RNA–Protein interactions for RNA: ENST00000377344.6

CBWD3-203, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-203ENST00000377344 NHSL2Q5HYW2 709 aa11.63□□□□□ -0.55
CBWD3-203ENST00000377344 Q6ZPB1 254 aaPredicted RBP11.63□□□□□ -0.55
CBWD3-203ENST00000377344 DHRSXQ8N5I4 330 aa11.63□□□□□ -0.55
CBWD3-203ENST00000377344 OR52L1Q8NGH7 329 aa11.63□□□□□ -0.55
CBWD3-203ENST00000377344 OR5J2Q8NH18 312 aa11.63□□□□□ -0.55
CBWD3-203ENST00000377344 OR10D3Q8NH80 312 aa11.63□□□□□ -0.55
CBWD3-203ENST00000377344 OR2V1Q8NHB1 315 aa11.63□□□□□ -0.55
CBWD3-203ENST00000377344 LIPHQ8WWY8 451 aa11.63□□□□□ -0.55
CBWD3-203ENST00000377344 OSTF1Q92882 214 aa11.63□□□□□ -0.55
CBWD3-203ENST00000377344 SAMD8Q96LT4 415 aa11.63□□□□□ -0.55
CBWD3-203ENST00000377344 ZNF570Q96NI8 536 aa11.63□□□□□ -0.55
CBWD3-203ENST00000377344 TIMP4Q99727 224 aa11.63□□□□□ -0.55
CBWD3-203ENST00000377344 PLA2G12AQ9BZM1 189 aa11.63□□□□□ -0.55
CBWD3-203ENST00000377344 MCCC2Q9HCC0 563 aa11.63□□□□□ -0.55
CBWD3-203ENST00000377344 ALKBH4Q9NXW9 302 aa11.63□□□□□ -0.55
CBWD3-203ENST00000377344 SIGLEC7Q9Y286 467 aa11.63□□□□□ -0.55
CBWD3-203ENST00000377344 CORINQ9Y5Q5 1042 aa11.63□□□□□ -0.55
CBWD3-203ENST00000377344 CDH10Q9Y6N8 788 aa11.63□□□□□ -0.55
CBWD3-203ENST00000377344 MAP1BP46821 2468 aaKnown RBP11.62□□□□□ -0.55
CBWD3-203ENST00000377344 SPENQ96T58 3664 aaKnown RBP11.62□□□□□ -0.55
CBWD3-203ENST00000377344 ITPR1Q14643 2758 aa11.62□□□□□ -0.55
CBWD3-203ENST00000377344 TPRP12270 2363 aaKnown RBP11.62□□□□□ -0.55
CBWD3-203ENST00000377344 NPIPA2E9PIF3 369 aa11.62□□□□□ -0.55
CBWD3-203ENST00000377344 C11orf98E9PRG8 122 aa11.62□□□□□ -0.55
CBWD3-203ENST00000377344 NPIPA3F8WFD2 350 aa11.62□□□□□ -0.55
CBWD3-203ENST00000377344 PTP4A3O75365 173 aa11.62□□□□□ -0.55
CBWD3-203ENST00000377344 SERPINI2O75830 405 aa11.62□□□□□ -0.55
CBWD3-203ENST00000377344 TP53P04637 393 aaPredicted RBP11.62□□□□□ -0.55
CBWD3-203ENST00000377344 ADORA3P0DMS8 318 aa11.62□□□□□ -0.55
CBWD3-203ENST00000377344 ZNF708P17019 499 aa11.62□□□□□ -0.55
CBWD3-203ENST00000377344 EPHA2P29317 976 aa11.62□□□□□ -0.55
CBWD3-203ENST00000377344 RPL4P36578 427 aaKnown RBP11.62□□□□□ -0.55
CBWD3-203ENST00000377344 HSPA13P48723 471 aa11.62□□□□□ -0.55
CBWD3-203ENST00000377344 CLDN15P56746 228 aa11.62□□□□□ -0.55
CBWD3-203ENST00000377344 PTGES3Q15185 160 aaKnown RBP11.62□□□□□ -0.55
CBWD3-203ENST00000377344 C6orf52Q5T4I8 152 aa11.62□□□□□ -0.55
CBWD3-203ENST00000377344 WLSQ5T9L3 541 aa11.62□□□□□ -0.55
CBWD3-203ENST00000377344 TMEM236Q5W0B7 351 aa11.62□□□□□ -0.55
CBWD3-203ENST00000377344 RPL13AP3Q6NVV1 102 aa11.62□□□□□ -0.55
CBWD3-203ENST00000377344 CHMP1BQ7LBR1 199 aa11.62□□□□□ -0.55
CBWD3-203ENST00000377344 IGFN1Q86VF2 1251 aa11.62□□□□□ -0.55
CBWD3-203ENST00000377344 MOSPD2Q8NHP6 518 aa11.62□□□□□ -0.55
CBWD3-203ENST00000377344 ZHX1-C8orf76Q96EF9 292 aa11.62□□□□□ -0.55
CBWD3-203ENST00000377344 ADI1Q9BV57 179 aa11.62□□□□□ -0.55
CBWD3-203ENST00000377344 TSSK6Q9BXA6 273 aa11.62□□□□□ -0.55
CBWD3-203ENST00000377344 GABARAPL3Q9BY60 117 aa11.62□□□□□ -0.55
CBWD3-203ENST00000377344 TIGARQ9NQ88 270 aa11.62□□□□□ -0.55
CBWD3-203ENST00000377344 FAM118AQ9NWS6 357 aa11.62□□□□□ -0.55
CBWD3-203ENST00000377344 CAMK2AQ9UQM7 478 aa11.62□□□□□ -0.55
CBWD3-203ENST00000377344 PKD1L2Q7Z442 2459 aa11.62□□□□□ -0.55
CBWD3-203ENST00000377344 BSNQ9UPA5 3926 aa11.62□□□□□ -0.55
CBWD3-203ENST00000377344 IGHV3-15A0A0B4J1V0 119 aa11.61□□□□□ -0.55
CBWD3-203ENST00000377344 TTLL8A6PVC2 850 aa11.61□□□□□ -0.55
CBWD3-203ENST00000377344 RNF13O43567 381 aa11.61□□□□□ -0.55
CBWD3-203ENST00000377344 NDUFB2O95178 105 aa11.61□□□□□ -0.55
CBWD3-203ENST00000377344 F13BP05160 661 aa11.61□□□□□ -0.55
CBWD3-203ENST00000377344 FXYD6P3P58550 94 aa11.61□□□□□ -0.55
CBWD3-203ENST00000377344 PRPS1P60891 318 aa11.61□□□□□ -0.55
CBWD3-203ENST00000377344 RPS3AP61247 264 aaKnown RBP11.61□□□□□ -0.55
CBWD3-203ENST00000377344 RPS4XP62701 263 aaKnown RBP11.61□□□□□ -0.55
CBWD3-203ENST00000377344 RPL18Q07020 188 aaKnown RBP11.61□□□□□ -0.55
CBWD3-203ENST00000377344 BCL2A1Q16548 175 aa11.61□□□□□ -0.55
CBWD3-203ENST00000377344 ALG10Q5BKT4 473 aa11.61□□□□□ -0.55
CBWD3-203ENST00000377344 ARHGAP11AQ6P4F7 1023 aa11.61□□□□□ -0.55
CBWD3-203ENST00000377344 H1FNTQ75WM6 255 aaPredicted RBP11.61□□□□□ -0.55
CBWD3-203ENST00000377344 GHDCQ8N2G8 530 aa11.61□□□□□ -0.55
CBWD3-203ENST00000377344 KDM8Q8N371 416 aa11.61□□□□□ -0.55
CBWD3-203ENST00000377344 IQCF1Q8N6M8 205 aa11.61□□□□□ -0.55
CBWD3-203ENST00000377344 TMEM99Q8N816 258 aa11.61□□□□□ -0.55
CBWD3-203ENST00000377344 OR8D4Q8NGM9 314 aa11.61□□□□□ -0.55
CBWD3-203ENST00000377344 FAR1Q8WVX9 515 aa11.61□□□□□ -0.55
CBWD3-203ENST00000377344 SNRNP40Q96DI7 357 aaKnown RBP11.61□□□□□ -0.55
CBWD3-203ENST00000377344 ADGRG7Q96K78 797 aa11.61□□□□□ -0.55
CBWD3-203ENST00000377344 GPR137Q96N19 417 aa11.61□□□□□ -0.55
CBWD3-203ENST00000377344 IFT27Q9BW83 186 aa11.61□□□□□ -0.55
CBWD3-203ENST00000377344 SRXN1Q9BYN0 137 aa11.61□□□□□ -0.55
CBWD3-203ENST00000377344 CHST11Q9NPF2 352 aa11.61□□□□□ -0.55
CBWD3-203ENST00000377344 MRPL39Q9NYK5 338 aaKnown RBP11.61□□□□□ -0.55
CBWD3-203ENST00000377344 IL20Q9NYY1 176 aa11.61□□□□□ -0.55
CBWD3-203ENST00000377344 HIF3AQ9Y2N7 669 aa11.61□□□□□ -0.55
CBWD3-203ENST00000377344 ZNF407Q9C0G0 2248 aa11.61□□□□□ -0.55
CBWD3-203ENST00000377344 NBEAQ8NFP9 2946 aa11.61□□□□□ -0.55
CBWD3-203ENST00000377344 LOC100130705A0A1B0GUX0 176 aa11.6□□□□□ -0.55
CBWD3-203ENST00000377344 A0A1B0GVC2 190 aa11.6□□□□□ -0.55
CBWD3-203ENST00000377344 AQP7O14520 342 aa11.6□□□□□ -0.55
CBWD3-203ENST00000377344 EIF1BO60739 113 aaKnown RBP11.6□□□□□ -0.55
CBWD3-203ENST00000377344 SLC6A6P31641 620 aa11.6□□□□□ -0.55
CBWD3-203ENST00000377344 UQCRC1P31930 480 aa11.6□□□□□ -0.55
CBWD3-203ENST00000377344 CAPGP40121 348 aa11.6□□□□□ -0.55
CBWD3-203ENST00000377344 RAC3P60763 192 aa11.6□□□□□ -0.55
CBWD3-203ENST00000377344 FHL1Q13642 323 aa11.6□□□□□ -0.55
CBWD3-203ENST00000377344 ANKDD1AQ495B1 522 aa11.6□□□□□ -0.55
CBWD3-203ENST00000377344 PRR30Q53SZ7 412 aaPredicted RBP11.6□□□□□ -0.55
CBWD3-203ENST00000377344 TMEM225Q6GV28 225 aa11.6□□□□□ -0.55
CBWD3-203ENST00000377344 PCSK4Q6UW60 755 aa11.6□□□□□ -0.55
CBWD3-203ENST00000377344 THSD4Q6ZMP0 1018 aa11.6□□□□□ -0.55
CBWD3-203ENST00000377344 GPAT4Q86UL3 456 aa11.6□□□□□ -0.55
CBWD3-203ENST00000377344 CCDC103Q8IW40 242 aa11.6□□□□□ -0.55
CBWD3-203ENST00000377344 CLDN22Q8N7P3 220 aa11.6□□□□□ -0.55
CBWD3-203ENST00000377344 SCAIQ8N9R8 606 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms