RNA–Protein interactions for RNA: ENST00000373159.1

TRAPPC3-201, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 590 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-201ENST00000373159 ZNF786Q8N393 782 aa11.35□□□□□ -0.59
TRAPPC3-201ENST00000373159 TRIML2Q8N7C3 387 aa11.35□□□□□ -0.59
TRAPPC3-201ENST00000373159 ZNF781Q8N8C0 355 aa11.35□□□□□ -0.59
TRAPPC3-201ENST00000373159 ANKK1Q8NFD2 765 aa11.35□□□□□ -0.59
TRAPPC3-201ENST00000373159 C1orf159Q96HA4 380 aa11.35□□□□□ -0.59
TRAPPC3-201ENST00000373159 TAPBPLQ9BX59 468 aa11.35□□□□□ -0.59
TRAPPC3-201ENST00000373159 LINC00470Q9BZP3 86 aa11.35□□□□□ -0.59
TRAPPC3-201ENST00000373159 ZNF442Q9H7R0 627 aa11.35□□□□□ -0.59
TRAPPC3-201ENST00000373159 RLIMQ9NVW2 624 aa11.35□□□□□ -0.59
TRAPPC3-201ENST00000373159 TMEFF2Q9UIK5 374 aaPredicted RBP11.35□□□□□ -0.59
TRAPPC3-201ENST00000373159 RASD1Q9Y272 281 aa11.35□□□□□ -0.59
TRAPPC3-201ENST00000373159 CDHR4A6H8M9 788 aa11.34□□□□□ -0.59
TRAPPC3-201ENST00000373159 TMEM229AB2RXF0 380 aa11.34□□□□□ -0.59
TRAPPC3-201ENST00000373159 E9PBE3 544 aa11.34□□□□□ -0.59
TRAPPC3-201ENST00000373159 RPL36A-HNRNPH2H7BZ11 118 aa11.34□□□□□ -0.59
TRAPPC3-201ENST00000373159 NPIPB7O75200 414 aa11.34□□□□□ -0.59
TRAPPC3-201ENST00000373159 UPK3AO75631 287 aa11.34□□□□□ -0.59
TRAPPC3-201ENST00000373159 SNUPNO95149 360 aaKnown RBP11.34□□□□□ -0.59
TRAPPC3-201ENST00000373159 SERPINE1P05121 402 aa11.34□□□□□ -0.59
TRAPPC3-201ENST00000373159 ERCC1P07992 297 aaPredicted RBP11.34□□□□□ -0.59
TRAPPC3-201ENST00000373159 TFPTP0C1Z6 253 aa11.34□□□□□ -0.59
TRAPPC3-201ENST00000373159 GKN3PP0CG01 181 aa11.34□□□□□ -0.59
TRAPPC3-201ENST00000373159 NR2F1P10589 423 aa11.34□□□□□ -0.59
TRAPPC3-201ENST00000373159 DAOP14920 347 aa11.34□□□□□ -0.59
TRAPPC3-201ENST00000373159 CBR1P16152 277 aa11.34□□□□□ -0.59
TRAPPC3-201ENST00000373159 LBPP18428 481 aa11.34□□□□□ -0.59
TRAPPC3-201ENST00000373159 RPL14P50914 215 aaKnown RBP11.34□□□□□ -0.59
TRAPPC3-201ENST00000373159 CHN2P52757 468 aa11.34□□□□□ -0.59
TRAPPC3-201ENST00000373159 SH3BGRP55822 239 aaPredicted RBP11.34□□□□□ -0.59
TRAPPC3-201ENST00000373159 ABCE1P61221 599 aaKnown RBP11.34□□□□□ -0.59
TRAPPC3-201ENST00000373159 COPZ1P61923 177 aa11.34□□□□□ -0.59
TRAPPC3-201ENST00000373159 BNIP2Q12982 314 aa11.34□□□□□ -0.59
TRAPPC3-201ENST00000373159 FAM174BQ3ZCQ3 159 aa11.34□□□□□ -0.59
TRAPPC3-201ENST00000373159 VHLLQ6RSH7 139 aa11.34□□□□□ -0.59
TRAPPC3-201ENST00000373159 UGT2A3Q6UWM9 527 aa11.34□□□□□ -0.59
TRAPPC3-201ENST00000373159 PEX5LQ8IYB4 626 aa11.34□□□□□ -0.59
TRAPPC3-201ENST00000373159 LINC01356Q8N9X3 169 aa11.34□□□□□ -0.59
TRAPPC3-201ENST00000373159 ANKRD27Q96NW4 1050 aa11.34□□□□□ -0.59
TRAPPC3-201ENST00000373159 PANX1Q96RD7 426 aa11.34□□□□□ -0.59
TRAPPC3-201ENST00000373159 NELFAQ9H3P2 528 aa11.34□□□□□ -0.59
TRAPPC3-201ENST00000373159 ADPRHL2Q9NX46 363 aa11.34□□□□□ -0.59
TRAPPC3-201ENST00000373159 RAP2CQ9Y3L5 183 aa11.34□□□□□ -0.59
TRAPPC3-201ENST00000373159 A0A096LPE4 126 aa11.33□□□□□ -0.6
TRAPPC3-201ENST00000373159 A0A096LPI6 279 aa11.33□□□□□ -0.6
TRAPPC3-201ENST00000373159 A0A1W2PPZ6 126 aa11.33□□□□□ -0.6
TRAPPC3-201ENST00000373159 TMEM129A0AVI4 362 aa11.33□□□□□ -0.6
TRAPPC3-201ENST00000373159 hCG_2039718K7EN88 272 aa11.33□□□□□ -0.6
TRAPPC3-201ENST00000373159 NPR2P20594 1047 aa11.33□□□□□ -0.6
TRAPPC3-201ENST00000373159 IL2RGP31785 369 aa11.33□□□□□ -0.6
TRAPPC3-201ENST00000373159 THBS4P35443 961 aa11.33□□□□□ -0.6
TRAPPC3-201ENST00000373159 SRP14P37108 136 aaKnown RBP11.33□□□□□ -0.6
TRAPPC3-201ENST00000373159 TUBA1BP68363 451 aa11.33□□□□□ -0.6
TRAPPC3-201ENST00000373159 TUBA4AP68366 448 aa11.33□□□□□ -0.6
TRAPPC3-201ENST00000373159 IFFO1Q0D2I5 559 aa11.33□□□□□ -0.6
TRAPPC3-201ENST00000373159 LRRC74AQ0VAA2 488 aa11.33□□□□□ -0.6
TRAPPC3-201ENST00000373159 RIN1Q13671 783 aa11.33□□□□□ -0.6
TRAPPC3-201ENST00000373159 MAPK11Q15759 364 aa11.33□□□□□ -0.6
TRAPPC3-201ENST00000373159 COX20Q5RI15 118 aa11.33□□□□□ -0.6
TRAPPC3-201ENST00000373159 C1orf140Q5VVS0 124 aa11.33□□□□□ -0.6
TRAPPC3-201ENST00000373159 NIPAL3Q6P499 406 aa11.33□□□□□ -0.6
TRAPPC3-201ENST00000373159 ZNF621Q6ZSS3 439 aa11.33□□□□□ -0.6
TRAPPC3-201ENST00000373159 TUBA1AQ71U36 451 aa11.33□□□□□ -0.6
TRAPPC3-201ENST00000373159 STK35Q8TDR2 534 aa11.33□□□□□ -0.6
TRAPPC3-201ENST00000373159 TEX37Q96LM6 180 aa11.33□□□□□ -0.6
TRAPPC3-201ENST00000373159 ALKBH3Q96Q83 286 aaPredicted RBP11.33□□□□□ -0.6
TRAPPC3-201ENST00000373159 C20orf27Q9GZN8 174 aa11.33□□□□□ -0.6
TRAPPC3-201ENST00000373159 SEC61A2Q9H9S3 476 aa11.33□□□□□ -0.6
TRAPPC3-201ENST00000373159 PCDHB14Q9Y5E9 798 aa11.33□□□□□ -0.6
TRAPPC3-201ENST00000373159 MGAM2Q2M2H8 2515 aa11.32□□□□□ -0.6
TRAPPC3-201ENST00000373159 FTCDNL1E5RQL4 147 aa11.32□□□□□ -0.6
TRAPPC3-201ENST00000373159 BIRC5O15392 142 aa11.32□□□□□ -0.6
TRAPPC3-201ENST00000373159 FRS3O43559 492 aa11.32□□□□□ -0.6
TRAPPC3-201ENST00000373159 ZNF432O94892 652 aa11.32□□□□□ -0.6
TRAPPC3-201ENST00000373159 KRT75O95678 551 aa11.32□□□□□ -0.6
TRAPPC3-201ENST00000373159 IGFBP1P08833 259 aaPredicted RBP11.32□□□□□ -0.6
TRAPPC3-201ENST00000373159 ITGA2P17301 1181 aa11.32□□□□□ -0.6
TRAPPC3-201ENST00000373159 APEX1P27695 318 aaKnown RBP11.32□□□□□ -0.6
TRAPPC3-201ENST00000373159 ARR3P36575 388 aa11.32□□□□□ -0.6
TRAPPC3-201ENST00000373159 CDKN2CP42773 168 aa11.32□□□□□ -0.6
TRAPPC3-201ENST00000373159 CDH15P55291 814 aa11.32□□□□□ -0.6
TRAPPC3-201ENST00000373159 UFM1P61960 85 aa11.32□□□□□ -0.6
TRAPPC3-201ENST00000373159 ARF1P84077 181 aaKnown RBP11.32□□□□□ -0.6
TRAPPC3-201ENST00000373159 ROR2Q01974 943 aaKnown RBP11.32□□□□□ -0.6
TRAPPC3-201ENST00000373159 POU3F1Q03052 451 aaPredicted RBP11.32□□□□□ -0.6
TRAPPC3-201ENST00000373159 CHI3L2Q15782 390 aa11.32□□□□□ -0.6
TRAPPC3-201ENST00000373159 LIN52Q52LA3 116 aa11.32□□□□□ -0.6
TRAPPC3-201ENST00000373159 PRAMEF8Q5VWM4 474 aa11.32□□□□□ -0.6
TRAPPC3-201ENST00000373159 PRAMEF7Q5VXH5 474 aa11.32□□□□□ -0.6
TRAPPC3-201ENST00000373159 OGFOD2Q6N063 350 aa11.32□□□□□ -0.6
TRAPPC3-201ENST00000373159 SPATA21Q7Z572 469 aa11.32□□□□□ -0.6
TRAPPC3-201ENST00000373159 MEX3DQ86XN8 651 aaKnown RBP11.32□□□□□ -0.6
TRAPPC3-201ENST00000373159 VRK2Q86Y07 508 aa11.32□□□□□ -0.6
TRAPPC3-201ENST00000373159 CCDC36Q8IYA8 594 aa11.32□□□□□ -0.6
TRAPPC3-201ENST00000373159 KIRREL3Q8IZU9 778 aa11.32□□□□□ -0.6
TRAPPC3-201ENST00000373159 ZCCHC24Q8N2G6 241 aaKnown RBP11.32□□□□□ -0.6
TRAPPC3-201ENST00000373159 CADM2Q8N3J6 435 aa11.32□□□□□ -0.6
TRAPPC3-201ENST00000373159 SVOPLQ8N434 492 aa11.32□□□□□ -0.6
TRAPPC3-201ENST00000373159 IL17RDQ8NFM7 739 aa11.32□□□□□ -0.6
TRAPPC3-201ENST00000373159 OR52P1PQ8NH57 321 aa11.32□□□□□ -0.6
TRAPPC3-201ENST00000373159 MFSD8Q8NHS3 518 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms