RNA–Protein interactions for RNA: ENST00000356352.6

UPF2-201, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-201ENST00000356352 C1orf220Q5T0J3 134 aa6.02□□□□□ -1.45
UPF2-201ENST00000356352 ATPAF1Q5TC12 328 aaPredicted RBP6.02□□□□□ -1.45
UPF2-201ENST00000356352 CST9LP1Q5W188 147 aa6.02□□□□□ -1.45
UPF2-201ENST00000356352 DESI1Q6ICB0 168 aa6.02□□□□□ -1.45
UPF2-201ENST00000356352 IL20RBQ6UXL0 311 aa6.02□□□□□ -1.45
UPF2-201ENST00000356352 B3GNT8Q7Z7M8 397 aa6.02□□□□□ -1.45
UPF2-201ENST00000356352 ZADH2Q8N4Q0 377 aa6.02□□□□□ -1.45
UPF2-201ENST00000356352 EID2Q8N6I1 236 aa6.02□□□□□ -1.45
UPF2-201ENST00000356352 TOX2Q96NM4 488 aa6.02□□□□□ -1.45
UPF2-201ENST00000356352 MMP28Q9H239 520 aa6.02□□□□□ -1.45
UPF2-201ENST00000356352 TMEM82A0PJX8 343 aa6.01□□□□□ -1.45
UPF2-201ENST00000356352 KDM4EB2RXH2 506 aaPredicted RBP6.01□□□□□ -1.45
UPF2-201ENST00000356352 CRYZL1O95825 349 aa6.01□□□□□ -1.45
UPF2-201ENST00000356352 HLA-DMAP28067 261 aa6.01□□□□□ -1.45
UPF2-201ENST00000356352 OPRL1P41146 370 aa6.01□□□□□ -1.45
UPF2-201ENST00000356352 CHRNEQ04844 493 aa6.01□□□□□ -1.45
UPF2-201ENST00000356352 BAXQ07812 192 aa6.01□□□□□ -1.45
UPF2-201ENST00000356352 SNTB1Q13884 538 aaKnown RBP6.01□□□□□ -1.45
UPF2-201ENST00000356352 ZNF266Q14584 549 aa6.01□□□□□ -1.45
UPF2-201ENST00000356352 LCN10Q6JVE6 187 aa6.01□□□□□ -1.45
UPF2-201ENST00000356352 COX15Q7KZN9 410 aa6.01□□□□□ -1.45
UPF2-201ENST00000356352 SLC22A24Q8N4F4 322 aa6.01□□□□□ -1.45
UPF2-201ENST00000356352 MRPL43Q8N983 215 aaKnown RBP6.01□□□□□ -1.45
UPF2-201ENST00000356352 ZNF480Q8WV37 535 aa6.01□□□□□ -1.45
UPF2-201ENST00000356352 TFAP2CQ92754 450 aa6.01□□□□□ -1.45
UPF2-201ENST00000356352 FGF13Q92913 245 aa6.01□□□□□ -1.45
UPF2-201ENST00000356352 LCORQ96JN0 433 aaPredicted RBP6.01□□□□□ -1.45
UPF2-201ENST00000356352 RNF170Q96K19 258 aa6.01□□□□□ -1.45
UPF2-201ENST00000356352 KCNJ15Q99712 375 aa6.01□□□□□ -1.45
UPF2-201ENST00000356352 PSD2Q9BQI7 771 aa6.01□□□□□ -1.45
UPF2-201ENST00000356352 GON7Q9BXV9 100 aa6.01□□□□□ -1.45
UPF2-201ENST00000356352 CSNK1G1Q9HCP0 422 aa6.01□□□□□ -1.45
UPF2-201ENST00000356352 SSUH2Q9Y2M2 353 aa6.01□□□□□ -1.45
UPF2-201ENST00000356352 ZNF142P52746 1687 aaPredicted RBP6.01□□□□□ -1.45
UPF2-201ENST00000356352 RICTORQ6R327 1708 aa6.01□□□□□ -1.45
UPF2-201ENST00000356352 H0YGG7 62 aa6.01□□□□□ -1.45
UPF2-201ENST00000356352 H0YIV9 168 aa6.01□□□□□ -1.45
UPF2-201ENST00000356352 ZNF593O00488 134 aaPredicted RBP6.01□□□□□ -1.45
UPF2-201ENST00000356352 ENSAO43768 121 aaKnown RBP6.01□□□□□ -1.45
UPF2-201ENST00000356352 C1SP09871 688 aa6.01□□□□□ -1.45
UPF2-201ENST00000356352 CR2P20023 1033 aa6.01□□□□□ -1.45
UPF2-201ENST00000356352 CCR7P32248 378 aa6.01□□□□□ -1.45
UPF2-201ENST00000356352 MTNR1BP49286 362 aa6.01□□□□□ -1.45
UPF2-201ENST00000356352 SUB1P53999 127 aaKnown RBP eCLIP6.01□□□□□ -1.45
UPF2-201ENST00000356352 BATFQ16520 125 aa6.01□□□□□ -1.45
UPF2-201ENST00000356352 TAZQ16635 292 aa6.01□□□□□ -1.45
UPF2-201ENST00000356352 CDKN3Q16667 212 aa6.01□□□□□ -1.45
UPF2-201ENST00000356352 MRPL2Q5T653 305 aaKnown RBP6.01□□□□□ -1.45
UPF2-201ENST00000356352 HBMQ6B0K9 141 aa6.01□□□□□ -1.45
UPF2-201ENST00000356352 OR7E24Q6IFN5 339 aa6.01□□□□□ -1.45
UPF2-201ENST00000356352 DPY19L2P2Q6ZN68 376 aa6.01□□□□□ -1.45
UPF2-201ENST00000356352 CREB3L2Q70SY1 520 aa6.01□□□□□ -1.45
UPF2-201ENST00000356352 CD163Q86VB7 1156 aa6.01□□□□□ -1.45
UPF2-201ENST00000356352 LRRTM3Q86VH5 581 aa6.01□□□□□ -1.45
UPF2-201ENST00000356352 NLRP8Q86W28 1048 aa6.01□□□□□ -1.45
UPF2-201ENST00000356352 CATSPERDQ86XM0 798 aa6.01□□□□□ -1.45
UPF2-201ENST00000356352 SERPINA12Q8IW75 414 aa6.01□□□□□ -1.45
UPF2-201ENST00000356352 VN1R2Q8NFZ6 395 aa6.01□□□□□ -1.45
UPF2-201ENST00000356352 OR8J2Q8NGG1 315 aa6.01□□□□□ -1.45
UPF2-201ENST00000356352 KHSRPQ92945 711 aaKnown RBP eCLIP6.01□□□□□ -1.452e-6■■□□□ 13.7
UPF2-201ENST00000356352 TIMD4Q96H15 378 aa6.01□□□□□ -1.45
UPF2-201ENST00000356352 SORBS1Q9BX66 1292 aaKnown RBP6.01□□□□□ -1.45
UPF2-201ENST00000356352 PDLIM7Q9NR12 457 aa6.01□□□□□ -1.45
UPF2-201ENST00000356352 ZNF355PQ9NSJ1 428 aa6.01□□□□□ -1.45
UPF2-201ENST00000356352 OBP2AQ9NY56 170 aa6.01□□□□□ -1.45
UPF2-201ENST00000356352 MRPS28Q9Y2Q9 187 aaKnown RBP6.01□□□□□ -1.45
UPF2-201ENST00000356352 E9PI62 339 aa6.01□□□□□ -1.45
UPF2-201ENST00000356352 ADH4P08319 380 aa6.01□□□□□ -1.45
UPF2-201ENST00000356352 ZNF728P0DKX0 622 aa6.01□□□□□ -1.45
UPF2-201ENST00000356352 CARD18P57730 90 aa6.01□□□□□ -1.45
UPF2-201ENST00000356352 ZNF252P-AS1Q0IIN9 211 aa6.01□□□□□ -1.45
UPF2-201ENST00000356352 MFAP5Q13361 173 aa6.01□□□□□ -1.45
UPF2-201ENST00000356352 TMEM176BQ3YBM2 270 aaPredicted RBP6.01□□□□□ -1.45
UPF2-201ENST00000356352 Q499Y3 187 aa6.01□□□□□ -1.45
UPF2-201ENST00000356352 LRRC18Q8N456 261 aa6.01□□□□□ -1.45
UPF2-201ENST00000356352 KCNE4Q8WWG9 221 aa6.01□□□□□ -1.45
UPF2-201ENST00000356352 C3orf49Q96BT1 292 aa6.01□□□□□ -1.45
UPF2-201ENST00000356352 FCRL1Q96LA6 429 aa6.01□□□□□ -1.45
UPF2-201ENST00000356352 SMIM3Q9BZL3 60 aa6.01□□□□□ -1.45
UPF2-201ENST00000356352 EGLN1Q9GZT9 426 aa6.01□□□□□ -1.45
UPF2-201ENST00000356352 SEMA6CQ9H3T2 930 aa6.01□□□□□ -1.45
UPF2-201ENST00000356352 FKRPQ9H9S5 495 aa6.01□□□□□ -1.45
UPF2-201ENST00000356352 A4GALTQ9NPC4 353 aa6.01□□□□□ -1.45
UPF2-201ENST00000356352 NECAP2Q9NVZ3 263 aa6.01□□□□□ -1.45
UPF2-201ENST00000356352 VAPAQ9P0L0 249 aa6.01□□□□□ -1.45
UPF2-201ENST00000356352 PEAK1Q9H792 1746 aa6.01□□□□□ -1.45
UPF2-201ENST00000356352 A0A1B0GTW7 788 aa6.01□□□□□ -1.45
UPF2-201ENST00000356352 SYT5O00445 386 aa6.01□□□□□ -1.45
UPF2-201ENST00000356352 FRS3O43559 492 aa6.01□□□□□ -1.45
UPF2-201ENST00000356352 MT-ATP6P00846 226 aa6.01□□□□□ -1.45
UPF2-201ENST00000356352 GIFP27352 417 aa6.01□□□□□ -1.45
UPF2-201ENST00000356352 IMPA1P29218 277 aa6.01□□□□□ -1.45
UPF2-201ENST00000356352 SLC5A2P31639 672 aa6.01□□□□□ -1.45
UPF2-201ENST00000356352 EVI2BP34910 448 aa6.01□□□□□ -1.45
UPF2-201ENST00000356352 FOXA1P55317 472 aa6.01□□□□□ -1.45
UPF2-201ENST00000356352 UBE2KP61086 200 aa6.01□□□□□ -1.45
UPF2-201ENST00000356352 LPAL2Q16609 132 aa6.01□□□□□ -1.45
UPF2-201ENST00000356352 YIF1BQ5BJH7 314 aa6.01□□□□□ -1.45
UPF2-201ENST00000356352 ZMAT1Q5H9K5 638 aa6.01□□□□□ -1.45
UPF2-201ENST00000356352 NXNL2Q5VZ03 156 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms