RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 SLITRK4Q8IW52 837 aa20.64■□□□□ 0.89
LDB1-201ENST00000361198 GRPEL2Q8TAA5 225 aa20.64■□□□□ 0.89
LDB1-201ENST00000361198 CREB3L1Q96BA8 519 aa20.64■□□□□ 0.89
LDB1-201ENST00000361198 ZNF501Q96CX3 271 aaPredicted RBP20.64■□□□□ 0.89
LDB1-201ENST00000361198 KLHDC3Q9BQ90 382 aa20.64■□□□□ 0.89
LDB1-201ENST00000361198 ERVMER34-1Q9H9K5 563 aa20.64■□□□□ 0.89
LDB1-201ENST00000361198 FGF21Q9NSA1 209 aa20.64■□□□□ 0.89
LDB1-201ENST00000361198 WDR70Q9NW82 654 aa20.64■□□□□ 0.89
LDB1-201ENST00000361198 ZMIZ1Q9ULJ6 1067 aa20.64■□□□□ 0.89
LDB1-201ENST00000361198 PI4KAP42356 2102 aa20.63■□□□□ 0.89
LDB1-201ENST00000361198 SC5DO75845 299 aa20.63■□□□□ 0.89
LDB1-201ENST00000361198 C1QBP02746 253 aa20.63■□□□□ 0.89
LDB1-201ENST00000361198 ARSBP15848 533 aa20.63■□□□□ 0.89
LDB1-201ENST00000361198 SLC6A1P30531 599 aa20.63■□□□□ 0.89
LDB1-201ENST00000361198 RPL4P36578 427 aaKnown RBP20.63■□□□□ 0.89
LDB1-201ENST00000361198 TNK1Q13470 666 aa20.63■□□□□ 0.89
LDB1-201ENST00000361198 ARHGAP40Q5TG30 622 aa20.63■□□□□ 0.89
LDB1-201ENST00000361198 PRSS42Q7Z5A4 293 aa20.63■□□□□ 0.89
LDB1-201ENST00000361198 ELF4Q99607 663 aaPredicted RBP20.63■□□□□ 0.89
LDB1-201ENST00000361198 CDX2Q99626 313 aaPredicted RBP20.63■□□□□ 0.89
LDB1-201ENST00000361198 RTN4RQ9BZR6 473 aa20.63■□□□□ 0.89
LDB1-201ENST00000361198 ZNF337Q9Y3M9 751 aa20.63■□□□□ 0.89
LDB1-201ENST00000361198 SIT1Q9Y3P8 196 aa20.63■□□□□ 0.89
LDB1-201ENST00000361198 COL6A3P12111 3177 aa20.63■□□□□ 0.89
LDB1-201ENST00000361198 NUP210LQ5VU65 1888 aa20.63■□□□□ 0.89
LDB1-201ENST00000361198 ELOA3DA6NLF2 546 aaPredicted RBP20.62■□□□□ 0.89
LDB1-201ENST00000361198 AGRPO00253 132 aa20.62■□□□□ 0.89
LDB1-201ENST00000361198 ZNF264O43296 627 aa20.62■□□□□ 0.89
LDB1-201ENST00000361198 OR7A10O76100 309 aa20.62■□□□□ 0.89
LDB1-201ENST00000361198 MST1P26927 711 aa20.62■□□□□ 0.89
LDB1-201ENST00000361198 RRAS2P62070 204 aaPredicted RBP20.62■□□□□ 0.89
LDB1-201ENST00000361198 ELOA3BQ3SY89 546 aa20.62■□□□□ 0.89
LDB1-201ENST00000361198 FAAH2Q6GMR7 532 aa20.62■□□□□ 0.89
LDB1-201ENST00000361198 THOC7Q6I9Y2 204 aaKnown RBP20.62■□□□□ 0.89
LDB1-201ENST00000361198 WDR74Q6RFH5 385 aaPredicted RBP20.62■□□□□ 0.89
LDB1-201ENST00000361198 TSSK4Q6SA08 328 aa20.62■□□□□ 0.89
LDB1-201ENST00000361198 PXKQ7Z7A4 578 aa20.62■□□□□ 0.89
LDB1-201ENST00000361198 ATG4DQ86TL0 474 aaPredicted RBP20.62■□□□□ 0.89
LDB1-201ENST00000361198 C9orf40Q8IXQ3 194 aa20.62■□□□□ 0.89
LDB1-201ENST00000361198 ELOA3Q8NG57 546 aa20.62■□□□□ 0.89
LDB1-201ENST00000361198 OR51L1Q8NGJ5 315 aa20.62■□□□□ 0.89
LDB1-201ENST00000361198 TRIM63Q969Q1 353 aa20.62■□□□□ 0.89
LDB1-201ENST00000361198 ZMYND19Q96E35 227 aaPredicted RBP20.62■□□□□ 0.89
LDB1-201ENST00000361198 WACQ9BTA9 647 aa20.62■□□□□ 0.89
LDB1-201ENST00000361198 SLC19A3Q9BZV2 496 aa20.62■□□□□ 0.89
LDB1-201ENST00000361198 A0A1B0GX78 115 aa20.62■□□□□ 0.89
LDB1-201ENST00000361198 AGFG1P52594 562 aaKnown RBP20.62■□□□□ 0.89
LDB1-201ENST00000361198 TAS2R43P59537 309 aa20.62■□□□□ 0.89
LDB1-201ENST00000361198 EBPQ15125 230 aaKnown RBP20.62■□□□□ 0.89
LDB1-201ENST00000361198 ZNF57Q68EA5 555 aaPredicted RBP20.62■□□□□ 0.89
LDB1-201ENST00000361198 SSX6Q7RTT6 188 aa20.62■□□□□ 0.89
LDB1-201ENST00000361198 C4orf36Q96KX1 117 aa20.62■□□□□ 0.89
LDB1-201ENST00000361198 MKL2Q9ULH7 1088 aa20.62■□□□□ 0.89
LDB1-201ENST00000361198 ASCC3Q8N3C0 2202 aaKnown RBP20.62■□□□□ 0.89
LDB1-201ENST00000361198 INMT-MINDY4F8WBC2 141 aa20.61■□□□□ 0.89
LDB1-201ENST00000361198 ICOSLGO75144 302 aa20.61■□□□□ 0.89
LDB1-201ENST00000361198 NPR2P20594 1047 aa20.61■□□□□ 0.89
LDB1-201ENST00000361198 RBMS1P29558 406 aaKnown RBP20.61■□□□□ 0.89
LDB1-201ENST00000361198 HCCSP53701 268 aa20.61■□□□□ 0.89
LDB1-201ENST00000361198 OR12D2P58182 307 aa20.61■□□□□ 0.89
LDB1-201ENST00000361198 BTG1P62324 171 aa20.61■□□□□ 0.89
LDB1-201ENST00000361198 RPS4XP62701 263 aaKnown RBP20.61■□□□□ 0.89
LDB1-201ENST00000361198 SFXN4Q6P4A7 337 aa20.61■□□□□ 0.89
LDB1-201ENST00000361198 ARL9Q6T311 187 aa20.61■□□□□ 0.89
LDB1-201ENST00000361198 DPY19L2P2Q6ZN68 376 aa20.61■□□□□ 0.89
LDB1-201ENST00000361198 PLCZ1Q86YW0 608 aa20.61■□□□□ 0.89
LDB1-201ENST00000361198 RFLNBQ8N5W9 214 aa20.61■□□□□ 0.89
LDB1-201ENST00000361198 OR4M1Q8NGD0 313 aa20.61■□□□□ 0.89
LDB1-201ENST00000361198 ABHD4Q8TB40 342 aa20.61■□□□□ 0.89
LDB1-201ENST00000361198 CCDC74AQ96AQ1 378 aa20.61■□□□□ 0.89
LDB1-201ENST00000361198 VN1R1Q9GZP7 353 aa20.61■□□□□ 0.89
LDB1-201ENST00000361198 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP20.61■□□□□ 0.897e-8■□□□□ 8.3
LDB1-201ENST00000361198 NRIP3Q9NQ35 241 aa20.61■□□□□ 0.89
LDB1-201ENST00000361198 EXOSC3Q9NQT5 275 aaKnown RBP20.61■□□□□ 0.89
LDB1-201ENST00000361198 ING3Q9NXR8 418 aa20.61■□□□□ 0.89
LDB1-201ENST00000361198 A0A0G2JK05 382 aa20.61■□□□□ 0.89
LDB1-201ENST00000361198 J3QLW9 94 aa20.61■□□□□ 0.89
LDB1-201ENST00000361198 IMPA2O14732 288 aa20.61■□□□□ 0.89
LDB1-201ENST00000361198 ZNF19P17023 458 aa20.61■□□□□ 0.89
LDB1-201ENST00000361198 TALDO1P37837 337 aa20.61■□□□□ 0.89
LDB1-201ENST00000361198 CAPZA2P47755 286 aa20.61■□□□□ 0.89
LDB1-201ENST00000361198 E2F1Q01094 437 aa20.61■□□□□ 0.89
LDB1-201ENST00000361198 GPR176Q14439 515 aa20.61■□□□□ 0.89
LDB1-201ENST00000361198 Q7L0L9 218 aa20.61■□□□□ 0.89
LDB1-201ENST00000361198 VASH1Q7L8A9 365 aaPredicted RBP20.61■□□□□ 0.89
LDB1-201ENST00000361198 TMPRSS9Q7Z410 1059 aa20.61■□□□□ 0.89
LDB1-201ENST00000361198 GHDCQ8N2G8 530 aa20.61■□□□□ 0.89
LDB1-201ENST00000361198 OIT3Q8WWZ8 545 aa20.61■□□□□ 0.89
LDB1-201ENST00000361198 NMNAT3Q96T66 252 aa20.61■□□□□ 0.89
LDB1-201ENST00000361198 KLHL1Q9NR64 748 aa20.61■□□□□ 0.89
LDB1-201ENST00000361198 COLQQ9Y215 455 aaPredicted RBP20.61■□□□□ 0.89
LDB1-201ENST00000361198 TFP02787 698 aa20.6■□□□□ 0.89
LDB1-201ENST00000361198 EIF4EP06730 217 aaKnown RBP20.6■□□□□ 0.89
LDB1-201ENST00000361198 PNMTP11086 282 aa20.6■□□□□ 0.89
LDB1-201ENST00000361198 ARRB1P49407 418 aaPredicted RBP20.6■□□□□ 0.89
LDB1-201ENST00000361198 FOXL2P58012 376 aa20.6■□□□□ 0.89
LDB1-201ENST00000361198 PLA1AQ53H76 456 aa20.6■□□□□ 0.89
LDB1-201ENST00000361198 FAM27D1Q5T7N8 215 aa20.6■□□□□ 0.89
LDB1-201ENST00000361198 KMT5CQ86Y97 462 aa20.6■□□□□ 0.89
LDB1-201ENST00000361198 TEX19Q8NA77 164 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms