RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 ARHGEF39Q8N4T4 335 aa23.14■■□□□ 1.3
C9orf40-201ENST00000376854 MRPL15Q9P015 296 aaKnown RBP23.14■■□□□ 1.3
C9orf40-201ENST00000376854 ELF5Q9UKW6 265 aaPredicted RBP23.14■■□□□ 1.3
C9orf40-201ENST00000376854 PIAS3Q9Y6X2 628 aa23.14■■□□□ 1.3
C9orf40-201ENST00000376854 KIR2DS5A0A0G2JLQ3 304 aa23.14■■□□□ 1.29
C9orf40-201ENST00000376854 A0A0G2JNG1 304 aa23.14■■□□□ 1.29
C9orf40-201ENST00000376854 A0A1B0GVT2 93 aa23.14■■□□□ 1.29
C9orf40-201ENST00000376854 OR5K3A6NET4 321 aa23.14■■□□□ 1.29
C9orf40-201ENST00000376854 SERINC4A6NH21 518 aa23.14■■□□□ 1.29
C9orf40-201ENST00000376854 IFITM5A6NNB3 132 aa23.14■■□□□ 1.29
C9orf40-201ENST00000376854 KIR2DS3K7RE56 304 aa23.14■■□□□ 1.29
C9orf40-201ENST00000376854 PDCD5O14737 125 aa23.14■■□□□ 1.29
C9orf40-201ENST00000376854 FOXS1O43638 330 aa23.14■■□□□ 1.29
C9orf40-201ENST00000376854 SSNA1O43805 119 aa23.14■■□□□ 1.29
C9orf40-201ENST00000376854 SULT1A3P0DMM9 295 aa23.14■■□□□ 1.29
C9orf40-201ENST00000376854 SULT1A4P0DMN0 295 aa23.14■■□□□ 1.29
C9orf40-201ENST00000376854 HSF2Q03933 536 aa23.14■■□□□ 1.29
C9orf40-201ENST00000376854 KIR2DS5Q14953 304 aa23.14■■□□□ 1.29
C9orf40-201ENST00000376854 FAM199XQ6PEV8 388 aaPredicted RBP23.14■■□□□ 1.29
C9orf40-201ENST00000376854 TEX261Q6UWH6 196 aa23.14■■□□□ 1.29
C9orf40-201ENST00000376854 FGD2Q7Z6J4 655 aa23.14■■□□□ 1.29
C9orf40-201ENST00000376854 ZNF433Q8N7K0 673 aaPredicted RBP23.14■■□□□ 1.29
C9orf40-201ENST00000376854 ZNF527Q8NB42 609 aa23.14■■□□□ 1.29
C9orf40-201ENST00000376854 C20orf85Q9H1P6 137 aa23.14■■□□□ 1.29
C9orf40-201ENST00000376854 BEX1Q9HBH7 125 aa23.14■■□□□ 1.29
C9orf40-201ENST00000376854 ANKRD10Q9NXR5 420 aa23.14■■□□□ 1.29
C9orf40-201ENST00000376854 WSB2Q9NYS7 404 aaPredicted RBP23.14■■□□□ 1.29
C9orf40-201ENST00000376854 TMA7Q9Y2S6 64 aaKnown RBP23.14■■□□□ 1.29
C9orf40-201ENST00000376854 ZNF281Q9Y2X9 895 aa23.14■■□□□ 1.29
C9orf40-201ENST00000376854 OR10H1Q9Y4A9 318 aa23.14■■□□□ 1.29
C9orf40-201ENST00000376854 U3KQ87 197 aa23.14■■□□□ 1.29
C9orf40-201ENST00000376854 KNL1Q8NG31 2342 aa23.14■■□□□ 1.29
C9orf40-201ENST00000376854 MEIKINA0A087WXM9 373 aa23.13■■□□□ 1.29
C9orf40-201ENST00000376854 FAM171A2A8MVW0 826 aa23.13■■□□□ 1.29
C9orf40-201ENST00000376854 SLC22A18ASQ8N1D0 253 aa23.13■■□□□ 1.29
C9orf40-201ENST00000376854 C3orf49Q96BT1 292 aa23.13■■□□□ 1.29
C9orf40-201ENST00000376854 SEMA6CQ9H3T2 930 aa23.13■■□□□ 1.29
C9orf40-201ENST00000376854 NKIRAS2Q9NYR9 191 aa23.13■■□□□ 1.29
C9orf40-201ENST00000376854 A0A1B0GVI7 797 aa23.13■■□□□ 1.29
C9orf40-201ENST00000376854 AIPO00170 330 aa23.13■■□□□ 1.29
C9orf40-201ENST00000376854 ZNF749O43361 778 aa23.13■■□□□ 1.29
C9orf40-201ENST00000376854 PRAMEF2O60811 474 aa23.13■■□□□ 1.29
C9orf40-201ENST00000376854 TPOP07202 933 aa23.13■■□□□ 1.29
C9orf40-201ENST00000376854 CT45A8P0DMV1 189 aa23.13■■□□□ 1.29
C9orf40-201ENST00000376854 CT45A9P0DMV2 189 aa23.13■■□□□ 1.29
C9orf40-201ENST00000376854 RNH1P13489 461 aaKnown RBP23.13■■□□□ 1.29
C9orf40-201ENST00000376854 UQCRC1P31930 480 aa23.13■■□□□ 1.29
C9orf40-201ENST00000376854 MAGEB1P43366 347 aa23.13■■□□□ 1.29
C9orf40-201ENST00000376854 NANOS3P60323 173 aaKnown RBP23.13■■□□□ 1.29
C9orf40-201ENST00000376854 CT45A2Q5DJT8 189 aa23.13■■□□□ 1.29
C9orf40-201ENST00000376854 ARMC6Q6NXE6 501 aa23.13■■□□□ 1.29
C9orf40-201ENST00000376854 BCORP1Q8N888 145 aa23.13■■□□□ 1.29
C9orf40-201ENST00000376854 MOSPD2Q8NHP6 518 aa23.13■■□□□ 1.29
C9orf40-201ENST00000376854 ANGPTL6Q8NI99 470 aa23.13■■□□□ 1.29
C9orf40-201ENST00000376854 GCDHQ92947 438 aaPredicted RBP23.13■■□□□ 1.29
C9orf40-201ENST00000376854 HGDQ93099 445 aa23.13■■□□□ 1.29
C9orf40-201ENST00000376854 ZNF275Q9NSD4 429 aaPredicted RBP23.13■■□□□ 1.29
C9orf40-201ENST00000376854 RABL2AQ9UBK7 228 aaPredicted RBP23.13■■□□□ 1.29
C9orf40-201ENST00000376854 RABL2BQ9UNT1 228 aa23.13■■□□□ 1.29
C9orf40-201ENST00000376854 RCE1Q9Y256 329 aa23.13■■□□□ 1.29
C9orf40-201ENST00000376854 A0A1W2PQ72 361 aa23.12■■□□□ 1.29
C9orf40-201ENST00000376854 GLCEO94923 617 aa23.12■■□□□ 1.29
C9orf40-201ENST00000376854 RPS4XP62701 263 aaKnown RBP23.12■■□□□ 1.29
C9orf40-201ENST00000376854 ERV3-1Q14264 604 aa23.12■■□□□ 1.29
C9orf40-201ENST00000376854 RPS4Y2Q8TD47 263 aa23.12■■□□□ 1.29
C9orf40-201ENST00000376854 DGAT2Q96PD7 388 aa23.12■■□□□ 1.29
C9orf40-201ENST00000376854 SPRTNQ9H040 489 aaPredicted RBP23.12■■□□□ 1.29
C9orf40-201ENST00000376854 RNF215Q9Y6U7 377 aa23.12■■□□□ 1.29
C9orf40-201ENST00000376854 TCRBV21S2A2A0A5A6 115 aa23.11■■□□□ 1.29
C9orf40-201ENST00000376854 OR2W5A6NFC9 320 aa23.11■■□□□ 1.29
C9orf40-201ENST00000376854 CTNSO60931 367 aa23.11■■□□□ 1.29
C9orf40-201ENST00000376854 ZFPL1O95159 310 aa23.11■■□□□ 1.29
C9orf40-201ENST00000376854 RAF1P04049 648 aa23.11■■□□□ 1.29
C9orf40-201ENST00000376854 POU3F3P20264 500 aaPredicted RBP23.11■■□□□ 1.29
C9orf40-201ENST00000376854 PGDP52209 483 aa23.11■■□□□ 1.29
C9orf40-201ENST00000376854 PRPS1P60891 318 aa23.11■■□□□ 1.29
C9orf40-201ENST00000376854 ISXQ2M1V0 245 aa23.11■■□□□ 1.29
C9orf40-201ENST00000376854 SFRP4Q6FHJ7 346 aaPredicted RBP23.11■■□□□ 1.29
C9orf40-201ENST00000376854 LEG1Q6P5S2 330 aa23.11■■□□□ 1.29
C9orf40-201ENST00000376854 FCRLAQ7L513 359 aa23.11■■□□□ 1.29
C9orf40-201ENST00000376854 TAF8Q7Z7C8 310 aa23.11■■□□□ 1.29
C9orf40-201ENST00000376854 SLC35F3Q8IY50 421 aa23.11■■□□□ 1.29
C9orf40-201ENST00000376854 AVL9Q8NBF6 648 aa23.11■■□□□ 1.29
C9orf40-201ENST00000376854 SLC25A38Q96DW6 304 aa23.11■■□□□ 1.29
C9orf40-201ENST00000376854 COL4A2P08572 1712 aa23.11■■□□□ 1.29
C9orf40-201ENST00000376854 OR5K4A6NMS3 321 aa23.11■■□□□ 1.29
C9orf40-201ENST00000376854 LEUTXA8MZ59 168 aa23.11■■□□□ 1.29
C9orf40-201ENST00000376854 PRR32B1ATL7 298 aa23.11■■□□□ 1.29
C9orf40-201ENST00000376854 DPP4P27487 766 aa23.11■■□□□ 1.29
C9orf40-201ENST00000376854 MAT1AQ00266 395 aaKnown RBP23.11■■□□□ 1.29
C9orf40-201ENST00000376854 IL10RAQ13651 578 aa23.11■■□□□ 1.29
C9orf40-201ENST00000376854 ESCO2Q56NI9 601 aa23.11■■□□□ 1.29
C9orf40-201ENST00000376854 MCATQ8IVS2 390 aaKnown RBP23.11■■□□□ 1.29
C9orf40-201ENST00000376854 ZNF680Q8NEM1 530 aa23.11■■□□□ 1.29
C9orf40-201ENST00000376854 C16orf52Q8NHV5 167 aa23.11■■□□□ 1.29
C9orf40-201ENST00000376854 RGP1Q92546 391 aaPredicted RBP23.11■■□□□ 1.29
C9orf40-201ENST00000376854 GAS2L1Q99501 681 aaPredicted RBP23.11■■□□□ 1.29
C9orf40-201ENST00000376854 ALG12Q9BV10 488 aa23.11■■□□□ 1.29
C9orf40-201ENST00000376854 PLEKHA1Q9HB21 404 aa23.11■■□□□ 1.29
C9orf40-201ENST00000376854 AKAP7Q9P0M2 348 aaPredicted RBP23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms