RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 LCMT2O60294 686 aaKnown RBP13.92□□□□□ -0.18
NPHP4-201ENST00000378156 ATG12O94817 140 aa13.92□□□□□ -0.18
NPHP4-201ENST00000378156 AKAIN1P0CW23 69 aa13.92□□□□□ -0.18
NPHP4-201ENST00000378156 ZNF35P13682 527 aa13.92□□□□□ -0.18
NPHP4-201ENST00000378156 MMP11P24347 488 aa13.92□□□□□ -0.18
NPHP4-201ENST00000378156 ETV6P41212 452 aa13.92□□□□□ -0.18
NPHP4-201ENST00000378156 PPA1Q15181 289 aa13.92□□□□□ -0.18
NPHP4-201ENST00000378156 C14orf28Q4W4Y0 310 aa13.92□□□□□ -0.18
NPHP4-201ENST00000378156 LILRA6Q6PI73 481 aa13.92□□□□□ -0.18
NPHP4-201ENST00000378156 GIMAP5Q96F15 307 aa13.92□□□□□ -0.18
NPHP4-201ENST00000378156 RPS10P5Q9NQ39 176 aa13.92□□□□□ -0.18
NPHP4-201ENST00000378156 F5H5K5 113 aa13.92□□□□□ -0.18
NPHP4-201ENST00000378156 TSTD3H0UI37 97 aa13.92□□□□□ -0.18
NPHP4-201ENST00000378156 PLK5Q496M5 336 aa13.92□□□□□ -0.18
NPHP4-201ENST00000378156 MFSD12Q6NUT3 480 aa13.92□□□□□ -0.18
NPHP4-201ENST00000378156 OR5H6Q8NGV6 325 aa13.92□□□□□ -0.18
NPHP4-201ENST00000378156 DUSP19Q8WTR2 217 aa13.92□□□□□ -0.18
NPHP4-201ENST00000378156 TMEM68Q96MH6 324 aa13.92□□□□□ -0.18
NPHP4-201ENST00000378156 ZNF578Q96N58 590 aaPredicted RBP13.92□□□□□ -0.18
NPHP4-201ENST00000378156 SYNPO2LQ9H987 977 aa13.92□□□□□ -0.18
NPHP4-201ENST00000378156 LRFN1Q9P244 771 aa13.92□□□□□ -0.18
NPHP4-201ENST00000378156 FOCADQ5VW36 1801 aa13.91□□□□□ -0.18
NPHP4-201ENST00000378156 DCDC2BA2VCK2 349 aa13.91□□□□□ -0.18
NPHP4-201ENST00000378156 HRGP04196 525 aa13.91□□□□□ -0.18
NPHP4-201ENST00000378156 ARG2P78540 354 aa13.91□□□□□ -0.18
NPHP4-201ENST00000378156 C3orf38Q5JPI3 329 aa13.91□□□□□ -0.18
NPHP4-201ENST00000378156 LINC00299Q6ZSB3 139 aa13.91□□□□□ -0.18
NPHP4-201ENST00000378156 MS4A6EQ96DS6 147 aa13.91□□□□□ -0.18
NPHP4-201ENST00000378156 MALSU1Q96EH3 234 aa13.91□□□□□ -0.18
NPHP4-201ENST00000378156 LCORQ96JN0 433 aaPredicted RBP13.91□□□□□ -0.18
NPHP4-201ENST00000378156 FAM71F1Q96KD3 344 aaPredicted RBP13.91□□□□□ -0.18
NPHP4-201ENST00000378156 SLC46A1Q96NT5 459 aa13.91□□□□□ -0.18
NPHP4-201ENST00000378156 ZNF442Q9H7R0 627 aa13.91□□□□□ -0.18
NPHP4-201ENST00000378156 ZNF160Q9HCG1 818 aa13.91□□□□□ -0.18
NPHP4-201ENST00000378156 POU2F3Q9UKI9 436 aa13.91□□□□□ -0.18
NPHP4-201ENST00000378156 MMACHCQ9Y4U1 282 aa13.91□□□□□ -0.18
NPHP4-201ENST00000378156 NUP214P35658 2090 aaPredicted RBP13.91□□□□□ -0.18
NPHP4-201ENST00000378156 HCRTR1O43613 425 aa13.91□□□□□ -0.18
NPHP4-201ENST00000378156 SLC34A2O95436 690 aa13.91□□□□□ -0.18
NPHP4-201ENST00000378156 APEX1P27695 318 aaKnown RBP13.91□□□□□ -0.18
NPHP4-201ENST00000378156 CSNK1A1P48729 337 aa13.91□□□□□ -0.18
NPHP4-201ENST00000378156 AQP6Q13520 282 aa13.91□□□□□ -0.18
NPHP4-201ENST00000378156 FAM205BPQ63HN1 556 aa13.91□□□□□ -0.18
NPHP4-201ENST00000378156 PAPD4Q6PIY7 484 aaKnown RBP13.91□□□□□ -0.18
NPHP4-201ENST00000378156 FGF14Q92915 247 aa13.91□□□□□ -0.18
NPHP4-201ENST00000378156 C19orf12Q9NSK7 152 aa13.91□□□□□ -0.18
NPHP4-201ENST00000378156 F13BP05160 661 aa13.91□□□□□ -0.18
NPHP4-201ENST00000378156 ICAM2P13598 275 aa13.91□□□□□ -0.18
NPHP4-201ENST00000378156 PRKAR1BP31321 381 aa13.91□□□□□ -0.18
NPHP4-201ENST00000378156 GABRA5P31644 462 aa13.91□□□□□ -0.18
NPHP4-201ENST00000378156 CCDC71LQ8N9Z2 235 aa13.91□□□□□ -0.18
NPHP4-201ENST00000378156 OR52I1Q8NGK6 324 aa13.91□□□□□ -0.18
NPHP4-201ENST00000378156 BRIX1Q8TDN6 353 aaKnown RBP13.91□□□□□ -0.18
NPHP4-201ENST00000378156 GABARAPL1Q9H0R8 117 aa13.91□□□□□ -0.18
NPHP4-201ENST00000378156 INPP5EQ9NRR6 644 aa13.91□□□□□ -0.18
NPHP4-201ENST00000378156 SPHK1Q9NYA1 384 aa13.91□□□□□ -0.18
NPHP4-201ENST00000378156 PLEK2Q9NYT0 353 aa13.91□□□□□ -0.18
NPHP4-201ENST00000378156 MCTS1Q9ULC4 181 aaKnown RBP13.91□□□□□ -0.18
NPHP4-201ENST00000378156 DIMT1Q9UNQ2 313 aaKnown RBP13.91□□□□□ -0.18
NPHP4-201ENST00000378156 TRIM64A6NGJ6 449 aa13.91□□□□□ -0.18
NPHP4-201ENST00000378156 YKT6O15498 198 aa13.91□□□□□ -0.18
NPHP4-201ENST00000378156 POU3F1Q03052 451 aaPredicted RBP13.91□□□□□ -0.18
NPHP4-201ENST00000378156 PEA15Q15121 130 aa13.91□□□□□ -0.18
NPHP4-201ENST00000378156 ZNF674Q2M3X9 581 aa13.91□□□□□ -0.18
NPHP4-201ENST00000378156 TMEM196Q5HYL7 178 aa13.91□□□□□ -0.18
NPHP4-201ENST00000378156 DCAF12Q5T6F0 453 aa13.91□□□□□ -0.18
NPHP4-201ENST00000378156 SSX3Q99909 188 aa13.91□□□□□ -0.18
NPHP4-201ENST00000378156 FAM86C1Q9NVL1 165 aa13.91□□□□□ -0.18
NPHP4-201ENST00000378156 CTSLP07711 333 aa13.9□□□□□ -0.18
NPHP4-201ENST00000378156 GDF1P27539 372 aa13.9□□□□□ -0.18
NPHP4-201ENST00000378156 BDKRB2P30411 391 aa13.9□□□□□ -0.18
NPHP4-201ENST00000378156 HOXC8P31273 242 aa13.9□□□□□ -0.18
NPHP4-201ENST00000378156 RPS27AP62979 156 aaKnown RBP13.9□□□□□ -0.18
NPHP4-201ENST00000378156 UBA52P62987 128 aaKnown RBP13.9□□□□□ -0.18
NPHP4-201ENST00000378156 MEF2DQ14814 521 aa13.9□□□□□ -0.18
NPHP4-201ENST00000378156 SLC6A19Q695T7 634 aa13.9□□□□□ -0.18
NPHP4-201ENST00000378156 ASTLQ6HA08 431 aaPredicted RBP13.9□□□□□ -0.18
NPHP4-201ENST00000378156 CADM3Q8N126 398 aa13.9□□□□□ -0.18
NPHP4-201ENST00000378156 PATE1Q8WXA2 126 aa13.9□□□□□ -0.18
NPHP4-201ENST00000378156 NANOS1Q8WY41 292 aaKnown RBP13.9□□□□□ -0.18
NPHP4-201ENST00000378156 RSC1A1Q92681 617 aa13.9□□□□□ -0.18
NPHP4-201ENST00000378156 ABRACLQ9P1F3 81 aa13.9□□□□□ -0.18
NPHP4-201ENST00000378156 YARS2Q9Y2Z4 477 aaKnown RBP13.9□□□□□ -0.18
NPHP4-201ENST00000378156 ZNF175Q9Y473 711 aa13.9□□□□□ -0.18
NPHP4-201ENST00000378156 RPS19P39019 145 aaKnown RBP13.9□□□□□ -0.18
NPHP4-201ENST00000378156 AWAT2Q6E213 333 aa13.9□□□□□ -0.18
NPHP4-201ENST00000378156 EID2BQ96D98 161 aa13.9□□□□□ -0.18
NPHP4-201ENST00000378156 PRRT1Q99946 306 aa13.9□□□□□ -0.18
NPHP4-201ENST00000378156 SGPP1Q9BX95 441 aa13.9□□□□□ -0.18
NPHP4-201ENST00000378156 SIDT1Q9NXL6 827 aaKnown RBP13.9□□□□□ -0.18
NPHP4-201ENST00000378156 DAPP1Q9UN19 280 aa13.9□□□□□ -0.18
NPHP4-201ENST00000378156 COL11A2P13942 1736 aaPredicted RBP13.9□□□□□ -0.18
NPHP4-201ENST00000378156 SOCS6O14544 535 aa13.9□□□□□ -0.18
NPHP4-201ENST00000378156 SRFP11831 508 aa13.9□□□□□ -0.18
NPHP4-201ENST00000378156 TACR3P29371 465 aa13.9□□□□□ -0.18
NPHP4-201ENST00000378156 EEF1A1P68104 462 aaKnown RBP13.9□□□□□ -0.18
NPHP4-201ENST00000378156 RSU1Q15404 277 aa13.9□□□□□ -0.18
NPHP4-201ENST00000378156 BCL2A1Q16548 175 aa13.9□□□□□ -0.18
NPHP4-201ENST00000378156 TMEM64Q6YI46 380 aa13.9□□□□□ -0.18
NPHP4-201ENST00000378156 MED25Q71SY5 747 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms