RNA–Protein interactions for RNA: ENST00000373602.9

CCDC28B-201, Transcript of coiled-coil domain containing 28B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC28B, Length 1,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28B-201ENST00000373602 RASD1Q9Y272 281 aa19.05■□□□□ 0.64
CCDC28B-201ENST00000373602 ELOA3DA6NLF2 546 aaPredicted RBP19.04■□□□□ 0.64
CCDC28B-201ENST00000373602 SMAD7O15105 426 aaKnown RBP19.04■□□□□ 0.64
CCDC28B-201ENST00000373602 FZD7O75084 574 aa19.04■□□□□ 0.64
CCDC28B-201ENST00000373602 CD8AP01732 235 aa19.04■□□□□ 0.64
CCDC28B-201ENST00000373602 SLC6A2P23975 617 aa19.04■□□□□ 0.64
CCDC28B-201ENST00000373602 HTR2AP28223 471 aa19.04■□□□□ 0.64
CCDC28B-201ENST00000373602 ELOA3BQ3SY89 546 aa19.04■□□□□ 0.64
CCDC28B-201ENST00000373602 GLIPR1L2Q4G1C9 344 aa19.04■□□□□ 0.64
CCDC28B-201ENST00000373602 DTX2Q86UW9 622 aa19.04■□□□□ 0.64
CCDC28B-201ENST00000373602 EPHX4Q8IUS5 362 aa19.04■□□□□ 0.64
CCDC28B-201ENST00000373602 ELOA3Q8NG57 546 aa19.04■□□□□ 0.64
CCDC28B-201ENST00000373602 GTPBP3Q969Y2 492 aaKnown RBP19.04■□□□□ 0.64
CCDC28B-201ENST00000373602 FAIMQ9NVQ4 179 aa19.04■□□□□ 0.64
CCDC28B-201ENST00000373602 AMDHD2Q9Y303 409 aa19.04■□□□□ 0.64
CCDC28B-201ENST00000373602 NDUFAF1Q9Y375 327 aa19.04■□□□□ 0.64
CCDC28B-201ENST00000373602 A0A1B0GWA3 101 aa19.03■□□□□ 0.64
CCDC28B-201ENST00000373602 EDF1O60869 148 aaKnown RBP19.03■□□□□ 0.64
CCDC28B-201ENST00000373602 PNMTP11086 282 aa19.03■□□□□ 0.64
CCDC28B-201ENST00000373602 CDKN1AP38936 164 aa19.03■□□□□ 0.64
CCDC28B-201ENST00000373602 RPS5P46782 204 aaKnown RBP19.03■□□□□ 0.64
CCDC28B-201ENST00000373602 ETFDHQ16134 617 aa19.03■□□□□ 0.64
CCDC28B-201ENST00000373602 PIAS4Q8N2W9 510 aaPredicted RBP19.03■□□□□ 0.64
CCDC28B-201ENST00000373602 DPP10Q8N608 796 aa19.03■□□□□ 0.64
CCDC28B-201ENST00000373602 HIPK4Q8NE63 616 aa19.03■□□□□ 0.64
CCDC28B-201ENST00000373602 DNAJA4Q8WW22 397 aaPredicted RBP19.03■□□□□ 0.64
CCDC28B-201ENST00000373602 SLC25A36Q96CQ1 311 aa19.03■□□□□ 0.64
CCDC28B-201ENST00000373602 KTI12Q96EK9 354 aaPredicted RBP19.03■□□□□ 0.64
CCDC28B-201ENST00000373602 BOD1Q96IK1 185 aa19.03■□□□□ 0.64
CCDC28B-201ENST00000373602 ZNF607Q96SK3 696 aa19.03■□□□□ 0.64
CCDC28B-201ENST00000373602 SIKE1Q9BRV8 207 aa19.03■□□□□ 0.64
CCDC28B-201ENST00000373602 TRIM33Q9UPN9 1127 aa19.03■□□□□ 0.64
CCDC28B-201ENST00000373602 PRORSD1PA6NEY8 169 aa19.02■□□□□ 0.64
CCDC28B-201ENST00000373602 M0R1B8 84 aa19.02■□□□□ 0.64
CCDC28B-201ENST00000373602 SELENOPP49908 381 aa19.02■□□□□ 0.64
CCDC28B-201ENST00000373602 SLC25A3Q00325 362 aa19.02■□□□□ 0.64
CCDC28B-201ENST00000373602 SPOCK1Q08629 439 aa19.02■□□□□ 0.64
CCDC28B-201ENST00000373602 SLC22A25Q6T423 547 aa19.02■□□□□ 0.64
CCDC28B-201ENST00000373602 C5orf46Q6UWT4 87 aa19.02■□□□□ 0.64
CCDC28B-201ENST00000373602 ABHD12BQ7Z5M8 362 aaPredicted RBP19.02■□□□□ 0.64
CCDC28B-201ENST00000373602 DHDDSQ86SQ9 333 aa19.02■□□□□ 0.64
CCDC28B-201ENST00000373602 RETREG3Q86VR2 466 aa19.02■□□□□ 0.64
CCDC28B-201ENST00000373602 BHLHE22Q8NFJ8 381 aaPredicted RBP19.02■□□□□ 0.64
CCDC28B-201ENST00000373602 PRR14Q9BWN1 585 aa19.02■□□□□ 0.64
CCDC28B-201ENST00000373602 C1QTNF6Q9BXI9 259 aa19.02■□□□□ 0.64
CCDC28B-201ENST00000373602 ALG2Q9H553 416 aa19.02■□□□□ 0.64
CCDC28B-201ENST00000373602 NPHS2Q9NP85 383 aa19.02■□□□□ 0.64
CCDC28B-201ENST00000373602 OR6C65A6NJZ3 312 aa19.01■□□□□ 0.63
CCDC28B-201ENST00000373602 E7EQL1 145 aa19.01■□□□□ 0.63
CCDC28B-201ENST00000373602 OR2T1O43869 369 aa19.01■□□□□ 0.63
CCDC28B-201ENST00000373602 SERPINB7O75635 380 aa19.01■□□□□ 0.63
CCDC28B-201ENST00000373602 SASH3O75995 380 aa19.01■□□□□ 0.63
CCDC28B-201ENST00000373602 GTF2E2P29084 291 aaKnown RBP19.01■□□□□ 0.63
CCDC28B-201ENST00000373602 AQP1P29972 269 aa19.01■□□□□ 0.63
CCDC28B-201ENST00000373602 TNK1Q13470 666 aa19.01■□□□□ 0.63
CCDC28B-201ENST00000373602 CLEC12BQ2HXU8 276 aa19.01■□□□□ 0.63
CCDC28B-201ENST00000373602 ALG10BQ5I7T1 473 aa19.01■□□□□ 0.63
CCDC28B-201ENST00000373602 AGAP6Q5VW22 663 aa19.01■□□□□ 0.63
CCDC28B-201ENST00000373602 FAM91A1Q658Y4 838 aa19.01■□□□□ 0.63
CCDC28B-201ENST00000373602 ULK3Q6PHR2 472 aa19.01■□□□□ 0.63
CCDC28B-201ENST00000373602 TSPEARQ8WU66 669 aa19.01■□□□□ 0.63
CCDC28B-201ENST00000373602 SLC38A4Q969I6 547 aa19.01■□□□□ 0.63
CCDC28B-201ENST00000373602 TAAR8Q969N4 342 aa19.01■□□□□ 0.63
CCDC28B-201ENST00000373602 ANKRD27Q96NW4 1050 aa19.01■□□□□ 0.63
CCDC28B-201ENST00000373602 CGREF1Q99674 301 aa19.01■□□□□ 0.63
CCDC28B-201ENST00000373602 DHRS9Q9BPW9 319 aa19.01■□□□□ 0.63
CCDC28B-201ENST00000373602 EVA1AQ9H8M9 152 aa19.01■□□□□ 0.63
CCDC28B-201ENST00000373602 TESQ9UGI8 421 aaKnown RBP19.01■□□□□ 0.63
CCDC28B-201ENST00000373602 ANGPT4Q9Y264 503 aa19.01■□□□□ 0.63
CCDC28B-201ENST00000373602 IGKV1D-42A0A075B6H8 117 aa19■□□□□ 0.63
CCDC28B-201ENST00000373602 ANGPT2O15123 496 aa19■□□□□ 0.63
CCDC28B-201ENST00000373602 KRT33AO76009 404 aa19■□□□□ 0.63
CCDC28B-201ENST00000373602 MFN2O95140 757 aa19■□□□□ 0.63
CCDC28B-201ENST00000373602 TTKP33981 857 aa19■□□□□ 0.63
CCDC28B-201ENST00000373602 RGS8P57771 180 aaPredicted RBP19■□□□□ 0.63
CCDC28B-201ENST00000373602 PRPS1P60891 318 aa19■□□□□ 0.63
CCDC28B-201ENST00000373602 LGALS3BPQ08380 585 aa19■□□□□ 0.63
CCDC28B-201ENST00000373602 DMTNQ08495 405 aa19■□□□□ 0.63
CCDC28B-201ENST00000373602 FAM69AQ5T7M9 428 aa19■□□□□ 0.63
CCDC28B-201ENST00000373602 NIPAL3Q6P499 406 aa19■□□□□ 0.63
CCDC28B-201ENST00000373602 B3GLCTQ6Y288 498 aa19■□□□□ 0.63
CCDC28B-201ENST00000373602 NET1Q7Z628 596 aaPredicted RBP19■□□□□ 0.63
CCDC28B-201ENST00000373602 PTOV1Q86YD1 416 aa19■□□□□ 0.63
CCDC28B-201ENST00000373602 ARMC8Q8IUR7 673 aa19■□□□□ 0.63
CCDC28B-201ENST00000373602 DEPDC4Q8N2C3 294 aa19■□□□□ 0.63
CCDC28B-201ENST00000373602 KDM8Q8N371 416 aa19■□□□□ 0.63
CCDC28B-201ENST00000373602 C11orf65Q8NCR3 313 aa19■□□□□ 0.63
CCDC28B-201ENST00000373602 SLC47A1Q96FL8 570 aa19■□□□□ 0.63
CCDC28B-201ENST00000373602 OXGR1Q96P68 337 aa19■□□□□ 0.63
CCDC28B-201ENST00000373602 TMEM27Q9HBJ8 222 aa19■□□□□ 0.63
CCDC28B-201ENST00000373602 B3GAT1Q9P2W7 334 aa19■□□□□ 0.63
CCDC28B-201ENST00000373602 SEC14L4Q9UDX3 406 aa19■□□□□ 0.63
CCDC28B-201ENST00000373602 POU2F3Q9UKI9 436 aa19■□□□□ 0.63
CCDC28B-201ENST00000373602 TRAV36DV7A0A075B6V5 113 aa18.99■□□□□ 0.63
CCDC28B-201ENST00000373602 A0A0G2JND7 137 aa18.99■□□□□ 0.63
CCDC28B-201ENST00000373602 ZNF587BE7ETH6 402 aa18.99■□□□□ 0.63
CCDC28B-201ENST00000373602 AIM2O14862 343 aa18.99■□□□□ 0.63
CCDC28B-201ENST00000373602 TPST2O60704 377 aa18.99■□□□□ 0.63
CCDC28B-201ENST00000373602 WNT11O96014 354 aa18.99■□□□□ 0.63
CCDC28B-201ENST00000373602 IGHV4-39P01824 125 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms