RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 RAB21Q9UL25 225 aa12.91□□□□□ -0.34
HDAC6-204ENST00000376643 RCE1Q9Y256 329 aa12.91□□□□□ -0.34
HDAC6-204ENST00000376643 PLCE1Q9P212 2302 aa12.91□□□□□ -0.34
HDAC6-204ENST00000376643 SONP18583 2426 aaKnown RBP12.91□□□□□ -0.34
HDAC6-204ENST00000376643 ATRQ13535 2644 aa12.9□□□□□ -0.34
HDAC6-204ENST00000376643 ARPC4-TTLL3A0A0A6YYG9 625 aa12.9□□□□□ -0.34
HDAC6-204ENST00000376643 TMEM120BA0PK00 339 aa12.9□□□□□ -0.34
HDAC6-204ENST00000376643 ZC3H12DA2A288 527 aaKnown RBP12.9□□□□□ -0.34
HDAC6-204ENST00000376643 FRS3O43559 492 aa12.9□□□□□ -0.34
HDAC6-204ENST00000376643 SNNO75324 88 aaPredicted RBP12.9□□□□□ -0.34
HDAC6-204ENST00000376643 IL12AP29459 219 aa12.9□□□□□ -0.34
HDAC6-204ENST00000376643 STX1BP61266 288 aa12.9□□□□□ -0.34
HDAC6-204ENST00000376643 CCDC36Q8IYA8 594 aa12.9□□□□□ -0.34
HDAC6-204ENST00000376643 MIER2Q8N344 545 aa12.9□□□□□ -0.34
HDAC6-204ENST00000376643 ZNF525Q8N782 197 aa12.9□□□□□ -0.34
HDAC6-204ENST00000376643 OR4F15Q8NGB8 312 aa12.9□□□□□ -0.34
HDAC6-204ENST00000376643 BBS10Q8TAM1 723 aa12.9□□□□□ -0.34
HDAC6-204ENST00000376643 C10orf105Q8TEF2 133 aa12.9□□□□□ -0.34
HDAC6-204ENST00000376643 SLC38A5Q8WUX1 472 aa12.9□□□□□ -0.34
HDAC6-204ENST00000376643 AURKBQ96GD4 344 aaPredicted RBP12.9□□□□□ -0.34
HDAC6-204ENST00000376643 MAELQ96JY0 434 aaKnown RBP12.9□□□□□ -0.34
HDAC6-204ENST00000376643 KCNK17Q96T54 332 aa12.9□□□□□ -0.34
HDAC6-204ENST00000376643 C1QTNF6Q9BXI9 259 aa12.9□□□□□ -0.34
HDAC6-204ENST00000376643 BEX2Q9BXY8 128 aa12.9□□□□□ -0.34
HDAC6-204ENST00000376643 LINC00470Q9BZP3 86 aa12.9□□□□□ -0.34
HDAC6-204ENST00000376643 WDR55Q9H6Y2 383 aaPredicted RBP12.9□□□□□ -0.34
HDAC6-204ENST00000376643 C12orf10Q9HB07 376 aa12.9□□□□□ -0.34
HDAC6-204ENST00000376643 RLIMQ9NVW2 624 aa12.9□□□□□ -0.34
HDAC6-204ENST00000376643 B9A039 149 aa12.89□□□□□ -0.35
HDAC6-204ENST00000376643 C5orf58C9J3I9 102 aa12.89□□□□□ -0.35
HDAC6-204ENST00000376643 ATP6V1G2-DDX39BF2Z307 99 aa12.89□□□□□ -0.35
HDAC6-204ENST00000376643 UBDO15205 165 aa12.89□□□□□ -0.35
HDAC6-204ENST00000376643 GKN3PP0CG01 181 aa12.89□□□□□ -0.35
HDAC6-204ENST00000376643 KITP10721 976 aa12.89□□□□□ -0.35
HDAC6-204ENST00000376643 ETFAP13804 333 aa12.89□□□□□ -0.35
HDAC6-204ENST00000376643 ZNF43P17038 809 aa12.89□□□□□ -0.35
HDAC6-204ENST00000376643 CDH2P19022 906 aaPredicted RBP12.89□□□□□ -0.35
HDAC6-204ENST00000376643 HNF1AP20823 631 aa12.89□□□□□ -0.35
HDAC6-204ENST00000376643 PTNP21246 168 aa12.89□□□□□ -0.35
HDAC6-204ENST00000376643 PPIBP23284 216 aaKnown RBP12.89□□□□□ -0.35
HDAC6-204ENST00000376643 THBS2P35442 1172 aa12.89□□□□□ -0.35
HDAC6-204ENST00000376643 ACAA2P42765 397 aaKnown RBP12.89□□□□□ -0.35
HDAC6-204ENST00000376643 LSM11P83369 360 aaKnown RBP eCLIP12.89□□□□□ -0.35
HDAC6-204ENST00000376643 MFSD13AQ14CX5 517 aa12.89□□□□□ -0.35
HDAC6-204ENST00000376643 TBRG1Q3YBR2 411 aa12.89□□□□□ -0.35
HDAC6-204ENST00000376643 ZNF311Q5JNZ3 666 aa12.89□□□□□ -0.35
HDAC6-204ENST00000376643 NIPAL3Q6P499 406 aa12.89□□□□□ -0.35
HDAC6-204ENST00000376643 ANKRD16Q6P6B7 361 aa12.89□□□□□ -0.35
HDAC6-204ENST00000376643 CREB3L2Q70SY1 520 aa12.89□□□□□ -0.35
HDAC6-204ENST00000376643 NET1Q7Z628 596 aaPredicted RBP12.89□□□□□ -0.35
HDAC6-204ENST00000376643 VRK2Q86Y07 508 aa12.89□□□□□ -0.35
HDAC6-204ENST00000376643 OR1K1Q8NGR3 316 aa12.89□□□□□ -0.35
HDAC6-204ENST00000376643 TMEM19Q96HH6 336 aa12.89□□□□□ -0.35
HDAC6-204ENST00000376643 ZNF385AQ96PM9 386 aaKnown RBP12.89□□□□□ -0.35
HDAC6-204ENST00000376643 SPATA5L1Q9BVQ7 753 aa12.89□□□□□ -0.35
HDAC6-204ENST00000376643 SHARPINQ9H0F6 387 aa12.89□□□□□ -0.35
HDAC6-204ENST00000376643 MANSC1Q9H8J5 431 aa12.89□□□□□ -0.35
HDAC6-204ENST00000376643 EVA1AQ9H8M9 152 aa12.89□□□□□ -0.35
HDAC6-204ENST00000376643 BCL2L10Q9HD36 194 aa12.89□□□□□ -0.35
HDAC6-204ENST00000376643 SELENONQ9NZV5 590 aa12.89□□□□□ -0.35
HDAC6-204ENST00000376643 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.89□□□□□ -0.35
HDAC6-204ENST00000376643 MOKQ9UQ07 419 aa12.89□□□□□ -0.35
HDAC6-204ENST00000376643 V9GYY5 206 aaPredicted RBP12.89□□□□□ -0.35
HDAC6-204ENST00000376643 A0A096LNT2 108 aa12.88□□□□□ -0.35
HDAC6-204ENST00000376643 LOC390937A0A1W2PQ73 354 aa12.88□□□□□ -0.35
HDAC6-204ENST00000376643 SLC43A1O75387 559 aa12.88□□□□□ -0.35
HDAC6-204ENST00000376643 VIMP08670 466 aaKnown RBP12.88□□□□□ -0.35
HDAC6-204ENST00000376643 PNMTP11086 282 aa12.88□□□□□ -0.35
HDAC6-204ENST00000376643 ETS2P15036 469 aa12.88□□□□□ -0.35
HDAC6-204ENST00000376643 SERPINF1P36955 418 aa12.88□□□□□ -0.35
HDAC6-204ENST00000376643 POLR2JP52435 117 aaKnown RBP12.88□□□□□ -0.35
HDAC6-204ENST00000376643 FOXG1P55316 489 aaPredicted RBP12.88□□□□□ -0.35
HDAC6-204ENST00000376643 C1DQ13901 141 aaKnown RBP12.88□□□□□ -0.35
HDAC6-204ENST00000376643 MPP2Q14168 576 aa12.88□□□□□ -0.35
HDAC6-204ENST00000376643 SLC46A3Q7Z3Q1 461 aa12.88□□□□□ -0.35
HDAC6-204ENST00000376643 SNX32Q86XE0 403 aa12.88□□□□□ -0.35
HDAC6-204ENST00000376643 KRT73Q86Y46 540 aa12.88□□□□□ -0.35
HDAC6-204ENST00000376643 GOLGA6L1Q8N7Z2 621 aa12.88□□□□□ -0.35
HDAC6-204ENST00000376643 ZIC4Q8N9L1 334 aa12.88□□□□□ -0.35
HDAC6-204ENST00000376643 BHLHE22Q8NFJ8 381 aaPredicted RBP12.88□□□□□ -0.35
HDAC6-204ENST00000376643 IL17RDQ8NFM7 739 aa12.88□□□□□ -0.35
HDAC6-204ENST00000376643 DNAJA4Q8WW22 397 aaPredicted RBP12.88□□□□□ -0.35
HDAC6-204ENST00000376643 SLC38A4Q969I6 547 aa12.88□□□□□ -0.35
HDAC6-204ENST00000376643 C3orf49Q96BT1 292 aa12.88□□□□□ -0.35
HDAC6-204ENST00000376643 FBXO17Q96EF6 278 aa12.88□□□□□ -0.35
HDAC6-204ENST00000376643 ALKBH3Q96Q83 286 aaPredicted RBP12.88□□□□□ -0.35
HDAC6-204ENST00000376643 RAB1BQ9H0U4 201 aa12.88□□□□□ -0.35
HDAC6-204ENST00000376643 A4GALTQ9NPC4 353 aa12.88□□□□□ -0.35
HDAC6-204ENST00000376643 CA10Q9NS85 328 aa12.88□□□□□ -0.35
HDAC6-204ENST00000376643 KCNS2Q9ULS6 477 aa12.88□□□□□ -0.35
HDAC6-204ENST00000376643 CORO2BQ9UQ03 480 aa12.88□□□□□ -0.35
HDAC6-204ENST00000376643 CR1P17927 2039 aa12.88□□□□□ -0.35
HDAC6-204ENST00000376643 DNHD1Q96M86 4753 aa12.88□□□□□ -0.35
HDAC6-204ENST00000376643 COL6A5A8TX70 2615 aa12.87□□□□□ -0.35
HDAC6-204ENST00000376643 TMEM229AB2RXF0 380 aa12.87□□□□□ -0.35
HDAC6-204ENST00000376643 AIM2O14862 343 aa12.87□□□□□ -0.35
HDAC6-204ENST00000376643 KLF11O14901 512 aa12.87□□□□□ -0.35
HDAC6-204ENST00000376643 NPIPB7O75200 414 aa12.87□□□□□ -0.35
HDAC6-204ENST00000376643 ERLIN1O75477 346 aa12.87□□□□□ -0.35
HDAC6-204ENST00000376643 PRKAR1BP31321 381 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms