RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 C3orf49Q96BT1 292 aa7.86□□□□□ -1.15
RFX3-202ENST00000358730 C7orf50Q9BRJ6 194 aaKnown RBP7.86□□□□□ -1.15
RFX3-202ENST00000358730 NKX2-4Q9H2Z4 354 aa7.86□□□□□ -1.15
RFX3-202ENST00000358730 ZCCHC4Q9H5U6 513 aa7.86□□□□□ -1.15
RFX3-202ENST00000358730 RANBP3Q9H6Z4 567 aaPredicted RBP7.86□□□□□ -1.15
RFX3-202ENST00000358730 BEX1Q9HBH7 125 aa7.86□□□□□ -1.15
RFX3-202ENST00000358730 PRTFDC1Q9NRG1 225 aa7.86□□□□□ -1.15
RFX3-202ENST00000358730 C2orf42Q9NWW7 574 aa7.86□□□□□ -1.15
RFX3-202ENST00000358730 MRPL15Q9P015 296 aaKnown RBP7.86□□□□□ -1.15
RFX3-202ENST00000358730 PCDHGA9Q9Y5G4 932 aaKnown RBP7.86□□□□□ -1.15
RFX3-202ENST00000358730 OR5K4A6NMS3 321 aa7.86□□□□□ -1.15
RFX3-202ENST00000358730 BLOC1S5-TXNDC5H3BN57 136 aa7.86□□□□□ -1.15
RFX3-202ENST00000358730 TNFRSF10AO00220 468 aa7.86□□□□□ -1.15
RFX3-202ENST00000358730 ZNF593O00488 134 aaPredicted RBP7.86□□□□□ -1.15
RFX3-202ENST00000358730 ARPC3O15145 178 aa7.86□□□□□ -1.15
RFX3-202ENST00000358730 FOXS1O43638 330 aa7.86□□□□□ -1.15
RFX3-202ENST00000358730 NDUFB5O43674 189 aa7.86□□□□□ -1.15
RFX3-202ENST00000358730 GSTZ1O43708 216 aaPredicted RBP7.86□□□□□ -1.15
RFX3-202ENST00000358730 GPRIN2O60269 458 aa7.86□□□□□ -1.15
RFX3-202ENST00000358730 CTSEP14091 401 aa7.86□□□□□ -1.15
RFX3-202ENST00000358730 GABRG2P18507 467 aa7.86□□□□□ -1.15
RFX3-202ENST00000358730 GPR3P46089 330 aa7.86□□□□□ -1.15
RFX3-202ENST00000358730 RPS4XP62701 263 aaKnown RBP7.86□□□□□ -1.15
RFX3-202ENST00000358730 EIF2B5Q13144 721 aaKnown RBP7.86□□□□□ -1.15
RFX3-202ENST00000358730 GSG1Q2KHT4 349 aa7.86□□□□□ -1.15
RFX3-202ENST00000358730 TMEM184AQ6ZMB5 413 aa7.86□□□□□ -1.15
RFX3-202ENST00000358730 ZNF782Q6ZMW2 699 aaPredicted RBP7.86□□□□□ -1.15
RFX3-202ENST00000358730 BTN2A1Q7KYR7 527 aa7.86□□□□□ -1.15
RFX3-202ENST00000358730 MCATQ8IVS2 390 aaKnown RBP7.86□□□□□ -1.15
RFX3-202ENST00000358730 ZNF687Q8N1G0 1237 aa7.86□□□□□ -1.15
RFX3-202ENST00000358730 METTL27Q8N6F8 245 aaPredicted RBP7.86□□□□□ -1.15
RFX3-202ENST00000358730 MOSPD2Q8NHP6 518 aa7.86□□□□□ -1.15
RFX3-202ENST00000358730 GAS2L1Q99501 681 aaPredicted RBP7.86□□□□□ -1.15
RFX3-202ENST00000358730 GPR174Q9BXC1 333 aa7.86□□□□□ -1.15
RFX3-202ENST00000358730 MFRPQ9BY79 579 aa7.86□□□□□ -1.15
RFX3-202ENST00000358730 C20orf85Q9H1P6 137 aa7.86□□□□□ -1.15
RFX3-202ENST00000358730 UCKL1Q9NWZ5 548 aa7.86□□□□□ -1.15
RFX3-202ENST00000358730 MRPL39Q9NYK5 338 aaKnown RBP7.86□□□□□ -1.15
RFX3-202ENST00000358730 NKIRAS2Q9NYR9 191 aa7.86□□□□□ -1.15
RFX3-202ENST00000358730 RCE1Q9Y256 329 aa7.86□□□□□ -1.15
RFX3-202ENST00000358730 EYSQ5T1H1 3165 aa7.85□□□□□ -1.15
RFX3-202ENST00000358730 ELOA3DA6NLF2 546 aaPredicted RBP7.85□□□□□ -1.15
RFX3-202ENST00000358730 C4orf47A7E2U8 309 aa7.85□□□□□ -1.15
RFX3-202ENST00000358730 PRR32B1ATL7 298 aa7.85□□□□□ -1.15
RFX3-202ENST00000358730 AIPO00170 330 aa7.85□□□□□ -1.15
RFX3-202ENST00000358730 PDCD5O14737 125 aa7.85□□□□□ -1.15
RFX3-202ENST00000358730 PIN1P1O15428 100 aa7.85□□□□□ -1.15
RFX3-202ENST00000358730 SSNA1O43805 119 aa7.85□□□□□ -1.15
RFX3-202ENST00000358730 PRKNO60260 465 aaPredicted RBP7.85□□□□□ -1.15
RFX3-202ENST00000358730 CTNSO60931 367 aa7.85□□□□□ -1.15
RFX3-202ENST00000358730 GLCEO94923 617 aa7.85□□□□□ -1.15
RFX3-202ENST00000358730 CD1AP06126 327 aa7.85□□□□□ -1.15
RFX3-202ENST00000358730 MAGEB1P43366 347 aa7.85□□□□□ -1.15
RFX3-202ENST00000358730 NANOS3P60323 173 aaKnown RBP7.85□□□□□ -1.15
RFX3-202ENST00000358730 PRPS1P60891 318 aa7.85□□□□□ -1.15
RFX3-202ENST00000358730 SKP1P63208 163 aa7.85□□□□□ -1.15
RFX3-202ENST00000358730 MRPS21P82921 87 aaKnown RBP7.85□□□□□ -1.15
RFX3-202ENST00000358730 HSF2Q03933 536 aa7.85□□□□□ -1.15
RFX3-202ENST00000358730 ST3GAL2Q16842 350 aa7.85□□□□□ -1.15
RFX3-202ENST00000358730 ELOA3BQ3SY89 546 aa7.85□□□□□ -1.15
RFX3-202ENST00000358730 JAZF1Q86VZ6 243 aa7.85□□□□□ -1.15
RFX3-202ENST00000358730 ZNF595Q8IYB9 648 aa7.85□□□□□ -1.15
RFX3-202ENST00000358730 ELOA3Q8NG57 546 aa7.85□□□□□ -1.15
RFX3-202ENST00000358730 OR56B4Q8NH76 319 aa7.85□□□□□ -1.15
RFX3-202ENST00000358730 MS4A3Q96HJ5 214 aa7.85□□□□□ -1.15
RFX3-202ENST00000358730 Q96M85 177 aa7.85□□□□□ -1.15
RFX3-202ENST00000358730 GFI1Q99684 422 aa7.85□□□□□ -1.15
RFX3-202ENST00000358730 ALG12Q9BV10 488 aa7.85□□□□□ -1.15
RFX3-202ENST00000358730 NMNAT2Q9BZQ4 307 aa7.85□□□□□ -1.15
RFX3-202ENST00000358730 SPRTNQ9H040 489 aaPredicted RBP7.85□□□□□ -1.15
RFX3-202ENST00000358730 OR10A5Q9H207 317 aa7.85□□□□□ -1.15
RFX3-202ENST00000358730 RXFP3Q9NSD7 469 aa7.85□□□□□ -1.15
RFX3-202ENST00000358730 ZNF346Q9UL40 294 aaKnown RBP7.85□□□□□ -1.15
RFX3-202ENST00000358730 ZNF281Q9Y2X9 895 aa7.85□□□□□ -1.15
RFX3-202ENST00000358730 HS3ST3A1Q9Y663 406 aa7.85□□□□□ -1.15
RFX3-202ENST00000358730 IGKV1D-42A0A075B6H8 117 aa7.85□□□□□ -1.15
RFX3-202ENST00000358730 IFITM5A6NNB3 132 aa7.85□□□□□ -1.15
RFX3-202ENST00000358730 PRAMEF26H0Y7S4 382 aa7.85□□□□□ -1.15
RFX3-202ENST00000358730 CLDN4O14493 209 aa7.85□□□□□ -1.15
RFX3-202ENST00000358730 CTDSPLO15194 276 aa7.85□□□□□ -1.15
RFX3-202ENST00000358730 NOS1APO75052 506 aaPredicted RBP7.85□□□□□ -1.15
RFX3-202ENST00000358730 RPP14O95059 124 aaKnown RBP7.85□□□□□ -1.15
RFX3-202ENST00000358730 ZFPL1O95159 310 aa7.85□□□□□ -1.15
RFX3-202ENST00000358730 IFNA16P05015 189 aa7.85□□□□□ -1.15
RFX3-202ENST00000358730 IGHV4-34P06331 123 aa7.85□□□□□ -1.15
RFX3-202ENST00000358730 OR8G3PP0DMU2 310 aa7.85□□□□□ -1.15
RFX3-202ENST00000358730 DRD1P21728 446 aa7.85□□□□□ -1.15
RFX3-202ENST00000358730 AQP2P41181 271 aa7.85□□□□□ -1.15
RFX3-202ENST00000358730 GRK6P43250 576 aa7.85□□□□□ -1.15
RFX3-202ENST00000358730 CLDN12P56749 244 aa7.85□□□□□ -1.15
RFX3-202ENST00000358730 DLX2Q07687 328 aaPredicted RBP7.85□□□□□ -1.15
RFX3-202ENST00000358730 DYRK1AQ13627 763 aa7.85□□□□□ -1.15
RFX3-202ENST00000358730 HTR4Q13639 388 aa7.85□□□□□ -1.15
RFX3-202ENST00000358730 SHHQ15465 462 aa7.85□□□□□ -1.15
RFX3-202ENST00000358730 PRTGQ2VWP7 1150 aa7.85□□□□□ -1.15
RFX3-202ENST00000358730 ZBTB37Q5TC79 503 aa7.85□□□□□ -1.15
RFX3-202ENST00000358730 FAM220AQ7Z4H9 259 aa7.85□□□□□ -1.15
RFX3-202ENST00000358730 FGD2Q7Z6J4 655 aa7.85□□□□□ -1.15
RFX3-202ENST00000358730 PARGQ86W56 976 aa7.85□□□□□ -1.15
RFX3-202ENST00000358730 ZNF511Q8NB15 262 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms