RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 H0YGG7 62 aa12.85□□□□□ -0.35
COL6A1-201ENST00000361866 SLC16A7O60669 478 aa12.85□□□□□ -0.35
COL6A1-201ENST00000361866 KNG1P01042 644 aa12.85□□□□□ -0.35
COL6A1-201ENST00000361866 SLC2A5P22732 501 aa12.85□□□□□ -0.35
COL6A1-201ENST00000361866 CTGFP29279 349 aa12.85□□□□□ -0.35
COL6A1-201ENST00000361866 DCTDP32321 178 aa12.85□□□□□ -0.35
COL6A1-201ENST00000361866 TRHRP34981 398 aaPredicted RBP12.85□□□□□ -0.35
COL6A1-201ENST00000361866 PCBP3P57721 371 aaKnown RBP12.85□□□□□ -0.35
COL6A1-201ENST00000361866 ARF3P61204 181 aaPredicted RBP12.85□□□□□ -0.35
COL6A1-201ENST00000361866 ABCA11PQ4W5N1 156 aa12.85□□□□□ -0.35
COL6A1-201ENST00000361866 CARD17Q5XLA6 110 aa12.85□□□□□ -0.35
COL6A1-201ENST00000361866 UNQ6126/PRO20091Q6UXV3 157 aa12.85□□□□□ -0.35
COL6A1-201ENST00000361866 CMTM4Q8IZR5 234 aa12.85□□□□□ -0.35
COL6A1-201ENST00000361866 BPIFB2Q8N4F0 458 aa12.85□□□□□ -0.35
COL6A1-201ENST00000361866 GOT1L1Q8NHS2 421 aaPredicted RBP12.85□□□□□ -0.35
COL6A1-201ENST00000361866 ST8SIA2Q92186 375 aa12.85□□□□□ -0.35
COL6A1-201ENST00000361866 GAS2L1Q99501 681 aaPredicted RBP12.85□□□□□ -0.35
COL6A1-201ENST00000361866 ELOVL3Q9HB03 270 aa12.85□□□□□ -0.35
COL6A1-201ENST00000361866 B3GAT2Q9NPZ5 323 aa12.85□□□□□ -0.35
COL6A1-201ENST00000361866 MAN2C1Q9NTJ4 1040 aa12.85□□□□□ -0.35
COL6A1-201ENST00000361866 LY75O60449 1722 aa12.85□□□□□ -0.35
COL6A1-201ENST00000361866 TPRP12270 2363 aaKnown RBP12.85□□□□□ -0.35
COL6A1-201ENST00000361866 CHP2O43745 196 aa12.85□□□□□ -0.35
COL6A1-201ENST00000361866 FADS1O60427 444 aa12.85□□□□□ -0.35
COL6A1-201ENST00000361866 IFNA21P01568 189 aa12.85□□□□□ -0.35
COL6A1-201ENST00000361866 F3P13726 295 aa12.85□□□□□ -0.35
COL6A1-201ENST00000361866 RBMS2Q15434 407 aaKnown RBP12.85□□□□□ -0.35
COL6A1-201ENST00000361866 METRNLQ641Q3 311 aa12.85□□□□□ -0.35
COL6A1-201ENST00000361866 CAMKMTQ7Z624 323 aa12.85□□□□□ -0.35
COL6A1-201ENST00000361866 OR51S1Q8NGJ8 323 aa12.85□□□□□ -0.35
COL6A1-201ENST00000361866 OR52B4Q8NGK2 314 aa12.85□□□□□ -0.35
COL6A1-201ENST00000361866 RBP7Q96R05 134 aa12.85□□□□□ -0.35
COL6A1-201ENST00000361866 CLDND1Q9NY35 253 aa12.85□□□□□ -0.35
COL6A1-201ENST00000361866 ARRDC5A6NEK1 342 aa12.84□□□□□ -0.35
COL6A1-201ENST00000361866 CCSO14618 274 aa12.84□□□□□ -0.35
COL6A1-201ENST00000361866 PRAMEF2O60811 474 aa12.84□□□□□ -0.35
COL6A1-201ENST00000361866 OPN1LWP04000 364 aa12.84□□□□□ -0.35
COL6A1-201ENST00000361866 CSF1P09603 554 aa12.84□□□□□ -0.35
COL6A1-201ENST00000361866 CXCL3P19876 107 aa12.84□□□□□ -0.35
COL6A1-201ENST00000361866 C5AR1P21730 350 aa12.84□□□□□ -0.35
COL6A1-201ENST00000361866 PRPS1P60891 318 aa12.84□□□□□ -0.35
COL6A1-201ENST00000361866 MAT1AQ00266 395 aaKnown RBP12.84□□□□□ -0.35
COL6A1-201ENST00000361866 FGL1Q08830 312 aa12.84□□□□□ -0.35
COL6A1-201ENST00000361866 ZNF169Q14929 603 aaPredicted RBP12.84□□□□□ -0.35
COL6A1-201ENST00000361866 MPEG1Q2M385 716 aa12.84□□□□□ -0.35
COL6A1-201ENST00000361866 KRBOX4Q5JUW0 171 aa12.84□□□□□ -0.35
COL6A1-201ENST00000361866 ZBTB8AQ96BR9 441 aa12.84□□□□□ -0.35
COL6A1-201ENST00000361866 SLC6A17Q9H1V8 727 aa12.84□□□□□ -0.35
COL6A1-201ENST00000361866 EPHX3Q9H6B9 360 aa12.84□□□□□ -0.35
COL6A1-201ENST00000361866 RTTNQ86VV8 2226 aa12.84□□□□□ -0.35
COL6A1-201ENST00000361866 NPC1O15118 1278 aa12.84□□□□□ -0.35
COL6A1-201ENST00000361866 HIST1H1CP16403 213 aaKnown RBP12.84□□□□□ -0.35
COL6A1-201ENST00000361866 ZNF14P17017 642 aaPredicted RBP12.84□□□□□ -0.35
COL6A1-201ENST00000361866 CBX5P45973 191 aa12.84□□□□□ -0.35
COL6A1-201ENST00000361866 HACD4Q5VWC8 232 aa12.84□□□□□ -0.35
COL6A1-201ENST00000361866 DNM1P34Q6PK57 102 aa12.84□□□□□ -0.35
COL6A1-201ENST00000361866 SLC29A4Q7RTT9 530 aa12.84□□□□□ -0.35
COL6A1-201ENST00000361866 SLC35F3Q8IY50 421 aa12.84□□□□□ -0.35
COL6A1-201ENST00000361866 FBXL6Q8N531 539 aa12.84□□□□□ -0.35
COL6A1-201ENST00000361866 MRPL43Q8N983 215 aaKnown RBP12.84□□□□□ -0.35
COL6A1-201ENST00000361866 PNLDC1Q8NA58 520 aaKnown RBP12.84□□□□□ -0.35
COL6A1-201ENST00000361866 PLPP7Q8NBV4 271 aa12.84□□□□□ -0.35
COL6A1-201ENST00000361866 STEAP2Q8NFT2 490 aa12.84□□□□□ -0.35
COL6A1-201ENST00000361866 TGM7Q96PF1 710 aa12.84□□□□□ -0.35
COL6A1-201ENST00000361866 INTS14Q96SY0 518 aa12.84□□□□□ -0.35
COL6A1-201ENST00000361866 PRODH2Q9UF12 536 aa12.84□□□□□ -0.35
COL6A1-201ENST00000361866 hCG_1807616A0A1W2PRN6 198 aa12.84□□□□□ -0.35
COL6A1-201ENST00000361866 E9PI62 339 aa12.84□□□□□ -0.35
COL6A1-201ENST00000361866 GPRIN2O60269 458 aa12.84□□□□□ -0.35
COL6A1-201ENST00000361866 RAB40ALP0C0E4 278 aa12.84□□□□□ -0.35
COL6A1-201ENST00000361866 FAM209AQ5JX71 171 aa12.84□□□□□ -0.35
COL6A1-201ENST00000361866 RNF113BQ8IZP6 322 aaKnown RBP12.84□□□□□ -0.35
COL6A1-201ENST00000361866 RAB40AQ8WXH6 277 aa12.84□□□□□ -0.35
COL6A1-201ENST00000361866 RNF170Q96K19 258 aa12.84□□□□□ -0.35
COL6A1-201ENST00000361866 HRH4Q9H3N8 390 aa12.84□□□□□ -0.35
COL6A1-201ENST00000361866 CYSLTR2Q9NS75 346 aa12.84□□□□□ -0.35
COL6A1-201ENST00000361866 REV1Q9UBZ9 1251 aa12.84□□□□□ -0.35
COL6A1-201ENST00000361866 HCFC2Q9Y5Z7 792 aa12.84□□□□□ -0.35
COL6A1-201ENST00000361866 A0A1W2PS29 197 aa12.83□□□□□ -0.35
COL6A1-201ENST00000361866 RFXAPO00287 272 aa12.83□□□□□ -0.35
COL6A1-201ENST00000361866 DPM1O60762 260 aa12.83□□□□□ -0.35
COL6A1-201ENST00000361866 GCM2O75603 506 aaPredicted RBP12.83□□□□□ -0.35
COL6A1-201ENST00000361866 MPIG6BO95866 241 aa12.83□□□□□ -0.35
COL6A1-201ENST00000361866 HOXB3P14651 431 aaPredicted RBP12.83□□□□□ -0.35
COL6A1-201ENST00000361866 RBMXP38159 391 aaKnown RBP12.83□□□□□ -0.35
COL6A1-201ENST00000361866 LUMP51884 338 aaPredicted RBP12.83□□□□□ -0.35
COL6A1-201ENST00000361866 TNFRSF17Q02223 184 aa12.83□□□□□ -0.35
COL6A1-201ENST00000361866 ZXDCQ2QGD7 858 aaPredicted RBP12.83□□□□□ -0.35
COL6A1-201ENST00000361866 LIPNQ5VXI9 398 aa12.83□□□□□ -0.35
COL6A1-201ENST00000361866 SLC18B1Q6NT16 456 aa12.83□□□□□ -0.35
COL6A1-201ENST00000361866 FGF13Q92913 245 aa12.83□□□□□ -0.35
COL6A1-201ENST00000361866 GPA33Q99795 319 aa12.83□□□□□ -0.35
COL6A1-201ENST00000361866 MED18Q9BUE0 208 aa12.83□□□□□ -0.35
COL6A1-201ENST00000361866 OR52A5Q9H2C5 316 aa12.83□□□□□ -0.35
COL6A1-201ENST00000361866 PRSS16Q9NQE7 514 aa12.83□□□□□ -0.35
COL6A1-201ENST00000361866 NCDNQ9UBB6 729 aa12.83□□□□□ -0.35
COL6A1-201ENST00000361866 ZNF726A6NNF4 738 aa12.83□□□□□ -0.36
COL6A1-201ENST00000361866 KRBOX1C9JBD0 128 aa12.83□□□□□ -0.36
COL6A1-201ENST00000361866 ZNF28P17035 718 aa12.83□□□□□ -0.36
COL6A1-201ENST00000361866 ATF1P18846 271 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms