RNA–Protein interactions for RNA: ENST00000357348.9

RTFDC1-202, Transcript of Protein RTF2 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTFDC1, Length 2,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-202ENST00000357348 NIPAL3Q6P499 406 aa11.62□□□□□ -0.55
RTFDC1-202ENST00000357348 IL20RBQ6UXL0 311 aa11.62□□□□□ -0.55
RTFDC1-202ENST00000357348 CXXC5Q7LFL8 322 aaKnown RBP11.62□□□□□ -0.55
RTFDC1-202ENST00000357348 HMGN2P46Q86SG4 172 aa11.62□□□□□ -0.55
RTFDC1-202ENST00000357348 NKAIN4Q8IVV8 208 aa11.62□□□□□ -0.55
RTFDC1-202ENST00000357348 UXS1Q8NBZ7 420 aa11.62□□□□□ -0.55
RTFDC1-202ENST00000357348 LHFPL5Q8TAF8 219 aa11.62□□□□□ -0.55
RTFDC1-202ENST00000357348 TRMT10AQ8TBZ6 339 aaKnown RBP11.62□□□□□ -0.55
RTFDC1-202ENST00000357348 BRIX1Q8TDN6 353 aaKnown RBP11.62□□□□□ -0.55
RTFDC1-202ENST00000357348 COL26A1Q96A83 441 aa11.62□□□□□ -0.55
RTFDC1-202ENST00000357348 ZNF501Q96CX3 271 aaPredicted RBP11.62□□□□□ -0.55
RTFDC1-202ENST00000357348 LCORQ96JN0 433 aaPredicted RBP11.62□□□□□ -0.55
RTFDC1-202ENST00000357348 YIPF4Q9BSR8 244 aa11.62□□□□□ -0.55
RTFDC1-202ENST00000357348 ALG8Q9BVK2 526 aa11.62□□□□□ -0.55
RTFDC1-202ENST00000357348 DPCDQ9BVM2 203 aaPredicted RBP11.62□□□□□ -0.55
RTFDC1-202ENST00000357348 MFRPQ9BY79 579 aa11.62□□□□□ -0.55
RTFDC1-202ENST00000357348 ACTR6Q9GZN1 396 aa11.62□□□□□ -0.55
RTFDC1-202ENST00000357348 TRIM36Q9NQ86 728 aa11.62□□□□□ -0.55
RTFDC1-202ENST00000357348 CUTCQ9NTM9 273 aa11.62□□□□□ -0.55
RTFDC1-202ENST00000357348 KCMF1Q9P0J7 381 aa11.62□□□□□ -0.55
RTFDC1-202ENST00000357348 H2AFY2Q9P0M6 372 aaPredicted RBP11.62□□□□□ -0.55
RTFDC1-202ENST00000357348 SLC22A7Q9Y694 548 aa11.62□□□□□ -0.55
RTFDC1-202ENST00000357348 KNTC1P50748 2209 aa11.62□□□□□ -0.55
RTFDC1-202ENST00000357348 PTPRZ1P23471 2315 aaPredicted RBP11.62□□□□□ -0.55
RTFDC1-202ENST00000357348 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.62□□□□□ -0.55
RTFDC1-202ENST00000357348 CPSF4LA6NMK7 179 aaKnown RBP11.62□□□□□ -0.55
RTFDC1-202ENST00000357348 CTDSPLO15194 276 aa11.62□□□□□ -0.55
RTFDC1-202ENST00000357348 OR5F1O95221 314 aa11.62□□□□□ -0.55
RTFDC1-202ENST00000357348 NTN1O95631 604 aa11.62□□□□□ -0.55
RTFDC1-202ENST00000357348 HMGN2P05204 90 aaKnown RBP11.62□□□□□ -0.55
RTFDC1-202ENST00000357348 DNASE1P24855 282 aa11.62□□□□□ -0.55
RTFDC1-202ENST00000357348 PRKAR1BP31321 381 aa11.62□□□□□ -0.55
RTFDC1-202ENST00000357348 POU6F2P78424 691 aaPredicted RBP11.62□□□□□ -0.55
RTFDC1-202ENST00000357348 DHODHQ02127 395 aa11.62□□□□□ -0.55
RTFDC1-202ENST00000357348 FGFBP1Q14512 234 aa11.62□□□□□ -0.55
RTFDC1-202ENST00000357348 GRM7Q14831 915 aa11.62□□□□□ -0.55
RTFDC1-202ENST00000357348 MANEAQ5SRI9 462 aa11.62□□□□□ -0.55
RTFDC1-202ENST00000357348 RTL4Q6ZR62 310 aa11.62□□□□□ -0.55
RTFDC1-202ENST00000357348 MEPCEQ7L2J0 689 aaKnown RBP11.62□□□□□ -0.55
RTFDC1-202ENST00000357348 CPOQ8IVL8 374 aa11.62□□□□□ -0.55
RTFDC1-202ENST00000357348 SIAH3Q8IW03 269 aa11.62□□□□□ -0.55
RTFDC1-202ENST00000357348 SLITRK4Q8IW52 837 aa11.62□□□□□ -0.55
RTFDC1-202ENST00000357348 CCDC116Q8IYX3 515 aa11.62□□□□□ -0.55
RTFDC1-202ENST00000357348 CA13Q8N1Q1 262 aa11.62□□□□□ -0.55
RTFDC1-202ENST00000357348 TOMM5Q8N4H5 51 aa11.62□□□□□ -0.55
RTFDC1-202ENST00000357348 OR56A1Q8NGH5 318 aa11.62□□□□□ -0.55
RTFDC1-202ENST00000357348 OR5W2Q8NH69 310 aa11.62□□□□□ -0.55
RTFDC1-202ENST00000357348 MS4A3Q96HJ5 214 aa11.62□□□□□ -0.55
RTFDC1-202ENST00000357348 CACNG6Q9BXT2 260 aa11.62□□□□□ -0.55
RTFDC1-202ENST00000357348 SLC7A5P2Q9GIP4 190 aa11.62□□□□□ -0.55
RTFDC1-202ENST00000357348 CLEC4MQ9H2X3 399 aaPredicted RBP11.62□□□□□ -0.55
RTFDC1-202ENST00000357348 SERTAD3Q9UJW9 196 aa11.62□□□□□ -0.55
RTFDC1-202ENST00000357348 KCNE3Q9Y6H6 103 aa11.62□□□□□ -0.55
RTFDC1-202ENST00000357348 ASPMQ8IZT6 3477 aa11.61□□□□□ -0.55
RTFDC1-202ENST00000357348 ANKRD61A6NGH8 418 aa11.61□□□□□ -0.55
RTFDC1-202ENST00000357348 H3BMH7 237 aa11.61□□□□□ -0.55
RTFDC1-202ENST00000357348 NTN3O00634 580 aaPredicted RBP11.61□□□□□ -0.55
RTFDC1-202ENST00000357348 H2AFB2P0C5Z0 115 aa11.61□□□□□ -0.55
RTFDC1-202ENST00000357348 PDX1P52945 283 aa11.61□□□□□ -0.55
RTFDC1-202ENST00000357348 FOXL2P58012 376 aa11.61□□□□□ -0.55
RTFDC1-202ENST00000357348 OR10A3P58181 314 aa11.61□□□□□ -0.55
RTFDC1-202ENST00000357348 ZP1P60852 638 aa11.61□□□□□ -0.55
RTFDC1-202ENST00000357348 PITPNAQ00169 270 aa11.61□□□□□ -0.55
RTFDC1-202ENST00000357348 TNFRSF17Q02223 184 aa11.61□□□□□ -0.55
RTFDC1-202ENST00000357348 SQSTM1Q13501 440 aa11.61□□□□□ -0.55
RTFDC1-202ENST00000357348 KLF9Q13886 244 aaPredicted RBP11.61□□□□□ -0.55
RTFDC1-202ENST00000357348 LASP1Q14847 261 aaKnown RBP11.61□□□□□ -0.55
RTFDC1-202ENST00000357348 BAIAP2L2Q6UXY1 529 aa11.61□□□□□ -0.55
RTFDC1-202ENST00000357348 RRM2BQ7LG56 351 aa11.61□□□□□ -0.55
RTFDC1-202ENST00000357348 KRT74Q7RTS7 529 aa11.61□□□□□ -0.55
RTFDC1-202ENST00000357348 TMEM99Q8N816 258 aa11.61□□□□□ -0.55
RTFDC1-202ENST00000357348 OR51G2Q8NGK0 314 aa11.61□□□□□ -0.55
RTFDC1-202ENST00000357348 OR56B4Q8NH76 319 aa11.61□□□□□ -0.55
RTFDC1-202ENST00000357348 ABHD4Q8TB40 342 aa11.61□□□□□ -0.55
RTFDC1-202ENST00000357348 KISS1RQ969F8 398 aaPredicted RBP11.61□□□□□ -0.55
RTFDC1-202ENST00000357348 CNRIP1Q96F85 164 aaPredicted RBP11.61□□□□□ -0.55
RTFDC1-202ENST00000357348 ZNF285Q96NJ3 590 aa11.61□□□□□ -0.55
RTFDC1-202ENST00000357348 PRRX2Q99811 253 aa11.61□□□□□ -0.55
RTFDC1-202ENST00000357348 GSX2Q9BZM3 304 aa11.61□□□□□ -0.55
RTFDC1-202ENST00000357348 UBQLN3Q9H347 655 aa11.61□□□□□ -0.55
RTFDC1-202ENST00000357348 CALML5Q9NZT1 146 aa11.61□□□□□ -0.55
RTFDC1-202ENST00000357348 SEMA5BQ9P283 1151 aa11.61□□□□□ -0.55
RTFDC1-202ENST00000357348 KIF25Q9UIL4 384 aa11.61□□□□□ -0.55
RTFDC1-202ENST00000357348 COL5A1P20908 1838 aaPredicted RBP11.61□□□□□ -0.55
RTFDC1-202ENST00000357348 EFCAB7A8K855 629 aa11.6□□□□□ -0.55
RTFDC1-202ENST00000357348 ZNF593O00488 134 aaPredicted RBP11.6□□□□□ -0.55
RTFDC1-202ENST00000357348 ZGLP1P0C6A0 271 aa11.6□□□□□ -0.55
RTFDC1-202ENST00000357348 CCL4P13236 92 aa11.6□□□□□ -0.55
RTFDC1-202ENST00000357348 TBXA2RP21731 343 aa11.6□□□□□ -0.55
RTFDC1-202ENST00000357348 GIFP27352 417 aa11.6□□□□□ -0.55
RTFDC1-202ENST00000357348 ATP6V1E1P36543 226 aa11.6□□□□□ -0.55
RTFDC1-202ENST00000357348 NBL1P41271 181 aa11.6□□□□□ -0.55
RTFDC1-202ENST00000357348 TAS2R43P59537 309 aa11.6□□□□□ -0.55
RTFDC1-202ENST00000357348 PXDC1Q5TGL8 231 aa11.6□□□□□ -0.55
RTFDC1-202ENST00000357348 SLC48A1Q6P1K1 146 aa11.6□□□□□ -0.55
RTFDC1-202ENST00000357348 GDF7Q7Z4P5 450 aa11.6□□□□□ -0.55
RTFDC1-202ENST00000357348 KCTD20Q7Z5Y7 419 aa11.6□□□□□ -0.55
RTFDC1-202ENST00000357348 VRK2Q86Y07 508 aa11.6□□□□□ -0.55
RTFDC1-202ENST00000357348 KMT5CQ86Y97 462 aa11.6□□□□□ -0.55
RTFDC1-202ENST00000357348 NRMQ8IXM6 262 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms