RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 COL28A1Q2UY09 1125 aa13.32□□□□□ -0.28
MSH5-201ENST00000375703 LGALSLQ3ZCW2 172 aaPredicted RBP13.32□□□□□ -0.28
MSH5-201ENST00000375703 SERPINA12Q8IW75 414 aa13.32□□□□□ -0.28
MSH5-201ENST00000375703 HGDQ93099 445 aa13.32□□□□□ -0.28
MSH5-201ENST00000375703 MED30Q96HR3 178 aa13.32□□□□□ -0.28
MSH5-201ENST00000375703 SORCS2Q96PQ0 1159 aa13.32□□□□□ -0.28
MSH5-201ENST00000375703 GFI1Q99684 422 aa13.32□□□□□ -0.28
MSH5-201ENST00000375703 TCEAL2Q9H3H9 227 aaPredicted RBP13.32□□□□□ -0.28
MSH5-201ENST00000375703 ANKRD10Q9NXR5 420 aa13.32□□□□□ -0.28
MSH5-201ENST00000375703 RCE1Q9Y256 329 aa13.32□□□□□ -0.28
MSH5-201ENST00000375703 A0A0A6YYC8 382 aaPredicted RBP13.31□□□□□ -0.28
MSH5-201ENST00000375703 A0A1B0GVT2 93 aa13.31□□□□□ -0.28
MSH5-201ENST00000375703 ANKRD61A6NGH8 418 aa13.31□□□□□ -0.28
MSH5-201ENST00000375703 I3L1I5 382 aaPredicted RBP13.31□□□□□ -0.28
MSH5-201ENST00000375703 AIPO00170 330 aa13.31□□□□□ -0.28
MSH5-201ENST00000375703 ZNF749O43361 778 aa13.31□□□□□ -0.28
MSH5-201ENST00000375703 PEX14O75381 377 aa13.31□□□□□ -0.28
MSH5-201ENST00000375703 OR7A10O76100 309 aa13.31□□□□□ -0.28
MSH5-201ENST00000375703 TYRP1P17643 537 aa13.31□□□□□ -0.28
MSH5-201ENST00000375703 AKT2P31751 481 aa13.31□□□□□ -0.28
MSH5-201ENST00000375703 UBE2IP63279 158 aaKnown RBP13.31□□□□□ -0.28
MSH5-201ENST00000375703 ERV3-1Q14264 604 aa13.31□□□□□ -0.28
MSH5-201ENST00000375703 FAM209AQ5JX71 171 aa13.31□□□□□ -0.28
MSH5-201ENST00000375703 FAM69AQ5T7M9 428 aa13.31□□□□□ -0.28
MSH5-201ENST00000375703 SLC35F3Q8IY50 421 aa13.31□□□□□ -0.28
MSH5-201ENST00000375703 C7orf61Q8IZ16 206 aa13.31□□□□□ -0.28
MSH5-201ENST00000375703 SLC37A2Q8TED4 501 aa13.31□□□□□ -0.28
MSH5-201ENST00000375703 GCDHQ92947 438 aaPredicted RBP13.31□□□□□ -0.28
MSH5-201ENST00000375703 NMNAT2Q9BZQ4 307 aa13.31□□□□□ -0.28
MSH5-201ENST00000375703 HEXA-AS1Q9H8Q6 139 aa13.31□□□□□ -0.28
MSH5-201ENST00000375703 HRASLSQ9HDD0 168 aa13.31□□□□□ -0.28
MSH5-201ENST00000375703 HCN3Q9P1Z3 774 aa13.31□□□□□ -0.28
MSH5-201ENST00000375703 SCP2D1Q9UJQ7 156 aa13.31□□□□□ -0.28
MSH5-201ENST00000375703 FLVCR2Q9UPI3 526 aa13.31□□□□□ -0.28
MSH5-201ENST00000375703 OR10H1Q9Y4A9 318 aa13.31□□□□□ -0.28
MSH5-201ENST00000375703 RNF215Q9Y6U7 377 aa13.31□□□□□ -0.28
MSH5-201ENST00000375703 V9GY05 133 aa13.31□□□□□ -0.28
MSH5-201ENST00000375703 DOCK8Q8NF50 2099 aa13.31□□□□□ -0.28
MSH5-201ENST00000375703 SERINC4A6NH21 518 aa13.31□□□□□ -0.28
MSH5-201ENST00000375703 BLOC1S5-TXNDC5H3BN57 136 aa13.31□□□□□ -0.28
MSH5-201ENST00000375703 TGFBR3LH3BV60 316 aa13.31□□□□□ -0.28
MSH5-201ENST00000375703 GLCEO94923 617 aa13.31□□□□□ -0.28
MSH5-201ENST00000375703 ST6GAL1P15907 406 aa13.31□□□□□ -0.28
MSH5-201ENST00000375703 DPP4P27487 766 aa13.31□□□□□ -0.28
MSH5-201ENST00000375703 PSMD4P55036 377 aaKnown RBP13.31□□□□□ -0.28
MSH5-201ENST00000375703 NANOS3P60323 173 aaKnown RBP13.31□□□□□ -0.28
MSH5-201ENST00000375703 ZNF542PQ5EBM4 170 aa13.31□□□□□ -0.28
MSH5-201ENST00000375703 LEG1Q6P5S2 330 aa13.31□□□□□ -0.28
MSH5-201ENST00000375703 RFPL4BQ6ZWI9 263 aa13.31□□□□□ -0.28
MSH5-201ENST00000375703 CCDC28AQ8IWP9 274 aa13.31□□□□□ -0.28
MSH5-201ENST00000375703 SDR16C5Q8N3Y7 309 aa13.31□□□□□ -0.28
MSH5-201ENST00000375703 OR52I2Q8NH67 350 aa13.31□□□□□ -0.28
MSH5-201ENST00000375703 GPBAR1Q8TDU6 330 aa13.31□□□□□ -0.28
MSH5-201ENST00000375703 DPCDQ9BVM2 203 aaPredicted RBP13.31□□□□□ -0.28
MSH5-201ENST00000375703 EIF3KQ9UBQ5 218 aaKnown RBP13.31□□□□□ -0.28
MSH5-201ENST00000375703 ZFPL1O95159 310 aa13.3□□□□□ -0.28
MSH5-201ENST00000375703 ECDO95905 644 aaPredicted RBP13.3□□□□□ -0.28
MSH5-201ENST00000375703 CT45A8P0DMV1 189 aa13.3□□□□□ -0.28
MSH5-201ENST00000375703 CT45A9P0DMV2 189 aa13.3□□□□□ -0.28
MSH5-201ENST00000375703 PSMB1P20618 241 aaKnown RBP13.3□□□□□ -0.28
MSH5-201ENST00000375703 TPMTP51580 245 aa13.3□□□□□ -0.28
MSH5-201ENST00000375703 PGDP52209 483 aa13.3□□□□□ -0.28
MSH5-201ENST00000375703 CLDN12P56749 244 aa13.3□□□□□ -0.28
MSH5-201ENST00000375703 PRPS1P60891 318 aa13.3□□□□□ -0.28
MSH5-201ENST00000375703 CT45A2Q5DJT8 189 aa13.3□□□□□ -0.28
MSH5-201ENST00000375703 ARMC6Q6NXE6 501 aa13.3□□□□□ -0.28
MSH5-201ENST00000375703 MOSPD2Q8NHP6 518 aa13.3□□□□□ -0.28
MSH5-201ENST00000375703 NXPE2Q96DL1 559 aa13.3□□□□□ -0.28
MSH5-201ENST00000375703 S100A16Q96FQ6 103 aaKnown RBP13.3□□□□□ -0.28
MSH5-201ENST00000375703 ALG12Q9BV10 488 aa13.3□□□□□ -0.28
MSH5-201ENST00000375703 LIN7BQ9HAP6 207 aa13.3□□□□□ -0.28
MSH5-201ENST00000375703 PLEKHA1Q9HB21 404 aa13.3□□□□□ -0.28
MSH5-201ENST00000375703 KLHL9Q9P2J3 617 aa13.3□□□□□ -0.28
MSH5-201ENST00000375703 LINC00862A6NCI5 91 aa13.3□□□□□ -0.28
MSH5-201ENST00000375703 OR2W5A6NFC9 320 aa13.3□□□□□ -0.28
MSH5-201ENST00000375703 GABARAPH6UMI1 98 aa13.3□□□□□ -0.28
MSH5-201ENST00000375703 KHNYNO15037 678 aaKnown RBP13.3□□□□□ -0.28
MSH5-201ENST00000375703 CTNSO60931 367 aa13.3□□□□□ -0.28
MSH5-201ENST00000375703 RPP14O95059 124 aaKnown RBP13.3□□□□□ -0.28
MSH5-201ENST00000375703 SSTR2P30874 369 aa13.3□□□□□ -0.28
MSH5-201ENST00000375703 CDKN2AP42771 156 aaKnown RBP13.3□□□□□ -0.28
MSH5-201ENST00000375703 ZNF81P51508 661 aa13.3□□□□□ -0.28
MSH5-201ENST00000375703 ISXQ2M1V0 245 aa13.3□□□□□ -0.28
MSH5-201ENST00000375703 SIX5Q8N196 739 aa13.3□□□□□ -0.28
MSH5-201ENST00000375703 BCORP1Q8N888 145 aa13.3□□□□□ -0.28
MSH5-201ENST00000375703 ZNF511Q8NB15 262 aa13.3□□□□□ -0.28
MSH5-201ENST00000375703 OR13H1Q8NG92 308 aa13.3□□□□□ -0.28
MSH5-201ENST00000375703 OR11G2Q8NGC1 345 aa13.3□□□□□ -0.28
MSH5-201ENST00000375703 FCAMRQ8WWV6 532 aa13.3□□□□□ -0.28
MSH5-201ENST00000375703 C3orf49Q96BT1 292 aa13.3□□□□□ -0.28
MSH5-201ENST00000375703 SLC25A38Q96DW6 304 aa13.3□□□□□ -0.28
MSH5-201ENST00000375703 GPR174Q9BXC1 333 aa13.3□□□□□ -0.28
MSH5-201ENST00000375703 ZNF436Q9C0F3 470 aaPredicted RBP13.3□□□□□ -0.28
MSH5-201ENST00000375703 OR10A4Q9H209 315 aa13.3□□□□□ -0.28
MSH5-201ENST00000375703 RXFP3Q9NSD7 469 aa13.3□□□□□ -0.28
MSH5-201ENST00000375703 KLK11Q9UBX7 282 aa13.3□□□□□ -0.28
MSH5-201ENST00000375703 ARHGEF17Q96PE2 2063 aaPredicted RBP13.29□□□□□ -0.28
MSH5-201ENST00000375703 OR5K3A6NET4 321 aa13.29□□□□□ -0.28
MSH5-201ENST00000375703 PRAMEF2O60811 474 aa13.29□□□□□ -0.28
MSH5-201ENST00000375703 ITGA10O75578 1167 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms