RNA–Protein interactions for RNA: ENST00000375224.1

UBR4-202, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-202ENST00000375224 TBXA2RP21731 343 aa7.54□□□□□ -1.2
UBR4-202ENST00000375224 ADH7P40394 386 aa7.54□□□□□ -1.2
UBR4-202ENST00000375224 PPICP45877 212 aa7.54□□□□□ -1.2
UBR4-202ENST00000375224 RPS5P46782 204 aaKnown RBP7.54□□□□□ -1.2
UBR4-202ENST00000375224 OR1D5P58170 312 aa7.54□□□□□ -1.2
UBR4-202ENST00000375224 DCAF7P61962 342 aa7.54□□□□□ -1.2
UBR4-202ENST00000375224 FOXK2Q01167 660 aa7.54□□□□□ -1.2
UBR4-202ENST00000375224 BDH1Q02338 343 aa7.54□□□□□ -1.2
UBR4-202ENST00000375224 COL9A2Q14055 689 aaPredicted RBP7.54□□□□□ -1.2
UBR4-202ENST00000375224 PAN3Q58A45 887 aaKnown RBP7.54□□□□□ -1.2
UBR4-202ENST00000375224 PRPF38BQ5VTL8 546 aaKnown RBP7.54□□□□□ -1.2
UBR4-202ENST00000375224 NKAIN2Q5VXU1 208 aa7.54□□□□□ -1.2
UBR4-202ENST00000375224 OR7E24Q6IFN5 339 aa7.54□□□□□ -1.2
UBR4-202ENST00000375224 ARHGAP11AQ6P4F7 1023 aa7.54□□□□□ -1.2
UBR4-202ENST00000375224 LINC00114Q6XXX2 140 aa7.54□□□□□ -1.2
UBR4-202ENST00000375224 TTLL10Q6ZVT0 673 aa7.54□□□□□ -1.2
UBR4-202ENST00000375224 OAFQ86UD1 273 aa7.54□□□□□ -1.2
UBR4-202ENST00000375224 ADGRG3Q86Y34 549 aa7.54□□□□□ -1.2
UBR4-202ENST00000375224 D2HGDHQ8N465 521 aa7.54□□□□□ -1.2
UBR4-202ENST00000375224 METTL27Q8N6F8 245 aaPredicted RBP7.54□□□□□ -1.2
UBR4-202ENST00000375224 SVIPQ8NHG7 77 aa7.54□□□□□ -1.2
UBR4-202ENST00000375224 OTULINQ96BN8 352 aa7.54□□□□□ -1.2
UBR4-202ENST00000375224 NARS2Q96I59 477 aaKnown RBP7.54□□□□□ -1.2
UBR4-202ENST00000375224 RNF170Q96K19 258 aa7.54□□□□□ -1.2
UBR4-202ENST00000375224 CMTM3Q96MX0 182 aa7.54□□□□□ -1.2
UBR4-202ENST00000375224 MED18Q9BUE0 208 aa7.54□□□□□ -1.2
UBR4-202ENST00000375224 C20orf141Q9NUB4 165 aa7.54□□□□□ -1.2
UBR4-202ENST00000375224 TXNL4BQ9NX01 149 aaKnown RBP7.54□□□□□ -1.2
UBR4-202ENST00000375224 PCDHGB6Q9Y5F9 930 aa7.54□□□□□ -1.2
UBR4-202ENST00000375224 HRKO00198 91 aa7.53□□□□□ -1.2
UBR4-202ENST00000375224 GAAP10253 952 aa7.53□□□□□ -1.2
UBR4-202ENST00000375224 IL9P15248 144 aa7.53□□□□□ -1.2
UBR4-202ENST00000375224 GPR50Q13585 617 aa7.53□□□□□ -1.2
UBR4-202ENST00000375224 NIPAL3Q6P499 406 aa7.53□□□□□ -1.2
UBR4-202ENST00000375224 PLBD1Q6P4A8 553 aa7.53□□□□□ -1.2
UBR4-202ENST00000375224 LRFN4Q6PJG9 635 aa7.53□□□□□ -1.2
UBR4-202ENST00000375224 SSX9Q7RTT3 188 aa7.53□□□□□ -1.2
UBR4-202ENST00000375224 ACBD7Q8N6N7 88 aa7.53□□□□□ -1.2
UBR4-202ENST00000375224 SLC2A12Q8TD20 617 aa7.53□□□□□ -1.2
UBR4-202ENST00000375224 C1GALT1C1Q96EU7 318 aa7.53□□□□□ -1.2
UBR4-202ENST00000375224 SENP5Q96HI0 755 aaPredicted RBP7.53□□□□□ -1.2
UBR4-202ENST00000375224 MEPEQ9NQ76 525 aaPredicted RBP7.53□□□□□ -1.2
UBR4-202ENST00000375224 UBQLN4Q9NRR5 601 aa7.53□□□□□ -1.2
UBR4-202ENST00000375224 LANCL2Q9NS86 450 aa7.53□□□□□ -1.2
UBR4-202ENST00000375224 ERVK13-1Q9NX77 482 aa7.53□□□□□ -1.2
UBR4-202ENST00000375224 SLC23A1Q9UHI7 598 aa7.53□□□□□ -1.2
UBR4-202ENST00000375224 SPAG17Q6Q759 2223 aa7.53□□□□□ -1.2
UBR4-202ENST00000375224 A0A1B0GWJ7 208 aa7.53□□□□□ -1.2
UBR4-202ENST00000375224 CLN5O75503 358 aa7.53□□□□□ -1.2
UBR4-202ENST00000375224 TGM6O95932 706 aa7.53□□□□□ -1.2
UBR4-202ENST00000375224 HLA-DPB1P04440 258 aa7.53□□□□□ -1.2
UBR4-202ENST00000375224 PEPDP12955 493 aa7.53□□□□□ -1.2
UBR4-202ENST00000375224 GALP22466 123 aa7.53□□□□□ -1.2
UBR4-202ENST00000375224 FGF9P31371 208 aaPredicted RBP7.53□□□□□ -1.2
UBR4-202ENST00000375224 RPS19P39019 145 aaKnown RBP7.53□□□□□ -1.2
UBR4-202ENST00000375224 ARRB1P49407 418 aaPredicted RBP7.53□□□□□ -1.2
UBR4-202ENST00000375224 PLAURQ03405 335 aa7.53□□□□□ -1.2
UBR4-202ENST00000375224 POU4F2Q12837 409 aa7.53□□□□□ -1.2
UBR4-202ENST00000375224 OR2G6Q5TZ20 316 aa7.53□□□□□ -1.2
UBR4-202ENST00000375224 WDR74Q6RFH5 385 aaPredicted RBP7.53□□□□□ -1.2
UBR4-202ENST00000375224 GPAT4Q86UL3 456 aa7.53□□□□□ -1.2
UBR4-202ENST00000375224 LHFPL3Q86UP9 236 aa7.53□□□□□ -1.2
UBR4-202ENST00000375224 UBALD2Q8IYN6 164 aa7.53□□□□□ -1.2
UBR4-202ENST00000375224 PARP16Q8N5Y8 322 aa7.53□□□□□ -1.2
UBR4-202ENST00000375224 OR4F15Q8NGB8 312 aa7.53□□□□□ -1.2
UBR4-202ENST00000375224 OR13C2Q8NGS9 318 aa7.53□□□□□ -1.2
UBR4-202ENST00000375224 RNASE11Q8TAA1 199 aaKnown RBP7.53□□□□□ -1.2
UBR4-202ENST00000375224 AP3S1Q92572 193 aa7.53□□□□□ -1.2
UBR4-202ENST00000375224 SMURF1Q9HCE7 757 aa7.53□□□□□ -1.2
UBR4-202ENST00000375224 PRMT8Q9NR22 394 aaPredicted RBP7.53□□□□□ -1.2
UBR4-202ENST00000375224 PNO1Q9NRX1 252 aaKnown RBP7.53□□□□□ -1.2
UBR4-202ENST00000375224 IL20RAQ9UHF4 553 aa7.53□□□□□ -1.2
UBR4-202ENST00000375224 KLHL21Q9UJP4 597 aa7.53□□□□□ -1.2
UBR4-202ENST00000375224 ICAM5Q9UMF0 924 aa7.53□□□□□ -1.2
UBR4-202ENST00000375224 DTX4Q9Y2E6 619 aa7.53□□□□□ -1.2
UBR4-202ENST00000375224 CLCA3PQ9Y6N3 262 aa7.53□□□□□ -1.2
UBR4-202ENST00000375224 A0A1B0GTQ1 180 aa7.53□□□□□ -1.2
UBR4-202ENST00000375224 IQCMA0A1B0GVH7 501 aa7.53□□□□□ -1.2
UBR4-202ENST00000375224 TRDV1A0A1B0GX56 115 aa7.53□□□□□ -1.2
UBR4-202ENST00000375224 DBX1A6NMT0 343 aa7.53□□□□□ -1.2
UBR4-202ENST00000375224 SOCS6O14544 535 aa7.53□□□□□ -1.2
UBR4-202ENST00000375224 NDUFB2O95178 105 aa7.53□□□□□ -1.2
UBR4-202ENST00000375224 SLC2A10O95528 541 aa7.53□□□□□ -1.2
UBR4-202ENST00000375224 IL33O95760 270 aa7.53□□□□□ -1.2
UBR4-202ENST00000375224 IGF2P01344 180 aa7.53□□□□□ -1.2
UBR4-202ENST00000375224 PNMTP11086 282 aa7.53□□□□□ -1.2
UBR4-202ENST00000375224 BCKDHBP21953 392 aa7.53□□□□□ -1.2
UBR4-202ENST00000375224 FBLP22087 321 aaKnown RBP7.53□□□□□ -1.2
UBR4-202ENST00000375224 NOS3P29474 1203 aa7.53□□□□□ -1.2
UBR4-202ENST00000375224 RNF144AP50876 292 aaPredicted RBP7.53□□□□□ -1.2
UBR4-202ENST00000375224 FXYD6P3P58550 94 aa7.53□□□□□ -1.2
UBR4-202ENST00000375224 DEFA6Q01524 100 aa7.53□□□□□ -1.2
UBR4-202ENST00000375224 CRYZQ08257 329 aaKnown RBP7.53□□□□□ -1.2
UBR4-202ENST00000375224 ELAVL1Q15717 326 aaKnown RBP7.53□□□□□ -1.2
UBR4-202ENST00000375224 TUSC1Q2TAM9 212 aa7.53□□□□□ -1.2
UBR4-202ENST00000375224 CRTC2Q53ET0 693 aaPredicted RBP7.53□□□□□ -1.2
UBR4-202ENST00000375224 OR4M2Q8NGB6 313 aa7.53□□□□□ -1.2
UBR4-202ENST00000375224 LURAP1Q96LR2 239 aa7.53□□□□□ -1.2
UBR4-202ENST00000375224 HYLS1Q96M11 299 aa7.53□□□□□ -1.2
UBR4-202ENST00000375224 FRMD6Q96NE9 622 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms