RNA–Protein interactions for RNA: ENST00000378182.3

TRIM13-202, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 7,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-202ENST00000378182 MRPL10Q7Z7H8 261 aaKnown RBP13.11□□□□□ -0.31
TRIM13-202ENST00000378182 UTP4Q969X6 686 aaKnown RBP13.11□□□□□ -0.31
TRIM13-202ENST00000378182 GALR3O60755 368 aaPredicted RBP13.11□□□□□ -0.31
TRIM13-202ENST00000378182 ARHGAP11BQ3KRB8 267 aa13.11□□□□□ -0.31
TRIM13-202ENST00000378182 PLA1AQ53H76 456 aa13.11□□□□□ -0.31
TRIM13-202ENST00000378182 FGF21Q9NSA1 209 aa13.11□□□□□ -0.31
TRIM13-202ENST00000378182 FBXO4Q9UKT5 387 aa13.11□□□□□ -0.31
TRIM13-202ENST00000378182 ZNF638Q14966 1978 aaKnown RBP13.11□□□□□ -0.31
TRIM13-202ENST00000378182 DEGS1O15121 323 aa13.11□□□□□ -0.31
TRIM13-202ENST00000378182 PRDX3P30048 256 aaKnown RBP13.11□□□□□ -0.31
TRIM13-202ENST00000378182 ZNF750Q32MQ0 723 aa13.11□□□□□ -0.31
TRIM13-202ENST00000378182 TMEM217Q8N7C4 229 aa13.11□□□□□ -0.31
TRIM13-202ENST00000378182 VN1R2Q8NFZ6 395 aa13.11□□□□□ -0.31
TRIM13-202ENST00000378182 ADAMTS16Q8TE57 1224 aa13.11□□□□□ -0.31
TRIM13-202ENST00000378182 HPSE2Q8WWQ2 592 aa13.11□□□□□ -0.31
TRIM13-202ENST00000378182 HYLS1Q96M11 299 aa13.11□□□□□ -0.31
TRIM13-202ENST00000378182 IER2Q9BTL4 223 aa13.11□□□□□ -0.31
TRIM13-202ENST00000378182 MMP28Q9H239 520 aa13.11□□□□□ -0.31
TRIM13-202ENST00000378182 THSD1Q9NS62 852 aa13.11□□□□□ -0.31
TRIM13-202ENST00000378182 ENPP4Q9Y6X5 453 aa13.11□□□□□ -0.31
TRIM13-202ENST00000378182 ZNF816-ZNF321PA0A0X1KG74 233 aa13.11□□□□□ -0.31
TRIM13-202ENST00000378182 BLACEA4D250 179 aa13.11□□□□□ -0.31
TRIM13-202ENST00000378182 ZNF814B7Z6K7 855 aa13.11□□□□□ -0.31
TRIM13-202ENST00000378182 SRPX2O60687 465 aaPredicted RBP13.11□□□□□ -0.31
TRIM13-202ENST00000378182 HACD4Q5VWC8 232 aa13.11□□□□□ -0.31
TRIM13-202ENST00000378182 ZNF321PQ8N8H1 164 aa13.11□□□□□ -0.31
TRIM13-202ENST00000378182 NRSN2Q9GZP1 204 aa13.11□□□□□ -0.31
TRIM13-202ENST00000378182 GALNT9Q9HCQ5 603 aa13.11□□□□□ -0.31
TRIM13-202ENST00000378182 H3BMQ9 156 aa13.11□□□□□ -0.31
TRIM13-202ENST00000378182 PMP2P02689 132 aa13.11□□□□□ -0.31
TRIM13-202ENST00000378182 FAM157BP0CG42 384 aa13.11□□□□□ -0.31
TRIM13-202ENST00000378182 HOXD9P28356 352 aaPredicted RBP13.11□□□□□ -0.31
TRIM13-202ENST00000378182 UBE2G2P60604 165 aa13.11□□□□□ -0.31
TRIM13-202ENST00000378182 ISCA2Q86U28 154 aa13.11□□□□□ -0.31
TRIM13-202ENST00000378182 TMEM200AQ86VY9 491 aa13.11□□□□□ -0.31
TRIM13-202ENST00000378182 WASH6PQ9NQA3 447 aa13.11□□□□□ -0.31
TRIM13-202ENST00000378182 MEGF11A6BM72 1044 aa13.1□□□□□ -0.31
TRIM13-202ENST00000378182 RNASET2O00584 256 aaKnown RBP13.1□□□□□ -0.31
TRIM13-202ENST00000378182 SORBS2O94875 1100 aaKnown RBP13.1□□□□□ -0.31
TRIM13-202ENST00000378182 FOSL1P15407 271 aa13.1□□□□□ -0.31
TRIM13-202ENST00000378182 TM4SF4P48230 202 aa13.1□□□□□ -0.31
TRIM13-202ENST00000378182 LTBQ06643 244 aa13.1□□□□□ -0.31
TRIM13-202ENST00000378182 TMEM244Q5VVB8 128 aa13.1□□□□□ -0.31
TRIM13-202ENST00000378182 MED25Q71SY5 747 aa13.1□□□□□ -0.31
TRIM13-202ENST00000378182 OR4F15Q8NGB8 312 aa13.1□□□□□ -0.31
TRIM13-202ENST00000378182 ZNF417Q8TAU3 575 aa13.1□□□□□ -0.31
TRIM13-202ENST00000378182 NT5C3BQ969T7 300 aa13.1□□□□□ -0.31
TRIM13-202ENST00000378182 ZNF75AQ96N20 296 aa13.1□□□□□ -0.31
TRIM13-202ENST00000378182 HRH4Q9H3N8 390 aa13.1□□□□□ -0.31
TRIM13-202ENST00000378182 PIGLQ9Y2B2 252 aa13.1□□□□□ -0.31
TRIM13-202ENST00000378182 A0A096LPE4 126 aa13.1□□□□□ -0.31
TRIM13-202ENST00000378182 A0A1W2PPZ6 126 aa13.1□□□□□ -0.31
TRIM13-202ENST00000378182 ALOX12BO75342 701 aa13.1□□□□□ -0.31
TRIM13-202ENST00000378182 RAB38P57729 211 aa13.1□□□□□ -0.31
TRIM13-202ENST00000378182 ZNF595Q8IYB9 648 aa13.1□□□□□ -0.31
TRIM13-202ENST00000378182 ZFP82Q8N141 532 aa13.1□□□□□ -0.31
TRIM13-202ENST00000378182 ZFAND1Q8TCF1 268 aa13.1□□□□□ -0.31
TRIM13-202ENST00000378182 PIGTQ969N2 578 aa13.1□□□□□ -0.31
TRIM13-202ENST00000378182 OR5K3A6NET4 321 aa13.1□□□□□ -0.31
TRIM13-202ENST00000378182 HIST1H1TP22492 207 aaPredicted RBP13.1□□□□□ -0.31
TRIM13-202ENST00000378182 PROZP22891 400 aa13.1□□□□□ -0.31
TRIM13-202ENST00000378182 PCGF2P35227 344 aa13.1□□□□□ -0.31
TRIM13-202ENST00000378182 ETV4P43268 484 aa13.1□□□□□ -0.31
TRIM13-202ENST00000378182 MC2RQ01718 297 aa13.1□□□□□ -0.31
TRIM13-202ENST00000378182 C17orf67Q0P5P2 114 aa13.1□□□□□ -0.31
TRIM13-202ENST00000378182 C18orf63Q68DL7 685 aa13.1□□□□□ -0.31
TRIM13-202ENST00000378182 CNIH2Q6PI25 160 aa13.1□□□□□ -0.31
TRIM13-202ENST00000378182 FAM111BQ6SJ93 734 aa13.1□□□□□ -0.31
TRIM13-202ENST00000378182 PINX1Q96BK5 328 aaKnown RBP13.1□□□□□ -0.31
TRIM13-202ENST00000378182 UBE2ZQ9H832 354 aaPredicted RBP13.1□□□□□ -0.31
TRIM13-202ENST00000378182 EBF1Q9UH73 591 aa13.1□□□□□ -0.31
TRIM13-202ENST00000378182 DNAJC15Q9Y5T4 150 aa13.1□□□□□ -0.31
TRIM13-202ENST00000378182 SERPINF1P36955 418 aa13.1□□□□□ -0.31
TRIM13-202ENST00000378182 HNRNPFP52597 415 aaKnown RBP13.1□□□□□ -0.31
TRIM13-202ENST00000378182 ILKQ13418 452 aa13.1□□□□□ -0.31
TRIM13-202ENST00000378182 SIMC1Q8NDZ2 872 aa13.1□□□□□ -0.31
TRIM13-202ENST00000378182 ACPTQ9BZG2 426 aa13.1□□□□□ -0.31
TRIM13-202ENST00000378182 MSTNO14793 375 aa13.1□□□□□ -0.31
TRIM13-202ENST00000378182 RGRP47804 291 aa13.1□□□□□ -0.31
TRIM13-202ENST00000378182 CTSL3PQ5NE16 218 aa13.1□□□□□ -0.31
TRIM13-202ENST00000378182 ZNF813Q6ZN06 617 aa13.1□□□□□ -0.31
TRIM13-202ENST00000378182 PDZD9Q8IXQ8 264 aa13.1□□□□□ -0.31
TRIM13-202ENST00000378182 ZNF439Q8NDP4 499 aa13.1□□□□□ -0.31
TRIM13-202ENST00000378182 ZFP90Q8TF47 636 aa13.1□□□□□ -0.31
TRIM13-202ENST00000378182 ERVMER34-1Q9H9K5 563 aa13.1□□□□□ -0.31
TRIM13-202ENST00000378182 TNFSF11O14788 317 aa13.1□□□□□ -0.31
TRIM13-202ENST00000378182 DPM1O60762 260 aa13.1□□□□□ -0.31
TRIM13-202ENST00000378182 PRKACAP17612 351 aa13.1□□□□□ -0.31
TRIM13-202ENST00000378182 EVI2BP34910 448 aa13.1□□□□□ -0.31
TRIM13-202ENST00000378182 RFLNAQ6ZTI6 216 aa13.1□□□□□ -0.31
TRIM13-202ENST00000378182 ETFBKMTQ8IXQ9 262 aa13.1□□□□□ -0.31
TRIM13-202ENST00000378182 SLC35G3Q8N808 338 aa13.1□□□□□ -0.31
TRIM13-202ENST00000378182 SUMF1Q8NBK3 374 aa13.1□□□□□ -0.31
TRIM13-202ENST00000378182 MFSD9Q8NBP5 474 aa13.1□□□□□ -0.31
TRIM13-202ENST00000378182 SLC25A31Q9H0C2 315 aa13.1□□□□□ -0.31
TRIM13-202ENST00000378182 NCBP2LA6PVI3 153 aaKnown RBP13.09□□□□□ -0.31
TRIM13-202ENST00000378182 ARPC1BO15143 372 aaKnown RBP13.09□□□□□ -0.31
TRIM13-202ENST00000378182 HTR2BP41595 481 aa13.09□□□□□ -0.31
TRIM13-202ENST00000378182 RAB5BP61020 215 aa13.09□□□□□ -0.31
TRIM13-202ENST00000378182 TNFRSF17Q02223 184 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms