RNA–Protein interactions for RNA: ENST00000368662.9

TUBE1-202, Transcript of tubulin epsilon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBE1, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-202ENST00000368662 DPY19L2P2Q6ZN68 376 aa11.08□□□□□ -0.64
TUBE1-202ENST00000368662 Q6ZPB1 254 aaPredicted RBP11.08□□□□□ -0.64
TUBE1-202ENST00000368662 ASB18Q6ZVZ8 466 aa11.08□□□□□ -0.64
TUBE1-202ENST00000368662 RBMXL3Q8N7X1 1067 aaKnown RBP11.08□□□□□ -0.64
TUBE1-202ENST00000368662 ADPRHL1Q8NDY3 354 aa11.08□□□□□ -0.64
TUBE1-202ENST00000368662 IFT27Q9BW83 186 aa11.08□□□□□ -0.64
TUBE1-202ENST00000368662 TP53TG5Q9Y2B4 290 aa11.08□□□□□ -0.64
TUBE1-202ENST00000368662 B3GALT5Q9Y2C3 310 aa11.08□□□□□ -0.64
TUBE1-202ENST00000368662 BHLHE40O14503 412 aa11.07□□□□□ -0.64
TUBE1-202ENST00000368662 ACTL6AO96019 429 aa11.07□□□□□ -0.64
TUBE1-202ENST00000368662 IMPDH2P12268 514 aa11.07□□□□□ -0.64
TUBE1-202ENST00000368662 RPL4P36578 427 aaKnown RBP11.07□□□□□ -0.64
TUBE1-202ENST00000368662 DIO1P49895 249 aa11.07□□□□□ -0.64
TUBE1-202ENST00000368662 ISL1P61371 349 aa11.07□□□□□ -0.64
TUBE1-202ENST00000368662 MYBPC1Q00872 1141 aa11.07□□□□□ -0.64
TUBE1-202ENST00000368662 PMS2P3Q13401 168 aa11.07□□□□□ -0.64
TUBE1-202ENST00000368662 PGGHGQ32M88 737 aa11.07□□□□□ -0.64
TUBE1-202ENST00000368662 TMEM236Q5W0B7 351 aa11.07□□□□□ -0.64
TUBE1-202ENST00000368662 H1FNTQ75WM6 255 aaPredicted RBP11.07□□□□□ -0.64
TUBE1-202ENST00000368662 LNX2Q8N448 690 aa11.07□□□□□ -0.64
TUBE1-202ENST00000368662 OR8J1Q8NGP2 316 aa11.07□□□□□ -0.64
TUBE1-202ENST00000368662 C9orf43Q8TAL5 461 aaPredicted RBP11.07□□□□□ -0.64
TUBE1-202ENST00000368662 LDAHQ9H6V9 325 aa11.07□□□□□ -0.64
TUBE1-202ENST00000368662 PNPLA3Q9NST1 481 aa11.07□□□□□ -0.64
TUBE1-202ENST00000368662 SLC6A5Q9Y345 797 aa11.07□□□□□ -0.64
TUBE1-202ENST00000368662 M0R082 166 aa11.06□□□□□ -0.64
TUBE1-202ENST00000368662 IDH3BO43837 385 aa11.06□□□□□ -0.64
TUBE1-202ENST00000368662 CELA3AP09093 270 aa11.06□□□□□ -0.64
TUBE1-202ENST00000368662 ADORA3P0DMS8 318 aa11.06□□□□□ -0.64
TUBE1-202ENST00000368662 GRK5P34947 590 aa11.06□□□□□ -0.64
TUBE1-202ENST00000368662 RPL18Q07020 188 aaKnown RBP11.06□□□□□ -0.64
TUBE1-202ENST00000368662 BCL2A1Q16548 175 aa11.06□□□□□ -0.64
TUBE1-202ENST00000368662 ARHGAP11AQ6P4F7 1023 aa11.06□□□□□ -0.64
TUBE1-202ENST00000368662 THSD4Q6ZMP0 1018 aa11.06□□□□□ -0.64
TUBE1-202ENST00000368662 NEIL3Q8TAT5 605 aa11.06□□□□□ -0.64
TUBE1-202ENST00000368662 ZNF417Q8TAU3 575 aa11.06□□□□□ -0.64
TUBE1-202ENST00000368662 SMPDL3BQ92485 455 aa11.06□□□□□ -0.64
TUBE1-202ENST00000368662 ZHX1-C8orf76Q96EF9 292 aa11.06□□□□□ -0.64
TUBE1-202ENST00000368662 NR1H4Q96RI1 486 aaPredicted RBP11.06□□□□□ -0.64
TUBE1-202ENST00000368662 ZNF587Q96SQ5 575 aaPredicted RBP11.06□□□□□ -0.64
TUBE1-202ENST00000368662 POLDIP3Q9BY77 421 aaKnown RBP11.06□□□□□ -0.64
TUBE1-202ENST00000368662 CHST11Q9NPF2 352 aa11.06□□□□□ -0.64
TUBE1-202ENST00000368662 NRIP3Q9NQ35 241 aa11.06□□□□□ -0.64
TUBE1-202ENST00000368662 TIGARQ9NQ88 270 aa11.06□□□□□ -0.64
TUBE1-202ENST00000368662 IL20RAQ9UHF4 553 aa11.06□□□□□ -0.64
TUBE1-202ENST00000368662 TRGV5A0A0B4J1U4 118 aa11.06□□□□□ -0.64
TUBE1-202ENST00000368662 A0A1W2PNR3 127 aa11.06□□□□□ -0.64
TUBE1-202ENST00000368662 PLPP3O14495 311 aa11.06□□□□□ -0.64
TUBE1-202ENST00000368662 ARPC3O15145 178 aa11.06□□□□□ -0.64
TUBE1-202ENST00000368662 SEC14L5O43304 696 aa11.06□□□□□ -0.64
TUBE1-202ENST00000368662 IGHG3P01860 377 aa11.06□□□□□ -0.64
TUBE1-202ENST00000368662 OPN1LWP04000 364 aa11.06□□□□□ -0.64
TUBE1-202ENST00000368662 APEHP13798 732 aaKnown RBP11.06□□□□□ -0.64
TUBE1-202ENST00000368662 SHC1P29353 583 aa11.06□□□□□ -0.64
TUBE1-202ENST00000368662 NOS3P29474 1203 aa11.06□□□□□ -0.64
TUBE1-202ENST00000368662 AQP2P41181 271 aa11.06□□□□□ -0.64
TUBE1-202ENST00000368662 OR2B6P58173 313 aa11.06□□□□□ -0.64
TUBE1-202ENST00000368662 RAC3P60763 192 aa11.06□□□□□ -0.64
TUBE1-202ENST00000368662 TEKQ02763 1124 aa11.06□□□□□ -0.64
TUBE1-202ENST00000368662 PUDPQ08623 228 aa11.06□□□□□ -0.64
TUBE1-202ENST00000368662 ZP4Q12836 540 aa11.06□□□□□ -0.64
TUBE1-202ENST00000368662 SNAPC1Q16533 368 aa11.06□□□□□ -0.64
TUBE1-202ENST00000368662 RNFT1Q5M7Z0 435 aa11.06□□□□□ -0.64
TUBE1-202ENST00000368662 ACSM5Q6NUN0 579 aa11.06□□□□□ -0.64
TUBE1-202ENST00000368662 PAQR6Q6TCH4 344 aa11.06□□□□□ -0.64
TUBE1-202ENST00000368662 PTCHD4Q6ZW05 846 aa11.06□□□□□ -0.64
TUBE1-202ENST00000368662 LSRQ86X29 649 aaPredicted RBP11.06□□□□□ -0.64
TUBE1-202ENST00000368662 CCDC71Q8IV32 467 aaPredicted RBP11.06□□□□□ -0.64
TUBE1-202ENST00000368662 ENTHD1Q8IYW4 607 aa11.06□□□□□ -0.64
TUBE1-202ENST00000368662 IQCF1Q8N6M8 205 aa11.06□□□□□ -0.64
TUBE1-202ENST00000368662 ABTB1Q969K4 478 aaPredicted RBP11.06□□□□□ -0.64
TUBE1-202ENST00000368662 PNPLA2Q96AD5 504 aa11.06□□□□□ -0.64
TUBE1-202ENST00000368662 DNAJA3Q96EY1 480 aa11.06□□□□□ -0.64
TUBE1-202ENST00000368662 PLEKHA8Q96JA3 519 aa11.06□□□□□ -0.64
TUBE1-202ENST00000368662 SLC6A15Q9H2J7 730 aa11.06□□□□□ -0.64
TUBE1-202ENST00000368662 FANCFQ9NPI8 374 aa11.06□□□□□ -0.64
TUBE1-202ENST00000368662 PAQR5Q9NXK6 330 aaPredicted RBP11.06□□□□□ -0.64
TUBE1-202ENST00000368662 TAS2R5Q9NYW4 299 aa11.06□□□□□ -0.64
TUBE1-202ENST00000368662 TVP23BQ9NYZ1 205 aa11.06□□□□□ -0.64
TUBE1-202ENST00000368662 UBAP1Q9NZ09 502 aa11.06□□□□□ -0.64
TUBE1-202ENST00000368662 NCKAP5O14513 1909 aa11.06□□□□□ -0.64
TUBE1-202ENST00000368662 MCIDASD6RGH6 385 aa11.05□□□□□ -0.64
TUBE1-202ENST00000368662 K7EM74 188 aa11.05□□□□□ -0.64
TUBE1-202ENST00000368662 EIF1AYO14602 144 aaKnown RBP11.05□□□□□ -0.64
TUBE1-202ENST00000368662 RNF13O43567 381 aa11.05□□□□□ -0.64
TUBE1-202ENST00000368662 CRYABP02511 175 aaKnown RBP11.05□□□□□ -0.64
TUBE1-202ENST00000368662 CD14P08571 375 aa11.05□□□□□ -0.64
TUBE1-202ENST00000368662 FREM3P0C091 2139 aa11.05□□□□□ -0.64
TUBE1-202ENST00000368662 PCYT1AP49585 367 aa11.05□□□□□ -0.64
TUBE1-202ENST00000368662 SNRPGP62308 76 aaKnown RBP11.05□□□□□ -0.64
TUBE1-202ENST00000368662 PMP22Q01453 160 aa11.05□□□□□ -0.64
TUBE1-202ENST00000368662 MAD2L1BPQ15013 274 aaPredicted RBP11.05□□□□□ -0.64
TUBE1-202ENST00000368662 ZNF239Q16600 458 aaKnown RBP11.05□□□□□ -0.64
TUBE1-202ENST00000368662 HBMQ6B0K9 141 aa11.05□□□□□ -0.64
TUBE1-202ENST00000368662 GGNQ86UU5 652 aa11.05□□□□□ -0.64
TUBE1-202ENST00000368662 MEIOBQ8N635 442 aa11.05□□□□□ -0.64
TUBE1-202ENST00000368662 OR4Q3Q8NH05 313 aa11.05□□□□□ -0.64
TUBE1-202ENST00000368662 OR2V1Q8NHB1 315 aa11.05□□□□□ -0.64
TUBE1-202ENST00000368662 MOSPD2Q8NHP6 518 aa11.05□□□□□ -0.64
TUBE1-202ENST00000368662 RHOXF1Q8NHV9 184 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms