RAB3IP-204ENST00000378815 TXNL4BQ9NX01 149 aaKnown RBP13.93□□□□□ -0.18
RAB3IP-204ENST00000378815 BABAM2Q9NXR7 383 aa13.93□□□□□ -0.18
RAB3IP-204ENST00000378815 YARS2Q9Y2Z4 477 aaKnown RBP13.93□□□□□ -0.18
RAB3IP-204ENST00000378815 PCDHGA1Q9Y5H4 931 aa13.93□□□□□ -0.18
RAB3IP-204ENST00000378815 ZNF670-ZNF695F2Z2N8 137 aa13.92□□□□□ -0.18
RAB3IP-204ENST00000378815 RPS18P62269 152 aaKnown RBP13.92□□□□□ -0.18
RAB3IP-204ENST00000378815 ZNF85Q03923 595 aa13.92□□□□□ -0.18
RAB3IP-204ENST00000378815 SLC25A53Q5H9E4 307 aa13.92□□□□□ -0.18
RAB3IP-204ENST00000378815 GPR139Q6DWJ6 353 aa13.92□□□□□ -0.18
RAB3IP-204ENST00000378815 CD200R1LQ6Q8B3 271 aa13.92□□□□□ -0.18
RAB3IP-204ENST00000378815 JAZF1Q86VZ6 243 aa13.92□□□□□ -0.18
RAB3IP-204ENST00000378815 KLBQ86Z14 1044 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms