RNA–Protein interactions for RNA: ENST00000375850.3

C9orf47-202, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene C9orf47, Length 859 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-202ENST00000375850 TRPC5OSA6NMA1 111 aa20.21■□□□□ 0.83
C9orf47-202ENST00000375850 KLF11O14901 512 aa20.21■□□□□ 0.83
C9orf47-202ENST00000375850 FRS3O43559 492 aa20.21■□□□□ 0.83
C9orf47-202ENST00000375850 ERCC1P07992 297 aaPredicted RBP20.21■□□□□ 0.83
C9orf47-202ENST00000375850 BGNP21810 368 aa20.21■□□□□ 0.83
C9orf47-202ENST00000375850 ACAA2P42765 397 aaKnown RBP20.21■□□□□ 0.83
C9orf47-202ENST00000375850 CDKN2CP42773 168 aa20.21■□□□□ 0.83
C9orf47-202ENST00000375850 PPOXP50336 477 aa20.21■□□□□ 0.83
C9orf47-202ENST00000375850 COX20Q5RI15 118 aa20.21■□□□□ 0.83
C9orf47-202ENST00000375850 C1orf140Q5VVS0 124 aa20.21■□□□□ 0.83
C9orf47-202ENST00000375850 PRAMEF8Q5VWM4 474 aa20.21■□□□□ 0.83
C9orf47-202ENST00000375850 PRAMEF7Q5VXH5 474 aa20.21■□□□□ 0.83
C9orf47-202ENST00000375850 ANKRD16Q6P6B7 361 aa20.21■□□□□ 0.83
C9orf47-202ENST00000375850 ZNF836Q6ZNA1 936 aa20.21■□□□□ 0.83
C9orf47-202ENST00000375850 CADM2Q8N3J6 435 aa20.21■□□□□ 0.83
C9orf47-202ENST00000375850 SLC35B4Q969S0 331 aa20.21■□□□□ 0.83
C9orf47-202ENST00000375850 RAB1BQ9H0U4 201 aa20.21■□□□□ 0.83
C9orf47-202ENST00000375850 RLIMQ9NVW2 624 aa20.21■□□□□ 0.83
C9orf47-202ENST00000375850 RCE1Q9Y256 329 aa20.21■□□□□ 0.83
C9orf47-202ENST00000375850 GPR45Q9Y5Y3 372 aa20.21■□□□□ 0.83
C9orf47-202ENST00000375850 SDHDO14521 159 aa20.2■□□□□ 0.82
C9orf47-202ENST00000375850 NPIPB7O75200 414 aa20.2■□□□□ 0.82
C9orf47-202ENST00000375850 LY6HO94772 140 aa20.2■□□□□ 0.82
C9orf47-202ENST00000375850 AHSA1O95433 338 aa20.2■□□□□ 0.82
C9orf47-202ENST00000375850 LGI1O95970 557 aa20.2■□□□□ 0.82
C9orf47-202ENST00000375850 C1QCP02747 245 aa20.2■□□□□ 0.82
C9orf47-202ENST00000375850 GSNP06396 782 aa20.2■□□□□ 0.82
C9orf47-202ENST00000375850 GKN3PP0CG01 181 aa20.2■□□□□ 0.82
C9orf47-202ENST00000375850 ZCCHC18P0CG32 403 aa20.2■□□□□ 0.82
C9orf47-202ENST00000375850 NCF2P19878 526 aaPredicted RBP20.2■□□□□ 0.82
C9orf47-202ENST00000375850 IGFBP5P24593 272 aa20.2■□□□□ 0.82
C9orf47-202ENST00000375850 IL12AP29459 219 aa20.2■□□□□ 0.82
C9orf47-202ENST00000375850 P2RY4P51582 365 aa20.2■□□□□ 0.82
C9orf47-202ENST00000375850 NME5P56597 212 aa20.2■□□□□ 0.82
C9orf47-202ENST00000375850 NAAAQ02083 359 aa20.2■□□□□ 0.82
C9orf47-202ENST00000375850 NUP37Q8NFH4 326 aa20.2■□□□□ 0.82
C9orf47-202ENST00000375850 MFSD8Q8NHS3 518 aa20.2■□□□□ 0.82
C9orf47-202ENST00000375850 PNPT1Q8TCS8 783 aaKnown RBP20.2■□□□□ 0.82
C9orf47-202ENST00000375850 BCL2L2Q92843 193 aaPredicted RBP20.2■□□□□ 0.82
C9orf47-202ENST00000375850 VRK1Q99986 396 aaPredicted RBP20.2■□□□□ 0.82
C9orf47-202ENST00000375850 PLK3Q9H4B4 646 aa20.2■□□□□ 0.82
C9orf47-202ENST00000375850 PNPOQ9NVS9 261 aa20.2■□□□□ 0.82
C9orf47-202ENST00000375850 ZNF443Q9Y2A4 671 aaPredicted RBP20.2■□□□□ 0.82
C9orf47-202ENST00000375850 IFT52Q9Y366 437 aa20.2■□□□□ 0.82
C9orf47-202ENST00000375850 SLCO1B7G3V0H7 640 aa20.19■□□□□ 0.82
C9orf47-202ENST00000375850 HDAC3O15379 428 aa20.19■□□□□ 0.82
C9orf47-202ENST00000375850 IGLV1-44P01699 117 aa20.19■□□□□ 0.82
C9orf47-202ENST00000375850 OR4A8P0C604 315 aa20.19■□□□□ 0.82
C9orf47-202ENST00000375850 IDO1P14902 403 aa20.19■□□□□ 0.82
C9orf47-202ENST00000375850 SELENOPP49908 381 aa20.19■□□□□ 0.82
C9orf47-202ENST00000375850 BST1Q10588 318 aa20.19■□□□□ 0.82
C9orf47-202ENST00000375850 SQLEQ14534 574 aa20.19■□□□□ 0.82
C9orf47-202ENST00000375850 MAPK11Q15759 364 aa20.19■□□□□ 0.82
C9orf47-202ENST00000375850 KRTAP24-1Q3LI83 254 aa20.19■□□□□ 0.82
C9orf47-202ENST00000375850 NIPAL3Q6P499 406 aa20.19■□□□□ 0.82
C9orf47-202ENST00000375850 MSANTD1Q6ZTZ1 278 aa20.19■□□□□ 0.82
C9orf47-202ENST00000375850 CROCCP2Q86T23 111 aa20.19■□□□□ 0.82
C9orf47-202ENST00000375850 VRK2Q86Y07 508 aa20.19■□□□□ 0.82
C9orf47-202ENST00000375850 CCDC36Q8IYA8 594 aa20.19■□□□□ 0.82
C9orf47-202ENST00000375850 MSI2Q96DH6 328 aaKnown RBP20.19■□□□□ 0.82
C9orf47-202ENST00000375850 ALKBH3Q96Q83 286 aaPredicted RBP20.19■□□□□ 0.82
C9orf47-202ENST00000375850 PRR14Q9BWN1 585 aa20.19■□□□□ 0.82
C9orf47-202ENST00000375850 SPATA9Q9BWV2 254 aa20.19■□□□□ 0.82
C9orf47-202ENST00000375850 ZNF442Q9H7R0 627 aa20.19■□□□□ 0.82
C9orf47-202ENST00000375850 RMND5AQ9H871 391 aa20.19■□□□□ 0.82
C9orf47-202ENST00000375850 CUBNO60494 3623 aa20.19■□□□□ 0.82
C9orf47-202ENST00000375850 A0A0G2JPF8 293 aa20.18■□□□□ 0.82
C9orf47-202ENST00000375850 TMEM229AB2RXF0 380 aa20.18■□□□□ 0.82
C9orf47-202ENST00000375850 HNRNPCL2B2RXH8 293 aa20.18■□□□□ 0.82
C9orf47-202ENST00000375850 HNRNPCL3B7ZW38 293 aa20.18■□□□□ 0.82
C9orf47-202ENST00000375850 RPL36A-HNRNPH2H7BZ11 118 aa20.18■□□□□ 0.82
C9orf47-202ENST00000375850 HNRNPCL1O60812 293 aaKnown RBP20.18■□□□□ 0.82
C9orf47-202ENST00000375850 IGKV3-15P01624 115 aa20.18■□□□□ 0.82
C9orf47-202ENST00000375850 HNRNPCL4P0DMR1 293 aa20.18■□□□□ 0.82
C9orf47-202ENST00000375850 ZNF23P17027 643 aa20.18■□□□□ 0.82
C9orf47-202ENST00000375850 CRATP43155 626 aa20.18■□□□□ 0.82
C9orf47-202ENST00000375850 IDH3GP51553 393 aaPredicted RBP20.18■□□□□ 0.82
C9orf47-202ENST00000375850 MVDP53602 400 aa20.18■□□□□ 0.82
C9orf47-202ENST00000375850 DSTNP60981 165 aa20.18■□□□□ 0.82
C9orf47-202ENST00000375850 ADIPOQQ15848 244 aa20.18■□□□□ 0.82
C9orf47-202ENST00000375850 IQCCQ4KMZ1 466 aa20.18■□□□□ 0.82
C9orf47-202ENST00000375850 PDCD4Q53EL6 469 aaKnown RBP20.18■□□□□ 0.82
C9orf47-202ENST00000375850 FAM120AOSQ5T036 256 aa20.18■□□□□ 0.82
C9orf47-202ENST00000375850 C5orf46Q6UWT4 87 aa20.18■□□□□ 0.82
C9orf47-202ENST00000375850 EPHX4Q8IUS5 362 aa20.18■□□□□ 0.82
C9orf47-202ENST00000375850 SLC38A5Q8WUX1 472 aa20.18■□□□□ 0.82
C9orf47-202ENST00000375850 NEU4Q8WWR8 484 aaPredicted RBP20.18■□□□□ 0.82
C9orf47-202ENST00000375850 FOXN4Q96NZ1 517 aa20.18■□□□□ 0.82
C9orf47-202ENST00000375850 CHODLQ9H9P2 273 aa20.18■□□□□ 0.82
C9orf47-202ENST00000375850 HEATR1Q9H583 2144 aaKnown RBP20.18■□□□□ 0.82
C9orf47-202ENST00000375850 ANP32DO95626 131 aa20.17■□□□□ 0.82
C9orf47-202ENST00000375850 BCHEP06276 602 aa20.17■□□□□ 0.82
C9orf47-202ENST00000375850 CECR9P0C854 216 aa20.17■□□□□ 0.82
C9orf47-202ENST00000375850 GTF2E2P29084 291 aaKnown RBP20.17■□□□□ 0.82
C9orf47-202ENST00000375850 BNIP2Q12982 314 aa20.17■□□□□ 0.82
C9orf47-202ENST00000375850 CARTPTQ16568 116 aa20.17■□□□□ 0.82
C9orf47-202ENST00000375850 ARIH2OSQ8N7S6 290 aa20.17■□□□□ 0.82
C9orf47-202ENST00000375850 IL17RDQ8NFM7 739 aa20.17■□□□□ 0.82
C9orf47-202ENST00000375850 C3orf49Q96BT1 292 aa20.17■□□□□ 0.82
C9orf47-202ENST00000375850 ANKRD27Q96NW4 1050 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms