RNA–Protein interactions for RNA: ENST00000376610.6

HDAC6-202, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 736 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-202ENST00000376610 MPP2Q14168 576 aa16.14■□□□□ 0.17
HDAC6-202ENST00000376610 C1orf140Q5VVS0 124 aa16.14■□□□□ 0.17
HDAC6-202ENST00000376610 SLC46A3Q7Z3Q1 461 aa16.14■□□□□ 0.17
HDAC6-202ENST00000376610 PHC2Q8IXK0 858 aa16.14■□□□□ 0.17
HDAC6-202ENST00000376610 BOD1Q96IK1 185 aa16.14■□□□□ 0.17
HDAC6-202ENST00000376610 ZNF317Q96PQ6 595 aaPredicted RBP16.14■□□□□ 0.17
HDAC6-202ENST00000376610 SLC38A2Q96QD8 506 aa16.14■□□□□ 0.17
HDAC6-202ENST00000376610 RASD1Q9Y272 281 aa16.14■□□□□ 0.17
HDAC6-202ENST00000376610 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.14■□□□□ 0.179e-8■■■□□ 18
HDAC6-202ENST00000376610 DSPPQ9NZW4 1301 aa16.14■□□□□ 0.17
HDAC6-202ENST00000376610 PHF1O43189 567 aaPredicted RBP16.13■□□□□ 0.17
HDAC6-202ENST00000376610 FRS3O43559 492 aa16.13■□□□□ 0.17
HDAC6-202ENST00000376610 AHSA1O95433 338 aa16.13■□□□□ 0.17
HDAC6-202ENST00000376610 TFPTP0C1Z6 253 aa16.13■□□□□ 0.17
HDAC6-202ENST00000376610 KITP10721 976 aa16.13■□□□□ 0.17
HDAC6-202ENST00000376610 ETFAP13804 333 aa16.13■□□□□ 0.17
HDAC6-202ENST00000376610 ZNF16P17020 682 aaPredicted RBP16.13■□□□□ 0.17
HDAC6-202ENST00000376610 ACAA2P42765 397 aaKnown RBP16.13■□□□□ 0.17
HDAC6-202ENST00000376610 CARTPTQ16568 116 aa16.13■□□□□ 0.17
HDAC6-202ENST00000376610 TBRG1Q3YBR2 411 aa16.13■□□□□ 0.17
HDAC6-202ENST00000376610 PDCD4Q53EL6 469 aaKnown RBP16.13■□□□□ 0.17
HDAC6-202ENST00000376610 ATG16L1Q676U5 607 aa16.13■□□□□ 0.17
HDAC6-202ENST00000376610 NIPAL3Q6P499 406 aa16.13■□□□□ 0.17
HDAC6-202ENST00000376610 OR1K1Q8NGR3 316 aa16.13■□□□□ 0.17
HDAC6-202ENST00000376610 SLC38A5Q8WUX1 472 aa16.13■□□□□ 0.17
HDAC6-202ENST00000376610 NANOS1Q8WY41 292 aaKnown RBP16.13■□□□□ 0.17
HDAC6-202ENST00000376610 ITCHQ96J02 903 aa16.13■□□□□ 0.17
HDAC6-202ENST00000376610 ALKBH3Q96Q83 286 aaPredicted RBP16.13■□□□□ 0.17
HDAC6-202ENST00000376610 VRK1Q99986 396 aaPredicted RBP16.13■□□□□ 0.17
HDAC6-202ENST00000376610 KATNB1Q9BVA0 655 aa16.13■□□□□ 0.17
HDAC6-202ENST00000376610 TPT1P8Q9HAU6 139 aa16.13■□□□□ 0.17
HDAC6-202ENST00000376610 MYOZ1Q9NP98 299 aaPredicted RBP16.13■□□□□ 0.17
HDAC6-202ENST00000376610 IFT52Q9Y366 437 aa16.13■□□□□ 0.17
HDAC6-202ENST00000376610 MALRD1Q5VYJ5 2156 aa16.12■□□□□ 0.17
HDAC6-202ENST00000376610 IGHV1-18A0A0C4DH31 117 aa16.12■□□□□ 0.17
HDAC6-202ENST00000376610 A0A0G2JPF8 293 aa16.12■□□□□ 0.17
HDAC6-202ENST00000376610 HNRNPCL2B2RXH8 293 aa16.12■□□□□ 0.17
HDAC6-202ENST00000376610 HNRNPCL3B7ZW38 293 aa16.12■□□□□ 0.17
HDAC6-202ENST00000376610 HNRNPCL1O60812 293 aaKnown RBP16.12■□□□□ 0.17
HDAC6-202ENST00000376610 LGI1O95970 557 aa16.12■□□□□ 0.17
HDAC6-202ENST00000376610 HNRNPCL4P0DMR1 293 aa16.12■□□□□ 0.17
HDAC6-202ENST00000376610 IGHV4-31P0DP07 118 aa16.12■□□□□ 0.17
HDAC6-202ENST00000376610 SERPINF1P36955 418 aa16.12■□□□□ 0.17
HDAC6-202ENST00000376610 SELENOPP49908 381 aa16.12■□□□□ 0.17
HDAC6-202ENST00000376610 SH3BGRP55822 239 aaPredicted RBP16.12■□□□□ 0.17
HDAC6-202ENST00000376610 GGTLC2Q14390 218 aa16.12■□□□□ 0.17
HDAC6-202ENST00000376610 SWI5Q1ZZU3 235 aa16.12■□□□□ 0.17
HDAC6-202ENST00000376610 C6orf10Q5SRN2 563 aa16.12■□□□□ 0.17
HDAC6-202ENST00000376610 MSANTD1Q6ZTZ1 278 aa16.12■□□□□ 0.17
HDAC6-202ENST00000376610 CREB3L2Q70SY1 520 aa16.12■□□□□ 0.17
HDAC6-202ENST00000376610 STK35Q8TDR2 534 aa16.12■□□□□ 0.17
HDAC6-202ENST00000376610 TMEM19Q96HH6 336 aa16.12■□□□□ 0.17
HDAC6-202ENST00000376610 SPATA9Q9BWV2 254 aa16.12■□□□□ 0.17
HDAC6-202ENST00000376610 PARD6BQ9BYG5 372 aa16.12■□□□□ 0.17
HDAC6-202ENST00000376610 CA10Q9NS85 328 aa16.12■□□□□ 0.17
HDAC6-202ENST00000376610 ZIM2Q9NZV7 527 aa16.12■□□□□ 0.17
HDAC6-202ENST00000376610 RPS6KB2Q9UBS0 482 aa16.12■□□□□ 0.17
HDAC6-202ENST00000376610 FBXO9Q9UK97 447 aaPredicted RBP16.12■□□□□ 0.17
HDAC6-202ENST00000376610 KCNS2Q9ULS6 477 aa16.12■□□□□ 0.17
HDAC6-202ENST00000376610 VSTM5A8MXK1 200 aa16.11■□□□□ 0.17
HDAC6-202ENST00000376610 B9A039 149 aa16.11■□□□□ 0.17
HDAC6-202ENST00000376610 LMX1BO60663 402 aa16.11■□□□□ 0.17
HDAC6-202ENST00000376610 LY6HO94772 140 aa16.11■□□□□ 0.17
HDAC6-202ENST00000376610 ZCCHC18P0CG32 403 aa16.11■□□□□ 0.17
HDAC6-202ENST00000376610 MVDP53602 400 aa16.11■□□□□ 0.17
HDAC6-202ENST00000376610 MAPK11Q15759 364 aa16.11■□□□□ 0.17
HDAC6-202ENST00000376610 TNFAIP8L3Q5GJ75 292 aa16.11■□□□□ 0.17
HDAC6-202ENST00000376610 ZNF311Q5JNZ3 666 aa16.11■□□□□ 0.17
HDAC6-202ENST00000376610 FAM166AQ6J272 317 aa16.11■□□□□ 0.17
HDAC6-202ENST00000376610 LSRQ86X29 649 aaPredicted RBP16.11■□□□□ 0.17
HDAC6-202ENST00000376610 MFSD8Q8NHS3 518 aa16.11■□□□□ 0.17
HDAC6-202ENST00000376610 C3orf49Q96BT1 292 aa16.11■□□□□ 0.17
HDAC6-202ENST00000376610 SLC25A36Q96CQ1 311 aa16.11■□□□□ 0.17
HDAC6-202ENST00000376610 RAD21L1Q9H4I0 556 aa16.11■□□□□ 0.17
HDAC6-202ENST00000376610 SLC6A13Q9NSD5 602 aa16.11■□□□□ 0.17
HDAC6-202ENST00000376610 ARPC4-TTLL3A0A0A6YYG9 625 aa16.1■□□□□ 0.17
HDAC6-202ENST00000376610 LOC390937A0A1W2PQ73 354 aa16.1■□□□□ 0.17
HDAC6-202ENST00000376610 SNNO75324 88 aaPredicted RBP16.1■□□□□ 0.17
HDAC6-202ENST00000376610 PDE5AO76074 875 aa16.1■□□□□ 0.17
HDAC6-202ENST00000376610 ERCC1P07992 297 aaPredicted RBP16.1■□□□□ 0.17
HDAC6-202ENST00000376610 PRG2P13727 222 aa16.1■□□□□ 0.17
HDAC6-202ENST00000376610 APEHP13798 732 aaKnown RBP16.1■□□□□ 0.17
HDAC6-202ENST00000376610 HOXB1P14653 301 aaPredicted RBP16.1■□□□□ 0.17
HDAC6-202ENST00000376610 ZNF43P17038 809 aa16.1■□□□□ 0.17
HDAC6-202ENST00000376610 HNF1AP20823 631 aa16.1■□□□□ 0.17
HDAC6-202ENST00000376610 P2RY4P51582 365 aa16.1■□□□□ 0.17
HDAC6-202ENST00000376610 MST1LQ2TV78 715 aa16.1■□□□□ 0.17
HDAC6-202ENST00000376610 IQCCQ4KMZ1 466 aa16.1■□□□□ 0.17
HDAC6-202ENST00000376610 RPS26P11Q5JNZ5 115 aaPredicted RBP16.1■□□□□ 0.17
HDAC6-202ENST00000376610 ANKRD16Q6P6B7 361 aa16.1■□□□□ 0.17
HDAC6-202ENST00000376610 SERPINA11Q86U17 422 aa16.1■□□□□ 0.17
HDAC6-202ENST00000376610 EPHX4Q8IUS5 362 aa16.1■□□□□ 0.17
HDAC6-202ENST00000376610 CLIP4Q8N3C7 705 aa16.1■□□□□ 0.17
HDAC6-202ENST00000376610 ZNF540Q8NDQ6 660 aa16.1■□□□□ 0.17
HDAC6-202ENST00000376610 OR4F15Q8NGB8 312 aa16.1■□□□□ 0.17
HDAC6-202ENST00000376610 MAGEE2Q8TD90 523 aaPredicted RBP16.1■□□□□ 0.17
HDAC6-202ENST00000376610 MGARPQ8TDB4 240 aa16.1■□□□□ 0.17
HDAC6-202ENST00000376610 BCL2L2Q92843 193 aaPredicted RBP16.1■□□□□ 0.17
HDAC6-202ENST00000376610 ZBTB9Q96C00 473 aa16.1■□□□□ 0.17
HDAC6-202ENST00000376610 SORCS2Q96PQ0 1159 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms