RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 CTRCQ99895 268 aa6.05□□□□□ -1.44
SMC1A-202ENST00000375340 PDE7BQ9NP56 450 aa6.05□□□□□ -1.44
SMC1A-202ENST00000375340 HINT3Q9NQE9 182 aaKnown RBP6.05□□□□□ -1.44
SMC1A-202ENST00000375340 SERTAD3Q9UJW9 196 aa6.05□□□□□ -1.44
SMC1A-202ENST00000375340 PIAS3Q9Y6X2 628 aa6.05□□□□□ -1.44
SMC1A-202ENST00000375340 A0A0B4J2A0 478 aa6.05□□□□□ -1.44
SMC1A-202ENST00000375340 B8ZZF3 427 aa6.05□□□□□ -1.44
SMC1A-202ENST00000375340 SLC33A1O00400 549 aaPredicted RBP6.05□□□□□ -1.44
SMC1A-202ENST00000375340 SLC16A7O60669 478 aa6.05□□□□□ -1.44
SMC1A-202ENST00000375340 HOXB3P14651 431 aaPredicted RBP6.05□□□□□ -1.44
SMC1A-202ENST00000375340 EPHA1P21709 976 aa6.05□□□□□ -1.44
SMC1A-202ENST00000375340 NFYAP23511 347 aaPredicted RBP6.05□□□□□ -1.44
SMC1A-202ENST00000375340 SGCBQ16585 318 aa6.05□□□□□ -1.44
SMC1A-202ENST00000375340 MFSD12Q6NUT3 480 aa6.05□□□□□ -1.44
SMC1A-202ENST00000375340 TEX19Q8NA77 164 aa6.05□□□□□ -1.44
SMC1A-202ENST00000375340 HHIPL1Q96JK4 782 aa6.05□□□□□ -1.44
SMC1A-202ENST00000375340 SAMD11Q96NU1 681 aa6.05□□□□□ -1.44
SMC1A-202ENST00000375340 NT5DC2Q9H857 520 aa6.05□□□□□ -1.44
SMC1A-202ENST00000375340 SLC6A20Q9NP91 592 aa6.05□□□□□ -1.44
SMC1A-202ENST00000375340 CPNE7Q9UBL6 633 aa6.05□□□□□ -1.44
SMC1A-202ENST00000375340 SHPKQ9UHJ6 478 aa6.05□□□□□ -1.44
SMC1A-202ENST00000375340 MBD1Q9UIS9 605 aaPredicted RBP6.05□□□□□ -1.44
SMC1A-202ENST00000375340 CD207Q9UJ71 328 aa6.05□□□□□ -1.44
SMC1A-202ENST00000375340 GPR55Q9Y2T6 319 aaPredicted RBP6.05□□□□□ -1.44
SMC1A-202ENST00000375340 TMEM14AQ9Y6G1 99 aa6.05□□□□□ -1.44
SMC1A-202ENST00000375340 SUSD5O60279 629 aa6.05□□□□□ -1.44
SMC1A-202ENST00000375340 MTRF1O75570 445 aaKnown RBP6.05□□□□□ -1.44
SMC1A-202ENST00000375340 APOC1P02654 83 aa6.05□□□□□ -1.44
SMC1A-202ENST00000375340 C1QBP02746 253 aa6.05□□□□□ -1.44
SMC1A-202ENST00000375340 PPP3CBP16298 524 aa6.05□□□□□ -1.44
SMC1A-202ENST00000375340 TM4SF4P48230 202 aa6.05□□□□□ -1.44
SMC1A-202ENST00000375340 VEGFBP49765 207 aa6.05□□□□□ -1.44
SMC1A-202ENST00000375340 ESCO2Q56NI9 601 aa6.05□□□□□ -1.44
SMC1A-202ENST00000375340 HACD4Q5VWC8 232 aa6.05□□□□□ -1.44
SMC1A-202ENST00000375340 ABHD17CQ6PCB6 329 aa6.05□□□□□ -1.44
SMC1A-202ENST00000375340 UEVLDQ8IX04 471 aa6.05□□□□□ -1.44
SMC1A-202ENST00000375340 FRMD1Q8N878 549 aa6.05□□□□□ -1.44
SMC1A-202ENST00000375340 ZNF511Q8NB15 262 aa6.05□□□□□ -1.44
SMC1A-202ENST00000375340 SEC22AQ96IW7 307 aa6.05□□□□□ -1.44
SMC1A-202ENST00000375340 DDOQ99489 341 aa6.05□□□□□ -1.44
SMC1A-202ENST00000375340 TIMM29Q9BSF4 260 aa6.05□□□□□ -1.44
SMC1A-202ENST00000375340 HDAC8Q9BY41 377 aa6.05□□□□□ -1.44
SMC1A-202ENST00000375340 MEPEQ9NQ76 525 aaPredicted RBP6.05□□□□□ -1.44
SMC1A-202ENST00000375340 NCDNQ9UBB6 729 aa6.05□□□□□ -1.44
SMC1A-202ENST00000375340 SLC23A2Q9UGH3 650 aa6.05□□□□□ -1.44
SMC1A-202ENST00000375340 RNF215Q9Y6U7 377 aa6.05□□□□□ -1.44
SMC1A-202ENST00000375340 CACNA1CQ13936 2221 aa6.05□□□□□ -1.44
SMC1A-202ENST00000375340 PRRT4C9JH25 899 aa6.05□□□□□ -1.44
SMC1A-202ENST00000375340 GAPDHSO14556 408 aaPredicted RBP6.05□□□□□ -1.44
SMC1A-202ENST00000375340 UBBP0CG47 229 aa6.05□□□□□ -1.44
SMC1A-202ENST00000375340 UBCP0CG48 685 aaKnown RBP6.05□□□□□ -1.44
SMC1A-202ENST00000375340 CD79BP40259 229 aa6.05□□□□□ -1.44
SMC1A-202ENST00000375340 RPS27AP62979 156 aaKnown RBP6.05□□□□□ -1.44
SMC1A-202ENST00000375340 UBA52P62987 128 aaKnown RBP6.05□□□□□ -1.44
SMC1A-202ENST00000375340 RSU1Q15404 277 aa6.05□□□□□ -1.44
SMC1A-202ENST00000375340 TANGO2Q6ICL3 276 aa6.05□□□□□ -1.44
SMC1A-202ENST00000375340 RBP7Q96R05 134 aa6.05□□□□□ -1.44
SMC1A-202ENST00000375340 CLCC1Q96S66 551 aa6.05□□□□□ -1.44
SMC1A-202ENST00000375340 VN1R3Q9BXE9 311 aa6.05□□□□□ -1.44
SMC1A-202ENST00000375340 RPS10P5Q9NQ39 176 aa6.05□□□□□ -1.44
SMC1A-202ENST00000375340 ASB6Q9NWX5 421 aa6.05□□□□□ -1.44
SMC1A-202ENST00000375340 ABRACLQ9P1F3 81 aa6.05□□□□□ -1.44
SMC1A-202ENST00000375340 hCG_1807616A0A1W2PRN6 198 aa6.05□□□□□ -1.44
SMC1A-202ENST00000375340 TMEM129A0AVI4 362 aa6.05□□□□□ -1.44
SMC1A-202ENST00000375340 H3BQ06 376 aaPredicted RBP6.05□□□□□ -1.44
SMC1A-202ENST00000375340 APBB3O95704 486 aa6.05□□□□□ -1.44
SMC1A-202ENST00000375340 MPIG6BO95866 241 aa6.05□□□□□ -1.44
SMC1A-202ENST00000375340 HTR3AP46098 478 aa6.05□□□□□ -1.44
SMC1A-202ENST00000375340 CAMLGP49069 296 aa6.05□□□□□ -1.44
SMC1A-202ENST00000375340 RAET1LQ5VY80 246 aa6.05□□□□□ -1.44
SMC1A-202ENST00000375340 LINC00346Q8IVM7 164 aa6.05□□□□□ -1.44
SMC1A-202ENST00000375340 MCATQ8IVS2 390 aaKnown RBP6.05□□□□□ -1.44
SMC1A-202ENST00000375340 LRRC18Q8N456 261 aa6.05□□□□□ -1.44
SMC1A-202ENST00000375340 OR52I2Q8NH67 350 aa6.05□□□□□ -1.44
SMC1A-202ENST00000375340 OR56B4Q8NH76 319 aa6.05□□□□□ -1.44
SMC1A-202ENST00000375340 HSD17B8Q92506 261 aa6.05□□□□□ -1.44
SMC1A-202ENST00000375340 SENP5Q96HI0 755 aaPredicted RBP6.05□□□□□ -1.44
SMC1A-202ENST00000375340 OR5B2Q96R09 309 aa6.05□□□□□ -1.44
SMC1A-202ENST00000375340 OR52A5Q9H2C5 316 aa6.05□□□□□ -1.44
SMC1A-202ENST00000375340 HRH4Q9H3N8 390 aa6.05□□□□□ -1.44
SMC1A-202ENST00000375340 A0A087WUU8 490 aa6.05□□□□□ -1.44
SMC1A-202ENST00000375340 TRABD2BA6NFA1 517 aa6.05□□□□□ -1.44
SMC1A-202ENST00000375340 NXPH3O95157 252 aa6.05□□□□□ -1.44
SMC1A-202ENST00000375340 HIST1H1CP16403 213 aaKnown RBP6.05□□□□□ -1.44
SMC1A-202ENST00000375340 RABIFP47224 123 aa6.05□□□□□ -1.44
SMC1A-202ENST00000375340 TLE3Q04726 772 aa6.05□□□□□ -1.44
SMC1A-202ENST00000375340 TSSK4Q6SA08 328 aa6.05□□□□□ -1.44
SMC1A-202ENST00000375340 OR52N1Q8NH53 320 aa6.05□□□□□ -1.44
SMC1A-202ENST00000375340 ZNF417Q8TAU3 575 aa6.05□□□□□ -1.44
SMC1A-202ENST00000375340 SERPINA2P20848 420 aa6.04□□□□□ -1.44
SMC1A-202ENST00000375340 TEAD1P28347 426 aa6.04□□□□□ -1.44
SMC1A-202ENST00000375340 PER3P56645 1201 aa6.04□□□□□ -1.44
SMC1A-202ENST00000375340 KIAA1024LP59773 190 aa6.04□□□□□ -1.44
SMC1A-202ENST00000375340 AMER3Q8N944 861 aa6.04□□□□□ -1.44
SMC1A-202ENST00000375340 MRPL43Q8N983 215 aaKnown RBP6.04□□□□□ -1.44
SMC1A-202ENST00000375340 OR4C15Q8NGM1 316 aa6.04□□□□□ -1.44
SMC1A-202ENST00000375340 OR51Q1Q8NH59 317 aa6.04□□□□□ -1.44
SMC1A-202ENST00000375340 S100PBPQ96BU1 408 aa6.04□□□□□ -1.44
SMC1A-202ENST00000375340 PDXPQ96GD0 296 aa6.04□□□□□ -1.44
SMC1A-202ENST00000375340 RNF170Q96K19 258 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms