RNA–Protein interactions for RNA: ENST00000361439.8

NSMCE1-201, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE1, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-201ENST00000361439 LIMS1P48059 325 aa12.34□□□□□ -0.43
NSMCE1-201ENST00000361439 SLC9A3P48764 834 aa12.34□□□□□ -0.43
NSMCE1-201ENST00000361439 P2RY4P51582 365 aa12.34□□□□□ -0.43
NSMCE1-201ENST00000361439 ADORA2A-AS1P86434 159 aa12.34□□□□□ -0.43
NSMCE1-201ENST00000361439 RASGEF1BQ0VAM2 473 aa12.34□□□□□ -0.43
NSMCE1-201ENST00000361439 FGD3Q5JSP0 725 aa12.34□□□□□ -0.43
NSMCE1-201ENST00000361439 OTUD3Q5T2D3 398 aaPredicted RBP12.34□□□□□ -0.43
NSMCE1-201ENST00000361439 PODNL1Q6PEZ8 512 aa12.34□□□□□ -0.43
NSMCE1-201ENST00000361439 CLEC18BQ6UXF7 455 aa12.34□□□□□ -0.43
NSMCE1-201ENST00000361439 TMPRSS11FQ6ZWK6 438 aa12.34□□□□□ -0.43
NSMCE1-201ENST00000361439 FAM214BQ7L5A3 538 aa12.34□□□□□ -0.43
NSMCE1-201ENST00000361439 HIST3H2AQ7L7L0 130 aa12.34□□□□□ -0.43
NSMCE1-201ENST00000361439 NRMQ8IXM6 262 aa12.34□□□□□ -0.43
NSMCE1-201ENST00000361439 FAM26EQ8N5C1 309 aa12.34□□□□□ -0.43
NSMCE1-201ENST00000361439 CLEC18CQ8NCF0 446 aa12.34□□□□□ -0.43
NSMCE1-201ENST00000361439 OR5J2Q8NH18 312 aa12.34□□□□□ -0.43
NSMCE1-201ENST00000361439 ROBO4Q8WZ75 1007 aa12.34□□□□□ -0.43
NSMCE1-201ENST00000361439 HIST1H2ACQ93077 130 aa12.34□□□□□ -0.43
NSMCE1-201ENST00000361439 SLCO4A1Q96BD0 722 aa12.34□□□□□ -0.43
NSMCE1-201ENST00000361439 SLC25A36Q96CQ1 311 aa12.34□□□□□ -0.43
NSMCE1-201ENST00000361439 BPIFA2Q96DR5 249 aa12.34□□□□□ -0.43
NSMCE1-201ENST00000361439 ALPK1Q96QP1 1244 aa12.34□□□□□ -0.43
NSMCE1-201ENST00000361439 REEP1Q9H902 201 aa12.34□□□□□ -0.43
NSMCE1-201ENST00000361439 CHST11Q9NPF2 352 aa12.34□□□□□ -0.43
NSMCE1-201ENST00000361439 KLHL13Q9P2N7 655 aa12.34□□□□□ -0.43
NSMCE1-201ENST00000361439 DNAJB9Q9UBS3 223 aa12.34□□□□□ -0.43
NSMCE1-201ENST00000361439 EMC9Q9Y3B6 208 aa12.34□□□□□ -0.43
NSMCE1-201ENST00000361439 A0A0G2JNJ9 132 aa12.33□□□□□ -0.44
NSMCE1-201ENST00000361439 TRBV4-1A0A0J9YWV2 114 aa12.33□□□□□ -0.44
NSMCE1-201ENST00000361439 ENO4A6NNW6 628 aa12.33□□□□□ -0.44
NSMCE1-201ENST00000361439 ZNF716A6NP11 495 aa12.33□□□□□ -0.44
NSMCE1-201ENST00000361439 KDM4EB2RXH2 506 aaPredicted RBP12.33□□□□□ -0.44
NSMCE1-201ENST00000361439 TNFRSF11BO00300 401 aa12.33□□□□□ -0.44
NSMCE1-201ENST00000361439 DVL2O14641 736 aa12.33□□□□□ -0.44
NSMCE1-201ENST00000361439 CLOCKO15516 846 aa12.33□□□□□ -0.44
NSMCE1-201ENST00000361439 DEAF1O75398 565 aaPredicted RBP12.33□□□□□ -0.44
NSMCE1-201ENST00000361439 OR7A10O76100 309 aa12.33□□□□□ -0.44
NSMCE1-201ENST00000361439 AKR7A3O95154 331 aa12.33□□□□□ -0.44
NSMCE1-201ENST00000361439 CH25HO95992 272 aa12.33□□□□□ -0.44
NSMCE1-201ENST00000361439 TSPAN19P0C672 248 aa12.33□□□□□ -0.44
NSMCE1-201ENST00000361439 TMIGD3P0DMS9 266 aaPredicted RBP12.33□□□□□ -0.44
NSMCE1-201ENST00000361439 GRPRP30550 384 aa12.33□□□□□ -0.44
NSMCE1-201ENST00000361439 SLC17A1Q14916 467 aa12.33□□□□□ -0.44
NSMCE1-201ENST00000361439 KPNB1Q14974 876 aaKnown RBP12.33□□□□□ -0.44
NSMCE1-201ENST00000361439 TAF11Q15544 211 aa12.33□□□□□ -0.44
NSMCE1-201ENST00000361439 TMEM225Q6GV28 225 aa12.33□□□□□ -0.44
NSMCE1-201ENST00000361439 PPP4R4Q6NUP7 873 aa12.33□□□□□ -0.44
NSMCE1-201ENST00000361439 P3H2Q8IVL5 708 aa12.33□□□□□ -0.44
NSMCE1-201ENST00000361439 ZNF808Q8N4W9 903 aaPredicted RBP12.33□□□□□ -0.44
NSMCE1-201ENST00000361439 C10orf53Q8N6V4 93 aa12.33□□□□□ -0.44
NSMCE1-201ENST00000361439 TMEM99Q8N816 258 aa12.33□□□□□ -0.44
NSMCE1-201ENST00000361439 OR4K5Q8NGD3 323 aa12.33□□□□□ -0.44
NSMCE1-201ENST00000361439 OR6K3Q8NGY3 331 aa12.33□□□□□ -0.44
NSMCE1-201ENST00000361439 OR52J3Q8NH60 311 aa12.33□□□□□ -0.44
NSMCE1-201ENST00000361439 MOGAT1Q96PD6 335 aa12.33□□□□□ -0.44
NSMCE1-201ENST00000361439 PSD2Q9BQI7 771 aa12.33□□□□□ -0.44
NSMCE1-201ENST00000361439 PIGMQ9H3S5 423 aa12.33□□□□□ -0.44
NSMCE1-201ENST00000361439 DENND2DQ9H6A0 471 aaPredicted RBP12.33□□□□□ -0.44
NSMCE1-201ENST00000361439 C6orf203Q9P0P8 240 aaPredicted RBP12.33□□□□□ -0.44
NSMCE1-201ENST00000361439 Q9UFV3 132 aa12.33□□□□□ -0.44
NSMCE1-201ENST00000361439 A0A1W2PNV4 684 aa12.32□□□□□ -0.44
NSMCE1-201ENST00000361439 ARRDC5A6NEK1 342 aa12.32□□□□□ -0.44
NSMCE1-201ENST00000361439 M0R082 166 aa12.32□□□□□ -0.44
NSMCE1-201ENST00000361439 KPNA4O00629 521 aaPredicted RBP12.32□□□□□ -0.44
NSMCE1-201ENST00000361439 PLPP3O14495 311 aa12.32□□□□□ -0.44
NSMCE1-201ENST00000361439 GNGT2O14610 69 aa12.32□□□□□ -0.44
NSMCE1-201ENST00000361439 LDLRP01130 860 aa12.32□□□□□ -0.44
NSMCE1-201ENST00000361439 IFI30P13284 250 aa12.32□□□□□ -0.44
NSMCE1-201ENST00000361439 FUT1P19526 365 aa12.32□□□□□ -0.44
NSMCE1-201ENST00000361439 FUT4P22083 530 aa12.32□□□□□ -0.44
NSMCE1-201ENST00000361439 FASP25445 335 aa12.32□□□□□ -0.44
NSMCE1-201ENST00000361439 DNAJA1P31689 397 aaKnown RBP12.32□□□□□ -0.44
NSMCE1-201ENST00000361439 ARHGDIAP52565 204 aa12.32□□□□□ -0.44
NSMCE1-201ENST00000361439 LTBQ06643 244 aa12.32□□□□□ -0.44
NSMCE1-201ENST00000361439 PUDPQ08623 228 aa12.32□□□□□ -0.44
NSMCE1-201ENST00000361439 ZP4Q12836 540 aa12.32□□□□□ -0.44
NSMCE1-201ENST00000361439 PMS2P3Q13401 168 aa12.32□□□□□ -0.44
NSMCE1-201ENST00000361439 SLC25A35Q3KQZ1 300 aa12.32□□□□□ -0.44
NSMCE1-201ENST00000361439 TMEM201Q5SNT2 666 aa12.32□□□□□ -0.44
NSMCE1-201ENST00000361439 TBPL2Q6SJ96 375 aa12.32□□□□□ -0.44
NSMCE1-201ENST00000361439 SLC46A3Q7Z3Q1 461 aa12.32□□□□□ -0.44
NSMCE1-201ENST00000361439 PXKQ7Z7A4 578 aa12.32□□□□□ -0.44
NSMCE1-201ENST00000361439 GALNT5Q7Z7M9 940 aa12.32□□□□□ -0.44
NSMCE1-201ENST00000361439 OR4C15Q8NGM1 316 aa12.32□□□□□ -0.44
NSMCE1-201ENST00000361439 LILRB4Q8NHJ6 448 aa12.32□□□□□ -0.44
NSMCE1-201ENST00000361439 PFN4Q8NHR9 129 aa12.32□□□□□ -0.44
NSMCE1-201ENST00000361439 ZNF417Q8TAU3 575 aa12.32□□□□□ -0.44
NSMCE1-201ENST00000361439 ABHD3Q8WU67 409 aa12.32□□□□□ -0.44
NSMCE1-201ENST00000361439 TMEM45BQ96B21 275 aa12.32□□□□□ -0.44
NSMCE1-201ENST00000361439 INTS12Q96CB8 462 aaKnown RBP12.32□□□□□ -0.44
NSMCE1-201ENST00000361439 NRBF2Q96F24 287 aa12.32□□□□□ -0.44
NSMCE1-201ENST00000361439 OXGR1Q96P68 337 aa12.32□□□□□ -0.44
NSMCE1-201ENST00000361439 ZNF587Q96SQ5 575 aaPredicted RBP12.32□□□□□ -0.44
NSMCE1-201ENST00000361439 BDH2Q9BUT1 245 aa12.32□□□□□ -0.44
NSMCE1-201ENST00000361439 C20orf141Q9NUB4 165 aa12.32□□□□□ -0.44
NSMCE1-201ENST00000361439 PARPBPQ9NWS1 579 aa12.32□□□□□ -0.44
NSMCE1-201ENST00000361439 ING1Q9UK53 422 aaPredicted RBP12.32□□□□□ -0.44
NSMCE1-201ENST00000361439 RNF6Q9Y252 685 aa12.32□□□□□ -0.44
NSMCE1-201ENST00000361439 SAMHD1Q9Y3Z3 626 aaKnown RBP12.32□□□□□ -0.44
NSMCE1-201ENST00000361439 MYO7BQ6PIF6 2116 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms