RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 LGI1O95970 557 aa7.78□□□□□ -1.16
VPS36-201ENST00000378060 TEAD1P28347 426 aa7.78□□□□□ -1.16
VPS36-201ENST00000378060 BDKRB2P30411 391 aa7.78□□□□□ -1.16
VPS36-201ENST00000378060 PTGER1P34995 402 aa7.78□□□□□ -1.16
VPS36-201ENST00000378060 MRPL19P49406 292 aaKnown RBP7.78□□□□□ -1.16
VPS36-201ENST00000378060 ARF3P61204 181 aaPredicted RBP7.78□□□□□ -1.16
VPS36-201ENST00000378060 ARF1P84077 181 aaKnown RBP7.78□□□□□ -1.16
VPS36-201ENST00000378060 ZNF169Q14929 603 aaPredicted RBP7.78□□□□□ -1.16
VPS36-201ENST00000378060 EIF2S3LQ2VIR3 472 aaKnown RBP7.78□□□□□ -1.16
VPS36-201ENST00000378060 ZNF542PQ5EBM4 170 aa7.78□□□□□ -1.16
VPS36-201ENST00000378060 ZMAT1Q5H9K5 638 aa7.78□□□□□ -1.16
VPS36-201ENST00000378060 RAET1LQ5VY80 246 aa7.78□□□□□ -1.16
VPS36-201ENST00000378060 TIGD3Q6B0B8 471 aa7.78□□□□□ -1.16
VPS36-201ENST00000378060 FAM122CQ6P4D5 195 aa7.78□□□□□ -1.16
VPS36-201ENST00000378060 USP51Q70EK9 711 aa7.78□□□□□ -1.16
VPS36-201ENST00000378060 GAREM2Q75VX8 874 aa7.78□□□□□ -1.16
VPS36-201ENST00000378060 SIAH3Q8IW03 269 aa7.78□□□□□ -1.16
VPS36-201ENST00000378060 MR1Q95460 341 aa7.78□□□□□ -1.16
VPS36-201ENST00000378060 TNFRSF13CQ96RJ3 184 aa7.78□□□□□ -1.16
VPS36-201ENST00000378060 SLC25A21Q9BQT8 299 aaPredicted RBP7.78□□□□□ -1.16
VPS36-201ENST00000378060 HCAR1Q9BXC0 346 aa7.78□□□□□ -1.16
VPS36-201ENST00000378060 GSX2Q9BZM3 304 aa7.78□□□□□ -1.16
VPS36-201ENST00000378060 GALNT9Q9HCQ5 603 aa7.78□□□□□ -1.16
VPS36-201ENST00000378060 SLC6A20Q9NP91 592 aa7.78□□□□□ -1.16
VPS36-201ENST00000378060 NDUFB11Q9NX14 153 aa7.78□□□□□ -1.16
VPS36-201ENST00000378060 B4GALT7Q9UBV7 327 aa7.78□□□□□ -1.16
VPS36-201ENST00000378060 BOLA1Q9Y3E2 137 aa7.78□□□□□ -1.16
VPS36-201ENST00000378060 TMEM269A0A1B0GVZ9 245 aa7.78□□□□□ -1.16
VPS36-201ENST00000378060 DPM1O60762 260 aa7.78□□□□□ -1.16
VPS36-201ENST00000378060 ZNF35P13682 527 aa7.78□□□□□ -1.16
VPS36-201ENST00000378060 DRD1P21728 446 aa7.78□□□□□ -1.16
VPS36-201ENST00000378060 TRIM23P36406 574 aa7.78□□□□□ -1.16
VPS36-201ENST00000378060 CTBSQ01459 385 aa7.78□□□□□ -1.16
VPS36-201ENST00000378060 YIF1BQ5BJH7 314 aa7.78□□□□□ -1.16
VPS36-201ENST00000378060 SLC35D3Q5M8T2 416 aa7.78□□□□□ -1.16
VPS36-201ENST00000378060 ABHD17CQ6PCB6 329 aa7.78□□□□□ -1.16
VPS36-201ENST00000378060 GDF7Q7Z4P5 450 aa7.78□□□□□ -1.16
VPS36-201ENST00000378060 CMTM1Q8IZ96 169 aa7.78□□□□□ -1.16
VPS36-201ENST00000378060 ADGRF3Q8IZF5 1079 aa7.78□□□□□ -1.16
VPS36-201ENST00000378060 DNAAF1Q8NEP3 725 aa7.78□□□□□ -1.16
VPS36-201ENST00000378060 IL17RDQ8NFM7 739 aa7.78□□□□□ -1.16
VPS36-201ENST00000378060 STEAP2Q8NFT2 490 aa7.78□□□□□ -1.16
VPS36-201ENST00000378060 OR6F1Q8NGZ6 308 aa7.78□□□□□ -1.16
VPS36-201ENST00000378060 CDCA3Q99618 268 aaPredicted RBP7.78□□□□□ -1.16
VPS36-201ENST00000378060 KATNB1Q9BVA0 655 aa7.78□□□□□ -1.16
VPS36-201ENST00000378060 KCMF1Q9P0J7 381 aa7.78□□□□□ -1.16
VPS36-201ENST00000378060 PRSS38A1L453 326 aa7.78□□□□□ -1.16
VPS36-201ENST00000378060 ANKRD34BA5PLL1 514 aa7.78□□□□□ -1.16
VPS36-201ENST00000378060 ACOD1A6NK06 481 aa7.78□□□□□ -1.16
VPS36-201ENST00000378060 EFCAB7A8K855 629 aa7.78□□□□□ -1.16
VPS36-201ENST00000378060 FAM227AF5H4B4 570 aa7.78□□□□□ -1.16
VPS36-201ENST00000378060 RFXAPO00287 272 aa7.78□□□□□ -1.16
VPS36-201ENST00000378060 GPX5O75715 221 aa7.78□□□□□ -1.16
VPS36-201ENST00000378060 IL33O95760 270 aa7.78□□□□□ -1.16
VPS36-201ENST00000378060 ZDHHC11BP0C7U3 371 aa7.78□□□□□ -1.16
VPS36-201ENST00000378060 OR8G3PP0DMU2 310 aa7.78□□□□□ -1.16
VPS36-201ENST00000378060 TUBG1P23258 451 aa7.78□□□□□ -1.16
VPS36-201ENST00000378060 S100A11P31949 105 aa7.78□□□□□ -1.16
VPS36-201ENST00000378060 RAB38P57729 211 aa7.78□□□□□ -1.16
VPS36-201ENST00000378060 TAS2R20P59543 309 aa7.78□□□□□ -1.16
VPS36-201ENST00000378060 ACY1Q03154 408 aa7.78□□□□□ -1.16
VPS36-201ENST00000378060 DPY19L2P2Q6ZN68 376 aa7.78□□□□□ -1.16
VPS36-201ENST00000378060 PGAP1Q75T13 922 aa7.78□□□□□ -1.16
VPS36-201ENST00000378060 VASH1Q7L8A9 365 aaPredicted RBP7.78□□□□□ -1.16
VPS36-201ENST00000378060 SLC16A9Q7RTY1 509 aa7.78□□□□□ -1.16
VPS36-201ENST00000378060 ZNF454Q8N9F8 522 aa7.78□□□□□ -1.16
VPS36-201ENST00000378060 STK35Q8TDR2 534 aa7.78□□□□□ -1.16
VPS36-201ENST00000378060 RNF128Q8TEB7 428 aa7.78□□□□□ -1.16
VPS36-201ENST00000378060 DUSP19Q8WTR2 217 aa7.78□□□□□ -1.16
VPS36-201ENST00000378060 FAM71F1Q96KD3 344 aaPredicted RBP7.78□□□□□ -1.16
VPS36-201ENST00000378060 SLC22A12Q96S37 553 aa7.78□□□□□ -1.16
VPS36-201ENST00000378060 ADOQ96SZ5 270 aa7.78□□□□□ -1.16
VPS36-201ENST00000378060 ZNF160Q9HCG1 818 aa7.78□□□□□ -1.16
VPS36-201ENST00000378060 SUSD2Q9UGT4 822 aa7.78□□□□□ -1.16
VPS36-201ENST00000378060 ATXN7L1Q9ULK2 861 aaPredicted RBP7.78□□□□□ -1.16
VPS36-201ENST00000378060 SRPK3Q9UPE1 567 aa7.78□□□□□ -1.16
VPS36-201ENST00000378060 A0A0A6YYH2 397 aa7.77□□□□□ -1.16
VPS36-201ENST00000378060 FAM230AA0A1W2PPH8 454 aa7.77□□□□□ -1.16
VPS36-201ENST00000378060 A6NJ64 397 aa7.77□□□□□ -1.16
VPS36-201ENST00000378060 FTCDNL1E5RQL4 147 aa7.77□□□□□ -1.16
VPS36-201ENST00000378060 H0YGG7 62 aa7.77□□□□□ -1.16
VPS36-201ENST00000378060 PLPP1O14494 284 aa7.77□□□□□ -1.16
VPS36-201ENST00000378060 SOCS6O14544 535 aa7.77□□□□□ -1.16
VPS36-201ENST00000378060 ZNF264O43296 627 aa7.77□□□□□ -1.16
VPS36-201ENST00000378060 SSX5O60225 188 aa7.77□□□□□ -1.16
VPS36-201ENST00000378060 PRR35P0CG20 571 aa7.77□□□□□ -1.16
VPS36-201ENST00000378060 CPEP16870 476 aa7.77□□□□□ -1.16
VPS36-201ENST00000378060 CEBPBP17676 345 aa7.77□□□□□ -1.16
VPS36-201ENST00000378060 PRPH2P23942 346 aa7.77□□□□□ -1.16
VPS36-201ENST00000378060 AKR1C2P52895 323 aa7.77□□□□□ -1.16
VPS36-201ENST00000378060 EMP2P54851 167 aa7.77□□□□□ -1.16
VPS36-201ENST00000378060 CSNK1G2P78368 415 aa7.77□□□□□ -1.16
VPS36-201ENST00000378060 NFATC4Q14934 902 aa7.77□□□□□ -1.16
VPS36-201ENST00000378060 EEF1A1P5Q5VTE0 462 aa7.77□□□□□ -1.16
VPS36-201ENST00000378060 SAXO2Q658L1 398 aa7.77□□□□□ -1.16
VPS36-201ENST00000378060 MFSD12Q6NUT3 480 aa7.77□□□□□ -1.16
VPS36-201ENST00000378060 RAB11FIP2Q7L804 512 aa7.77□□□□□ -1.16
VPS36-201ENST00000378060 ZFAND1Q8TCF1 268 aa7.77□□□□□ -1.16
VPS36-201ENST00000378060 TOMM40LQ969M1 308 aa7.77□□□□□ -1.16
VPS36-201ENST00000378060 TMEM106AQ96A25 262 aa7.77□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms