RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 ANKRD34CP0C6C1 535 aa11.85□□□□□ -0.51
USP11-204ENST00000377107 SPI1P17947 270 aa11.85□□□□□ -0.51
USP11-204ENST00000377107 ACAA2P42765 397 aaKnown RBP11.85□□□□□ -0.51
USP11-204ENST00000377107 GRM7Q14831 915 aa11.85□□□□□ -0.51
USP11-204ENST00000377107 FHL5Q5TD97 284 aa11.85□□□□□ -0.51
USP11-204ENST00000377107 FGD2Q7Z6J4 655 aa11.85□□□□□ -0.51
USP11-204ENST00000377107 ZNF321PQ8N8H1 164 aa11.85□□□□□ -0.51
USP11-204ENST00000377107 LSM14AQ8ND56 463 aaKnown RBP11.85□□□□□ -0.51
USP11-204ENST00000377107 OR8S1Q8NH09 359 aa11.85□□□□□ -0.51
USP11-204ENST00000377107 CREB3L1Q96BA8 519 aa11.85□□□□□ -0.51
USP11-204ENST00000377107 STACQ99469 402 aa11.85□□□□□ -0.51
USP11-204ENST00000377107 SARGQ9BW04 601 aa11.85□□□□□ -0.51
USP11-204ENST00000377107 TRPV4Q9HBA0 871 aa11.85□□□□□ -0.51
USP11-204ENST00000377107 RXFP3Q9NSD7 469 aa11.85□□□□□ -0.51
USP11-204ENST00000377107 ZNF69Q9UC07 566 aa11.85□□□□□ -0.51
USP11-204ENST00000377107 ANXA2P2A6NMY6 339 aa11.84□□□□□ -0.51
USP11-204ENST00000377107 CENPBD1B2RD01 187 aa11.84□□□□□ -0.51
USP11-204ENST00000377107 ANXA2P07355 339 aaKnown RBP11.84□□□□□ -0.51
USP11-204ENST00000377107 SMIM10L1P0DMW3 83 aa11.84□□□□□ -0.51
USP11-204ENST00000377107 ANXA3P12429 323 aa11.84□□□□□ -0.51
USP11-204ENST00000377107 GABRG2P18507 467 aa11.84□□□□□ -0.51
USP11-204ENST00000377107 DNASE1P24855 282 aa11.84□□□□□ -0.51
USP11-204ENST00000377107 SLC6A1P30531 599 aa11.84□□□□□ -0.51
USP11-204ENST00000377107 VEGFCP49767 419 aa11.84□□□□□ -0.51
USP11-204ENST00000377107 GFERP55789 205 aa11.84□□□□□ -0.51
USP11-204ENST00000377107 CDK5R1Q15078 307 aa11.84□□□□□ -0.51
USP11-204ENST00000377107 SMAD2Q15796 467 aaKnown RBP11.84□□□□□ -0.51
USP11-204ENST00000377107 C1orf189Q5VU69 101 aa11.84□□□□□ -0.51
USP11-204ENST00000377107 DPY19L4Q7Z388 723 aa11.84□□□□□ -0.51
USP11-204ENST00000377107 KDM8Q8N371 416 aa11.84□□□□□ -0.51
USP11-204ENST00000377107 TSEN15Q8WW01 171 aaKnown RBP11.84□□□□□ -0.51
USP11-204ENST00000377107 SMIM10Q96HG1 83 aa11.84□□□□□ -0.51
USP11-204ENST00000377107 MS4A3Q96HJ5 214 aa11.84□□□□□ -0.51
USP11-204ENST00000377107 MOGAT1Q96PD6 335 aa11.84□□□□□ -0.51
USP11-204ENST00000377107 SYNDIG1Q9H7V2 258 aa11.84□□□□□ -0.51
USP11-204ENST00000377107 WBP1LQ9NX94 342 aa11.84□□□□□ -0.51
USP11-204ENST00000377107 PTPRSQ13332 1948 aa11.84□□□□□ -0.51
USP11-204ENST00000377107 OR5K3A6NET4 321 aa11.84□□□□□ -0.51
USP11-204ENST00000377107 ZNF879B4DU55 563 aa11.84□□□□□ -0.51
USP11-204ENST00000377107 TGFBR3LH3BV60 316 aa11.84□□□□□ -0.51
USP11-204ENST00000377107 ARPC1BO15143 372 aaKnown RBP11.84□□□□□ -0.51
USP11-204ENST00000377107 OIP5O43482 229 aa11.84□□□□□ -0.51
USP11-204ENST00000377107 OR6A2O95222 327 aa11.84□□□□□ -0.51
USP11-204ENST00000377107 HRGP04196 525 aa11.84□□□□□ -0.51
USP11-204ENST00000377107 MYF5P13349 255 aa11.84□□□□□ -0.51
USP11-204ENST00000377107 SRMP19623 302 aa11.84□□□□□ -0.51
USP11-204ENST00000377107 DEFB133Q30KQ1 61 aa11.84□□□□□ -0.51
USP11-204ENST00000377107 TMEM69Q5SWH9 247 aa11.84□□□□□ -0.51
USP11-204ENST00000377107 YOD1Q5VVQ6 348 aaPredicted RBP11.84□□□□□ -0.51
USP11-204ENST00000377107 NPSR1Q6W5P4 371 aa11.84□□□□□ -0.51
USP11-204ENST00000377107 OR52I2Q8NH67 350 aa11.84□□□□□ -0.51
USP11-204ENST00000377107 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.84□□□□□ -0.51
USP11-204ENST00000377107 NSMAFQ92636 917 aa11.84□□□□□ -0.51
USP11-204ENST00000377107 KLHDC7BQ96G42 594 aa11.84□□□□□ -0.51
USP11-204ENST00000377107 PGLYRP3Q96LB9 341 aa11.84□□□□□ -0.51
USP11-204ENST00000377107 SEC22CQ9BRL7 303 aa11.84□□□□□ -0.51
USP11-204ENST00000377107 METTL17Q9H7H0 456 aaPredicted RBP11.84□□□□□ -0.51
USP11-204ENST00000377107 LIN7BQ9HAP6 207 aa11.84□□□□□ -0.51
USP11-204ENST00000377107 GRHPRQ9UBQ7 328 aa11.84□□□□□ -0.51
USP11-204ENST00000377107 LAMP5Q9UJQ1 280 aa11.84□□□□□ -0.51
USP11-204ENST00000377107 C2orf72A6NCS6 295 aa11.83□□□□□ -0.51
USP11-204ENST00000377107 SERINC4A6NH21 518 aa11.83□□□□□ -0.51
USP11-204ENST00000377107 SCDO00767 359 aa11.83□□□□□ -0.51
USP11-204ENST00000377107 SCO2O43819 266 aa11.83□□□□□ -0.51
USP11-204ENST00000377107 CDC40O60508 579 aaKnown RBP eCLIP11.83□□□□□ -0.51
USP11-204ENST00000377107 PTP4A3O75365 173 aa11.83□□□□□ -0.51
USP11-204ENST00000377107 AK1P00568 194 aa11.83□□□□□ -0.51
USP11-204ENST00000377107 TRAPPC2P0DI81 140 aa11.83□□□□□ -0.51
USP11-204ENST00000377107 TRAPPC2BP0DI82 140 aa11.83□□□□□ -0.51
USP11-204ENST00000377107 GPR143P51810 404 aa11.83□□□□□ -0.51
USP11-204ENST00000377107 MGAT2Q10469 447 aa11.83□□□□□ -0.51
USP11-204ENST00000377107 ALG10Q5BKT4 473 aa11.83□□□□□ -0.51
USP11-204ENST00000377107 LRRC69Q6ZNQ3 347 aa11.83□□□□□ -0.51
USP11-204ENST00000377107 ZNF687Q8N1G0 1237 aa11.83□□□□□ -0.51
USP11-204ENST00000377107 MEIOBQ8N635 442 aa11.83□□□□□ -0.51
USP11-204ENST00000377107 BCORP1Q8N888 145 aa11.83□□□□□ -0.51
USP11-204ENST00000377107 C19orf47Q8N9M1 422 aaKnown RBP11.83□□□□□ -0.51
USP11-204ENST00000377107 OR11H7Q8NGC8 314 aa11.83□□□□□ -0.51
USP11-204ENST00000377107 SYNPRQ8TBG9 265 aa11.83□□□□□ -0.51
USP11-204ENST00000377107 OMA1Q96E52 524 aa11.83□□□□□ -0.51
USP11-204ENST00000377107 HYLS1Q96M11 299 aa11.83□□□□□ -0.51
USP11-204ENST00000377107 SLITRK2Q9H156 845 aa11.83□□□□□ -0.51
USP11-204ENST00000377107 CLEC4MQ9H2X3 399 aaPredicted RBP11.83□□□□□ -0.51
USP11-204ENST00000377107 A0A087WV62 115 aa11.83□□□□□ -0.52
USP11-204ENST00000377107 GMDSO60547 372 aa11.83□□□□□ -0.52
USP11-204ENST00000377107 NKX2-2O95096 273 aa11.83□□□□□ -0.52
USP11-204ENST00000377107 OR2T7P0C7T2 308 aa11.83□□□□□ -0.52
USP11-204ENST00000377107 THBS2P35442 1172 aa11.83□□□□□ -0.52
USP11-204ENST00000377107 PITPNAQ00169 270 aa11.83□□□□□ -0.52
USP11-204ENST00000377107 HLA-DQA1Q5Y7H0 255 aa11.83□□□□□ -0.52
USP11-204ENST00000377107 APOOLQ6UXV4 268 aa11.83□□□□□ -0.52
USP11-204ENST00000377107 ELMOD2Q8IZ81 293 aa11.83□□□□□ -0.52
USP11-204ENST00000377107 OR2T27Q8NH04 317 aa11.83□□□□□ -0.52
USP11-204ENST00000377107 NKD1Q969G9 470 aa11.83□□□□□ -0.52
USP11-204ENST00000377107 SMIM19Q96E16 107 aa11.83□□□□□ -0.52
USP11-204ENST00000377107 SYT4Q9H2B2 425 aa11.83□□□□□ -0.52
USP11-204ENST00000377107 ATXN7L1Q9ULK2 861 aaPredicted RBP11.83□□□□□ -0.52
USP11-204ENST00000377107 SATB2Q9UPW6 733 aa11.83□□□□□ -0.52
USP11-204ENST00000377107 ALX3O95076 343 aa11.83□□□□□ -0.52
USP11-204ENST00000377107 ZFPL1O95159 310 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms