RNA–Protein interactions for RNA: ENST00000376636.7

VPS13A-205, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 11,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-205ENST00000376636 APOBEC3BQ9UH17 382 aaKnown RBP10.88□□□□□ -0.67
VPS13A-205ENST00000376636 GPRIN2O60269 458 aa10.88□□□□□ -0.67
VPS13A-205ENST00000376636 IL4RP24394 825 aa10.88□□□□□ -0.67
VPS13A-205ENST00000376636 GPLD1P80108 840 aa10.88□□□□□ -0.67
VPS13A-205ENST00000376636 MSS51Q4VC12 460 aa10.88□□□□□ -0.67
VPS13A-205ENST00000376636 FAM182AQ5T1J6 154 aa10.88□□□□□ -0.67
VPS13A-205ENST00000376636 GRINAQ7Z429 371 aa10.88□□□□□ -0.67
VPS13A-205ENST00000376636 C4orf32Q8N8J7 132 aa10.88□□□□□ -0.67
VPS13A-205ENST00000376636 TAAR5O14804 337 aa10.88□□□□□ -0.67
VPS13A-205ENST00000376636 XCR1P46094 333 aa10.88□□□□□ -0.67
VPS13A-205ENST00000376636 DNAJC5GQ8N7S2 189 aa10.88□□□□□ -0.67
VPS13A-205ENST00000376636 NETO1Q8TDF5 533 aa10.88□□□□□ -0.67
VPS13A-205ENST00000376636 IER3IP1Q9Y5U9 82 aa10.88□□□□□ -0.67
VPS13A-205ENST00000376636 CLDN24A6NM45 220 aa10.88□□□□□ -0.67
VPS13A-205ENST00000376636 RAB1AP62820 205 aa10.88□□□□□ -0.67
VPS13A-205ENST00000376636 VASNQ6EMK4 673 aa10.88□□□□□ -0.67
VPS13A-205ENST00000376636 NPSR1Q6W5P4 371 aa10.88□□□□□ -0.67
VPS13A-205ENST00000376636 SCARB1Q8WTV0 552 aa10.88□□□□□ -0.67
VPS13A-205ENST00000376636 PIGCQ92535 297 aa10.88□□□□□ -0.67
VPS13A-205ENST00000376636 PLK3Q9H4B4 646 aa10.88□□□□□ -0.67
VPS13A-205ENST00000376636 TMEM72A0PK05 275 aa10.88□□□□□ -0.67
VPS13A-205ENST00000376636 H2AFB1P0C5Y9 115 aa10.88□□□□□ -0.67
VPS13A-205ENST00000376636 FGFBP2Q9BYJ0 223 aa10.88□□□□□ -0.67
VPS13A-205ENST00000376636 PELI2Q9HAT8 420 aa10.88□□□□□ -0.67
VPS13A-205ENST00000376636 A0A0D9SEW6 157 aa10.88□□□□□ -0.67
VPS13A-205ENST00000376636 LOC102723971A0A1B0GUV8 181 aa10.88□□□□□ -0.67
VPS13A-205ENST00000376636 UMAD1C9J7I0 102 aa10.88□□□□□ -0.67
VPS13A-205ENST00000376636 OR7C1O76099 320 aaPredicted RBP10.88□□□□□ -0.67
VPS13A-205ENST00000376636 TACR1P25103 407 aa10.88□□□□□ -0.67
VPS13A-205ENST00000376636 GABRB3P28472 473 aa10.88□□□□□ -0.67
VPS13A-205ENST00000376636 MTCP1P56278 107 aa10.88□□□□□ -0.67
VPS13A-205ENST00000376636 PPP2CAP67775 309 aa10.88□□□□□ -0.67
VPS13A-205ENST00000376636 PDZK1IP1Q13113 114 aa10.88□□□□□ -0.67
VPS13A-205ENST00000376636 C18orf63Q68DL7 685 aa10.88□□□□□ -0.67
VPS13A-205ENST00000376636 CDHR3Q6ZTQ4 885 aa10.88□□□□□ -0.67
VPS13A-205ENST00000376636 GGHQ92820 318 aa10.88□□□□□ -0.67
VPS13A-205ENST00000376636 IMP4Q96G21 291 aaKnown RBP10.88□□□□□ -0.67
VPS13A-205ENST00000376636 SLC6A18Q96N87 628 aa10.88□□□□□ -0.67
VPS13A-205ENST00000376636 PKMYT1Q99640 499 aa10.88□□□□□ -0.67
VPS13A-205ENST00000376636 PCED1AQ9H1Q7 454 aa10.88□□□□□ -0.67
VPS13A-205ENST00000376636 OR51B6Q9H340 312 aa10.88□□□□□ -0.67
VPS13A-205ENST00000376636 USP36Q9P275 1121 aaKnown RBP10.88□□□□□ -0.67
VPS13A-205ENST00000376636 MYOCOSA0A1B0GUC4 107 aa10.88□□□□□ -0.67
VPS13A-205ENST00000376636 C4orf47A7E2U8 309 aa10.88□□□□□ -0.67
VPS13A-205ENST00000376636 NTF3P20783 257 aa10.88□□□□□ -0.67
VPS13A-205ENST00000376636 HTR2CP28335 458 aa10.88□□□□□ -0.67
VPS13A-205ENST00000376636 RPE65Q16518 533 aa10.88□□□□□ -0.67
VPS13A-205ENST00000376636 CREBZFQ9NS37 354 aa10.88□□□□□ -0.67
VPS13A-205ENST00000376636 SALL3Q9BXA9 1300 aa10.87□□□□□ -0.67
VPS13A-205ENST00000376636 ADAM11O75078 769 aa10.87□□□□□ -0.67
VPS13A-205ENST00000376636 DGKZQ13574 1117 aa10.87□□□□□ -0.67
VPS13A-205ENST00000376636 IQCJQ1A5X6 159 aa10.87□□□□□ -0.67
VPS13A-205ENST00000376636 SLC35D2Q76EJ3 337 aa10.87□□□□□ -0.67
VPS13A-205ENST00000376636 OVCH1Q7RTY7 1134 aa10.87□□□□□ -0.67
VPS13A-205ENST00000376636 CISD2Q8N5K1 135 aaKnown RBP10.87□□□□□ -0.67
VPS13A-205ENST00000376636 NKX6-3A6NJ46 265 aa10.87□□□□□ -0.67
VPS13A-205ENST00000376636 PHF1O43189 567 aaPredicted RBP10.87□□□□□ -0.67
VPS13A-205ENST00000376636 NME2P22392 152 aa10.87□□□□□ -0.67
VPS13A-205ENST00000376636 HLA-FP30511 346 aa10.87□□□□□ -0.67
VPS13A-205ENST00000376636 PDE7AQ13946 482 aa10.87□□□□□ -0.67
VPS13A-205ENST00000376636 CHADLQ6NUI6 762 aa10.87□□□□□ -0.67
VPS13A-205ENST00000376636 STEAP1BQ6NZ63 245 aa10.87□□□□□ -0.67
VPS13A-205ENST00000376636 DUSP19Q8WTR2 217 aa10.87□□□□□ -0.67
VPS13A-205ENST00000376636 TECTBQ96PL2 329 aa10.87□□□□□ -0.67
VPS13A-205ENST00000376636 TUBAL3A6NHL2 446 aa10.87□□□□□ -0.67
VPS13A-205ENST00000376636 ADGRB2O60241 1585 aa10.87□□□□□ -0.67
VPS13A-205ENST00000376636 RING1Q06587 406 aa10.87□□□□□ -0.67
VPS13A-205ENST00000376636 DOC2AQ14183 400 aa10.87□□□□□ -0.67
VPS13A-205ENST00000376636 ADGRF3Q8IZF5 1079 aa10.87□□□□□ -0.67
VPS13A-205ENST00000376636 OR10J5Q8NHC4 309 aa10.87□□□□□ -0.67
VPS13A-205ENST00000376636 FOXJ1Q92949 421 aa10.87□□□□□ -0.67
VPS13A-205ENST00000376636 NSUN5Q96P11 429 aaKnown RBP10.87□□□□□ -0.67
VPS13A-205ENST00000376636 OR8B8Q15620 311 aa10.87□□□□□ -0.67
VPS13A-205ENST00000376636 ADGRG5Q8IZF4 528 aa10.87□□□□□ -0.67
VPS13A-205ENST00000376636 F2RL3Q96RI0 385 aa10.87□□□□□ -0.67
VPS13A-205ENST00000376636 BOCQ9BWV1 1114 aa10.87□□□□□ -0.67
VPS13A-205ENST00000376636 S1PR4O95977 384 aa10.87□□□□□ -0.67
VPS13A-205ENST00000376636 PDGFBP01127 241 aaPredicted RBP10.87□□□□□ -0.67
VPS13A-205ENST00000376636 HHEXQ03014 270 aa10.87□□□□□ -0.67
VPS13A-205ENST00000376636 ZNF765Q7L2R6 523 aa10.87□□□□□ -0.67
VPS13A-205ENST00000376636 CYB561A3Q8NBI2 242 aa10.87□□□□□ -0.67
VPS13A-205ENST00000376636 NLGN4YQ8NFZ3 816 aaPredicted RBP10.87□□□□□ -0.67
VPS13A-205ENST00000376636 TSLPQ969D9 159 aa10.87□□□□□ -0.67
VPS13A-205ENST00000376636 ARHGDIGQ99819 225 aa10.87□□□□□ -0.67
VPS13A-205ENST00000376636 APOBEC3GQ9HC16 384 aaKnown RBP10.87□□□□□ -0.67
VPS13A-205ENST00000376636 SERTM2A0A1B0GWG4 89 aa10.87□□□□□ -0.67
VPS13A-205ENST00000376636 RNF225M0QZC1 329 aaPredicted RBP10.87□□□□□ -0.67
VPS13A-205ENST00000376636 AP1G1O43747 822 aa10.87□□□□□ -0.67
VPS13A-205ENST00000376636 TIMM8AO60220 97 aaPredicted RBP10.87□□□□□ -0.67
VPS13A-205ENST00000376636 VNN1O95497 513 aa10.87□□□□□ -0.67
VPS13A-205ENST00000376636 ELNP15502 786 aa10.87□□□□□ -0.67
VPS13A-205ENST00000376636 RAB33AQ14088 237 aa10.87□□□□□ -0.67
VPS13A-205ENST00000376636 PIP5KL1Q5T9C9 394 aa10.87□□□□□ -0.67
VPS13A-205ENST00000376636 FBXO45P0C2W1 286 aa10.87□□□□□ -0.67
VPS13A-205ENST00000376636 FUT1P19526 365 aa10.87□□□□□ -0.67
VPS13A-205ENST00000376636 RFX2P48378 723 aa10.87□□□□□ -0.67
VPS13A-205ENST00000376636 PLAC9Q5JTB6 97 aa10.87□□□□□ -0.67
VPS13A-205ENST00000376636 C5orf46Q6UWT4 87 aa10.87□□□□□ -0.67
VPS13A-205ENST00000376636 H2BFWTQ7Z2G1 175 aa10.87□□□□□ -0.67
VPS13A-205ENST00000376636 SMOQ99835 787 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms