RNA–Protein interactions for RNA: ENST00000370818.7

GPC3-201, Transcript of glypican 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC3, Length 2,568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-201ENST00000370818 CPOQ8IVL8 374 aa11.74□□□□□ -0.53
GPC3-201ENST00000370818 LNX2Q8N448 690 aa11.74□□□□□ -0.53
GPC3-201ENST00000370818 OR11H7Q8NGC8 314 aa11.74□□□□□ -0.53
GPC3-201ENST00000370818 ST8SIA2Q92186 375 aa11.74□□□□□ -0.53
GPC3-201ENST00000370818 CREB3L1Q96BA8 519 aa11.74□□□□□ -0.53
GPC3-201ENST00000370818 MVB12AQ96EY5 273 aa11.74□□□□□ -0.53
GPC3-201ENST00000370818 SLC41A2Q96JW4 573 aa11.74□□□□□ -0.53
GPC3-201ENST00000370818 PELOQ9BRX2 385 aaKnown RBP11.74□□□□□ -0.53
GPC3-201ENST00000370818 ZNF649Q9BS31 505 aa11.74□□□□□ -0.53
GPC3-201ENST00000370818 REG4Q9BYZ8 158 aa11.74□□□□□ -0.53
GPC3-201ENST00000370818 TRIM2Q9C040 744 aa11.74□□□□□ -0.53
GPC3-201ENST00000370818 MED28Q9H204 178 aa11.74□□□□□ -0.53
GPC3-201ENST00000370818 SLCO1C1Q9NYB5 712 aa11.74□□□□□ -0.53
GPC3-201ENST00000370818 TMEM5Q9Y2B1 443 aa11.74□□□□□ -0.53
GPC3-201ENST00000370818 CABIN1Q9Y6J0 2220 aa11.73□□□□□ -0.53
GPC3-201ENST00000370818 TRAV27A0A087WT01 109 aa11.73□□□□□ -0.53
GPC3-201ENST00000370818 SOCS6O14544 535 aa11.73□□□□□ -0.53
GPC3-201ENST00000370818 PTP4A3O75365 173 aa11.73□□□□□ -0.53
GPC3-201ENST00000370818 SAGP10523 405 aaPredicted RBP11.73□□□□□ -0.53
GPC3-201ENST00000370818 CPEP16870 476 aa11.73□□□□□ -0.53
GPC3-201ENST00000370818 SSTR2P30874 369 aa11.73□□□□□ -0.53
GPC3-201ENST00000370818 HTR1FP30939 366 aa11.73□□□□□ -0.53
GPC3-201ENST00000370818 SLC37A1P57057 533 aa11.73□□□□□ -0.53
GPC3-201ENST00000370818 BTG1P62324 171 aa11.73□□□□□ -0.53
GPC3-201ENST00000370818 FHL1Q13642 323 aa11.73□□□□□ -0.53
GPC3-201ENST00000370818 SMARCD3Q6STE5 483 aa11.73□□□□□ -0.53
GPC3-201ENST00000370818 KIRREL2Q6UWL6 708 aa11.73□□□□□ -0.53
GPC3-201ENST00000370818 LINC00114Q6XXX2 140 aa11.73□□□□□ -0.53
GPC3-201ENST00000370818 CEP76Q8TAP6 659 aa11.73□□□□□ -0.53
GPC3-201ENST00000370818 OR1F2PQ96R84 312 aa11.73□□□□□ -0.53
GPC3-201ENST00000370818 MS4A7Q9GZW8 240 aaPredicted RBP11.73□□□□□ -0.53
GPC3-201ENST00000370818 CLEC4MQ9H2X3 399 aaPredicted RBP11.73□□□□□ -0.53
GPC3-201ENST00000370818 EMC7Q9NPA0 242 aa11.73□□□□□ -0.53
GPC3-201ENST00000370818 PNO1Q9NRX1 252 aaKnown RBP11.73□□□□□ -0.53
GPC3-201ENST00000370818 MALT1Q9UDY8 824 aa11.73□□□□□ -0.53
GPC3-201ENST00000370818 PRODH2Q9UF12 536 aa11.73□□□□□ -0.53
GPC3-201ENST00000370818 EXOGQ9Y2C4 368 aaKnown RBP11.73□□□□□ -0.53
GPC3-201ENST00000370818 MMACHCQ9Y4U1 282 aa11.73□□□□□ -0.53
GPC3-201ENST00000370818 A0A1W2PPL8 197 aa11.73□□□□□ -0.53
GPC3-201ENST00000370818 SERINC4A6NH21 518 aa11.73□□□□□ -0.53
GPC3-201ENST00000370818 LINC01387J3KSC0 135 aa11.73□□□□□ -0.53
GPC3-201ENST00000370818 RCBTB2O95199 551 aa11.73□□□□□ -0.53
GPC3-201ENST00000370818 BMP7P18075 431 aa11.73□□□□□ -0.53
GPC3-201ENST00000370818 SDC2P34741 201 aa11.73□□□□□ -0.53
GPC3-201ENST00000370818 PUDPQ08623 228 aa11.73□□□□□ -0.53
GPC3-201ENST00000370818 BIKQ13323 160 aa11.73□□□□□ -0.53
GPC3-201ENST00000370818 TMEM44Q2T9K0 475 aa11.73□□□□□ -0.53
GPC3-201ENST00000370818 PLBD1Q6P4A8 553 aa11.73□□□□□ -0.53
GPC3-201ENST00000370818 CNIH2Q6PI25 160 aa11.73□□□□□ -0.53
GPC3-201ENST00000370818 LRFN4Q6PJG9 635 aa11.73□□□□□ -0.53
GPC3-201ENST00000370818 CXXC5Q7LFL8 322 aaKnown RBP11.73□□□□□ -0.53
GPC3-201ENST00000370818 ZNF550Q7Z398 422 aa11.73□□□□□ -0.53
GPC3-201ENST00000370818 CMIPQ8IY22 773 aa11.73□□□□□ -0.53
GPC3-201ENST00000370818 CDK20Q8IZL9 346 aa11.73□□□□□ -0.53
GPC3-201ENST00000370818 OR52L1Q8NGH7 329 aa11.73□□□□□ -0.53
GPC3-201ENST00000370818 OR51A7Q8NH64 312 aa11.73□□□□□ -0.53
GPC3-201ENST00000370818 GATAD2BQ8WXI9 593 aa11.73□□□□□ -0.53
GPC3-201ENST00000370818 ELF4Q99607 663 aaPredicted RBP11.73□□□□□ -0.53
GPC3-201ENST00000370818 LDAHQ9H6V9 325 aa11.73□□□□□ -0.53
GPC3-201ENST00000370818 EXOSC1Q9Y3B2 195 aaKnown RBP11.73□□□□□ -0.53
GPC3-201ENST00000370818 ARID1BQ8NFD5 2236 aaPredicted RBP11.72□□□□□ -0.53
GPC3-201ENST00000370818 SMIM30A4D0T7 59 aa11.72□□□□□ -0.53
GPC3-201ENST00000370818 LRRTM2O43300 516 aa11.72□□□□□ -0.53
GPC3-201ENST00000370818 CSTAP01040 98 aa11.72□□□□□ -0.53
GPC3-201ENST00000370818 IGKV3-11P04433 115 aa11.72□□□□□ -0.53
GPC3-201ENST00000370818 RBM34P42696 430 aaKnown RBP11.72□□□□□ -0.53
GPC3-201ENST00000370818 SLC1A3P43003 542 aa11.72□□□□□ -0.53
GPC3-201ENST00000370818 PSMD4P55036 377 aaKnown RBP11.72□□□□□ -0.53
GPC3-201ENST00000370818 GPR85P60893 370 aa11.72□□□□□ -0.53
GPC3-201ENST00000370818 DSG2Q14126 1118 aa11.72□□□□□ -0.53
GPC3-201ENST00000370818 KLHL26Q53HC5 615 aa11.72□□□□□ -0.53
GPC3-201ENST00000370818 IGSF11Q5DX21 431 aa11.72□□□□□ -0.53
GPC3-201ENST00000370818 C22orf42Q6IC83 251 aa11.72□□□□□ -0.53
GPC3-201ENST00000370818 RPL13AP3Q6NVV1 102 aa11.72□□□□□ -0.53
GPC3-201ENST00000370818 B3GLCTQ6Y288 498 aa11.72□□□□□ -0.53
GPC3-201ENST00000370818 RTL4Q6ZR62 310 aa11.72□□□□□ -0.53
GPC3-201ENST00000370818 QSOX2Q6ZRP7 698 aa11.72□□□□□ -0.53
GPC3-201ENST00000370818 LHFPL3Q86UP9 236 aa11.72□□□□□ -0.53
GPC3-201ENST00000370818 MS4A15Q8N5U1 240 aa11.72□□□□□ -0.53
GPC3-201ENST00000370818 NUDT22Q9BRQ3 303 aa11.72□□□□□ -0.53
GPC3-201ENST00000370818 HCAR1Q9BXC0 346 aa11.72□□□□□ -0.53
GPC3-201ENST00000370818 MED20Q9H944 212 aa11.72□□□□□ -0.53
GPC3-201ENST00000370818 PTTG3PQ9NZH4 202 aa11.72□□□□□ -0.53
GPC3-201ENST00000370818 ZNF222Q9UK12 451 aa11.72□□□□□ -0.53
GPC3-201ENST00000370818 SPIN1Q9Y657 262 aaPredicted RBP11.72□□□□□ -0.53
GPC3-201ENST00000370818 MUC3AQ02505 3323 aa11.72□□□□□ -0.53
GPC3-201ENST00000370818 TP53BP1Q12888 1972 aaPredicted RBP11.72□□□□□ -0.53
GPC3-201ENST00000370818 hCG_1807616A0A1W2PRN6 198 aa11.72□□□□□ -0.53
GPC3-201ENST00000370818 SYNDIG1LA6NDD5 238 aa11.72□□□□□ -0.53
GPC3-201ENST00000370818 J3QRE1 110 aa11.72□□□□□ -0.53
GPC3-201ENST00000370818 WDPCPO95876 746 aa11.72□□□□□ -0.53
GPC3-201ENST00000370818 IGHA1P01876 353 aa11.72□□□□□ -0.53
GPC3-201ENST00000370818 NUP62P37198 522 aaPredicted RBP11.72□□□□□ -0.53
GPC3-201ENST00000370818 FOXK2Q01167 660 aa11.72□□□□□ -0.53
GPC3-201ENST00000370818 ZSWIM7Q19AV6 140 aa11.72□□□□□ -0.53
GPC3-201ENST00000370818 BICRALQ6AI39 1079 aa11.72□□□□□ -0.53
GPC3-201ENST00000370818 ULK3Q6PHR2 472 aa11.72□□□□□ -0.53
GPC3-201ENST00000370818 WDR74Q6RFH5 385 aaPredicted RBP11.72□□□□□ -0.53
GPC3-201ENST00000370818 TMEM151BQ8IW70 566 aa11.72□□□□□ -0.53
GPC3-201ENST00000370818 SIRT6Q8N6T7 355 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms