RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 DMWDQ09019 674 aa12.45□□□□□ -0.42
LDB3-202ENST00000361373 ZNF684Q5T5D7 378 aa12.45□□□□□ -0.42
LDB3-202ENST00000361373 SFRP4Q6FHJ7 346 aaPredicted RBP12.45□□□□□ -0.42
LDB3-202ENST00000361373 KLHDC8BQ8IXV7 354 aa12.45□□□□□ -0.42
LDB3-202ENST00000361373 OR4F15Q8NGB8 312 aa12.45□□□□□ -0.42
LDB3-202ENST00000361373 BRIX1Q8TDN6 353 aaKnown RBP12.45□□□□□ -0.42
LDB3-202ENST00000361373 MUL1Q969V5 352 aa12.45□□□□□ -0.42
LDB3-202ENST00000361373 LRFN5Q96NI6 719 aa12.45□□□□□ -0.42
LDB3-202ENST00000361373 SYNPO2LQ9H987 977 aa12.45□□□□□ -0.42
LDB3-202ENST00000361373 NDUFAF4Q9P032 175 aa12.45□□□□□ -0.42
LDB3-202ENST00000361373 ZNF223Q9UK11 482 aaPredicted RBP12.45□□□□□ -0.42
LDB3-202ENST00000361373 PCDHB10Q9UN67 800 aa12.45□□□□□ -0.42
LDB3-202ENST00000361373 NUBP2Q9Y5Y2 271 aa12.45□□□□□ -0.42
LDB3-202ENST00000361373 NUDT21O43809 227 aaKnown RBP12.45□□□□□ -0.42
LDB3-202ENST00000361373 DUSP5Q16690 384 aa12.45□□□□□ -0.42
LDB3-202ENST00000361373 LEXMQ3ZCV2 418 aa12.45□□□□□ -0.42
LDB3-202ENST00000361373 LRRC37A5PQ49AS3 106 aa12.45□□□□□ -0.42
LDB3-202ENST00000361373 SLX4IPQ5VYV7 408 aa12.45□□□□□ -0.42
LDB3-202ENST00000361373 SIMC1Q8NDZ2 872 aa12.45□□□□□ -0.42
LDB3-202ENST00000361373 GOT1L1Q8NHS2 421 aaPredicted RBP12.45□□□□□ -0.42
LDB3-202ENST00000361373 NUDT22Q9BRQ3 303 aa12.45□□□□□ -0.42
LDB3-202ENST00000361373 NLKQ9UBE8 527 aa12.45□□□□□ -0.42
LDB3-202ENST00000361373 GHRLQ9UBU3 117 aa12.45□□□□□ -0.42
LDB3-202ENST00000361373 REV1Q9UBZ9 1251 aa12.45□□□□□ -0.42
LDB3-202ENST00000361373 POMT2Q9UKY4 750 aa12.45□□□□□ -0.42
LDB3-202ENST00000361373 DIMT1Q9UNQ2 313 aaKnown RBP12.45□□□□□ -0.42
LDB3-202ENST00000361373 CNTRLQ7Z7A1 2325 aa12.45□□□□□ -0.42
LDB3-202ENST00000361373 FUOMA2VDF0 154 aa12.45□□□□□ -0.42
LDB3-202ENST00000361373 SLC1A3P43003 542 aa12.45□□□□□ -0.42
LDB3-202ENST00000361373 BIDP55957 195 aa12.45□□□□□ -0.42
LDB3-202ENST00000361373 SDF2Q99470 211 aa12.45□□□□□ -0.42
LDB3-202ENST00000361373 KLK4Q9Y5K2 254 aa12.45□□□□□ -0.42
LDB3-202ENST00000361373 OR6C65A6NJZ3 312 aa12.44□□□□□ -0.42
LDB3-202ENST00000361373 WNT11O96014 354 aa12.44□□□□□ -0.42
LDB3-202ENST00000361373 METAP1DQ6UB28 335 aaPredicted RBP12.44□□□□□ -0.42
LDB3-202ENST00000361373 DLEU7Q6UYE1 221 aa12.44□□□□□ -0.42
LDB3-202ENST00000361373 ZNF836Q6ZNA1 936 aa12.44□□□□□ -0.42
LDB3-202ENST00000361373 SYNPRQ8TBG9 265 aa12.44□□□□□ -0.42
LDB3-202ENST00000361373 SLC19A3Q9BZV2 496 aa12.44□□□□□ -0.42
LDB3-202ENST00000361373 VSX1Q9NZR4 365 aaPredicted RBP12.44□□□□□ -0.42
LDB3-202ENST00000361373 MYOTQ9UBF9 498 aa12.44□□□□□ -0.42
LDB3-202ENST00000361373 PSORS1C1Q9UIG5 152 aa12.44□□□□□ -0.42
LDB3-202ENST00000361373 TMEM265A0A087WTH1 108 aa12.44□□□□□ -0.42
LDB3-202ENST00000361373 NOTOA8MTQ0 251 aa12.44□□□□□ -0.42
LDB3-202ENST00000361373 D6RAR5 112 aa12.44□□□□□ -0.42
LDB3-202ENST00000361373 SURF4O15260 269 aa12.44□□□□□ -0.42
LDB3-202ENST00000361373 RAD1O60671 282 aa12.44□□□□□ -0.42
LDB3-202ENST00000361373 SC5DO75845 299 aa12.44□□□□□ -0.42
LDB3-202ENST00000361373 ITGB8P26012 769 aa12.44□□□□□ -0.42
LDB3-202ENST00000361373 C21orf33P30042 268 aaPredicted RBP12.44□□□□□ -0.42
LDB3-202ENST00000361373 MAN2A2P49641 1150 aa12.44□□□□□ -0.42
LDB3-202ENST00000361373 HTR4Q13639 388 aa12.44□□□□□ -0.42
LDB3-202ENST00000361373 MOB3CQ70IA8 216 aa12.44□□□□□ -0.42
LDB3-202ENST00000361373 FAM217AQ8IXS0 508 aa12.44□□□□□ -0.42
LDB3-202ENST00000361373 TMEM102Q8N9M5 508 aaPredicted RBP12.44□□□□□ -0.42
LDB3-202ENST00000361373 SGCZQ96LD1 299 aa12.44□□□□□ -0.42
LDB3-202ENST00000361373 HYLS1Q96M11 299 aa12.44□□□□□ -0.42
LDB3-202ENST00000361373 BCL2L10Q9HD36 194 aa12.44□□□□□ -0.42
LDB3-202ENST00000361373 YARS2Q9Y2Z4 477 aaKnown RBP12.44□□□□□ -0.42
LDB3-202ENST00000361373 TSPAN9O75954 239 aa12.44□□□□□ -0.42
LDB3-202ENST00000361373 HOXC4P09017 264 aaPredicted RBP12.44□□□□□ -0.42
LDB3-202ENST00000361373 IL7P13232 177 aa12.44□□□□□ -0.42
LDB3-202ENST00000361373 ZNF44P15621 663 aa12.44□□□□□ -0.42
LDB3-202ENST00000361373 CCL11P51671 97 aa12.44□□□□□ -0.42
LDB3-202ENST00000361373 FAM57BQ71RH2 274 aa12.44□□□□□ -0.42
LDB3-202ENST00000361373 DND1Q8IYX4 353 aaKnown RBP12.44□□□□□ -0.42
LDB3-202ENST00000361373 PIGCQ92535 297 aa12.44□□□□□ -0.42
LDB3-202ENST00000361373 CNOT9Q92600 299 aaKnown RBP12.44□□□□□ -0.42
LDB3-202ENST00000361373 THOC3Q96J01 351 aaKnown RBP12.44□□□□□ -0.42
LDB3-202ENST00000361373 DCBLD2Q96PD2 775 aa12.44□□□□□ -0.42
LDB3-202ENST00000361373 P2RX6O15547 441 aa12.44□□□□□ -0.42
LDB3-202ENST00000361373 PRPH2P23942 346 aa12.44□□□□□ -0.42
LDB3-202ENST00000361373 DEFA5Q01523 94 aa12.44□□□□□ -0.42
LDB3-202ENST00000361373 TRA2AQ13595 282 aaKnown RBP eCLIP12.44□□□□□ -0.42
LDB3-202ENST00000361373 RAB31Q13636 194 aa12.44□□□□□ -0.42
LDB3-202ENST00000361373 SLC22A6Q4U2R8 563 aa12.44□□□□□ -0.42
LDB3-202ENST00000361373 ACTBL2Q562R1 376 aa12.44□□□□□ -0.42
LDB3-202ENST00000361373 MARCH3Q86UD3 253 aa12.44□□□□□ -0.42
LDB3-202ENST00000361373 OR2A1Q8NGT9 310 aa12.44□□□□□ -0.42
LDB3-202ENST00000361373 RNF128Q8TEB7 428 aa12.44□□□□□ -0.42
LDB3-202ENST00000361373 SLC23A2Q9UGH3 650 aa12.44□□□□□ -0.42
LDB3-202ENST00000361373 PPT2Q9UMR5 302 aa12.44□□□□□ -0.42
LDB3-202ENST00000361373 RHBDD3Q9Y3P4 386 aa12.44□□□□□ -0.42
LDB3-202ENST00000361373 UBCP0CG48 685 aaKnown RBP12.43□□□□□ -0.42
LDB3-202ENST00000361373 DUSP8Q13202 625 aa12.43□□□□□ -0.42
LDB3-202ENST00000361373 WDR88Q6ZMY6 472 aa12.43□□□□□ -0.42
LDB3-202ENST00000361373 CPEB2Q7Z5Q1 589 aaKnown RBP12.43□□□□□ -0.42
LDB3-202ENST00000361373 IL17RDQ8NFM7 739 aa12.43□□□□□ -0.42
LDB3-202ENST00000361373 ST8SIA1Q92185 356 aa12.43□□□□□ -0.42
LDB3-202ENST00000361373 NICN1Q9BSH3 213 aa12.43□□□□□ -0.42
LDB3-202ENST00000361373 SLC25A18Q9H1K4 315 aa12.43□□□□□ -0.42
LDB3-202ENST00000361373 RASD1Q9Y272 281 aa12.43□□□□□ -0.42
LDB3-202ENST00000361373 PTPRZ1P23471 2315 aaPredicted RBP12.43□□□□□ -0.42
LDB3-202ENST00000361373 PEX11BO96011 259 aa12.43□□□□□ -0.42
LDB3-202ENST00000361373 EIF3IQ13347 325 aaKnown RBP12.43□□□□□ -0.42
LDB3-202ENST00000361373 PLK5Q496M5 336 aa12.43□□□□□ -0.42
LDB3-202ENST00000361373 TRMT12Q53H54 448 aaKnown RBP12.43□□□□□ -0.42
LDB3-202ENST00000361373 PIWIL3Q7Z3Z3 882 aaKnown RBP12.43□□□□□ -0.42
LDB3-202ENST00000361373 ZNF695Q8IW36 515 aa12.43□□□□□ -0.42
LDB3-202ENST00000361373 DTX3Q8N9I9 347 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms