RNA–Protein interactions for RNA: ENST00000355766.5

VPS13A-201, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-201ENST00000355766 SLC44A2Q8IWA5 706 aaPredicted RBP6.3□□□□□ -1.4
VPS13A-201ENST00000355766 DND1Q8IYX4 353 aaKnown RBP6.3□□□□□ -1.4
VPS13A-201ENST00000355766 RNF113BQ8IZP6 322 aaKnown RBP6.3□□□□□ -1.4
VPS13A-201ENST00000355766 SIRT6Q8N6T7 355 aa6.3□□□□□ -1.4
VPS13A-201ENST00000355766 CLDN22Q8N7P3 220 aa6.3□□□□□ -1.4
VPS13A-201ENST00000355766 LSMEM1Q8N8F7 131 aa6.3□□□□□ -1.4
VPS13A-201ENST00000355766 ZNF441Q8N8Z8 693 aa6.3□□□□□ -1.4
VPS13A-201ENST00000355766 FAM71CQ8NEG0 241 aa6.3□□□□□ -1.4
VPS13A-201ENST00000355766 OR6T1Q8NGN1 323 aa6.3□□□□□ -1.4
VPS13A-201ENST00000355766 STT3BQ8TCJ2 826 aa6.3□□□□□ -1.4
VPS13A-201ENST00000355766 SLC2A12Q8TD20 617 aa6.3□□□□□ -1.4
VPS13A-201ENST00000355766 ADAMTS16Q8TE57 1224 aa6.3□□□□□ -1.4
VPS13A-201ENST00000355766 TRUB1Q8WWH5 349 aaKnown RBP6.3□□□□□ -1.4
VPS13A-201ENST00000355766 CYGBQ8WWM9 190 aa6.3□□□□□ -1.4
VPS13A-201ENST00000355766 METTL21AQ8WXB1 218 aa6.3□□□□□ -1.4
VPS13A-201ENST00000355766 ACOT11Q8WXI4 607 aaPredicted RBP6.3□□□□□ -1.4
VPS13A-201ENST00000355766 HDAC2Q92769 488 aaKnown RBP6.3□□□□□ -1.4
VPS13A-201ENST00000355766 SLC38A4Q969I6 547 aa6.3□□□□□ -1.4
VPS13A-201ENST00000355766 ARSGQ96EG1 525 aa6.3□□□□□ -1.4
VPS13A-201ENST00000355766 NEIL1Q96FI4 390 aaPredicted RBP6.3□□□□□ -1.4
VPS13A-201ENST00000355766 MPP4Q96JB8 637 aa6.3□□□□□ -1.4
VPS13A-201ENST00000355766 CNBD2Q96M20 576 aa6.3□□□□□ -1.4
VPS13A-201ENST00000355766 MBOAT4Q96T53 435 aa6.3□□□□□ -1.4
VPS13A-201ENST00000355766 SMR3AQ99954 134 aa6.3□□□□□ -1.4
VPS13A-201ENST00000355766 VKORC1Q9BQB6 163 aa6.3□□□□□ -1.4
VPS13A-201ENST00000355766 MESP1Q9BRJ9 268 aa6.3□□□□□ -1.4
VPS13A-201ENST00000355766 CRB3Q9BUF7 120 aa6.3□□□□□ -1.4
VPS13A-201ENST00000355766 FNDC11Q9BVV2 318 aa6.3□□□□□ -1.4
VPS13A-201ENST00000355766 MRPS26Q9BYN8 205 aaKnown RBP6.3□□□□□ -1.4
VPS13A-201ENST00000355766 PRRG3Q9BZD7 231 aa6.3□□□□□ -1.4
VPS13A-201ENST00000355766 SLC19A3Q9BZV2 496 aa6.3□□□□□ -1.4
VPS13A-201ENST00000355766 C12orf10Q9HB07 376 aa6.3□□□□□ -1.4
VPS13A-201ENST00000355766 CCNB1IP1Q9NPC3 277 aa6.3□□□□□ -1.4
VPS13A-201ENST00000355766 NECTIN3Q9NQS3 549 aa6.3□□□□□ -1.4
VPS13A-201ENST00000355766 UBQLN4Q9NRR5 601 aa6.3□□□□□ -1.4
VPS13A-201ENST00000355766 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.3□□□□□ -1.4
VPS13A-201ENST00000355766 FAM118AQ9NWS6 357 aa6.3□□□□□ -1.4
VPS13A-201ENST00000355766 VNN3Q9NY84 501 aa6.3□□□□□ -1.4
VPS13A-201ENST00000355766 COQ3Q9NZJ6 369 aa6.3□□□□□ -1.4
VPS13A-201ENST00000355766 KCNN3Q9UGI6 736 aa6.3□□□□□ -1.4
VPS13A-201ENST00000355766 CBLCQ9ULV8 474 aa6.3□□□□□ -1.4
VPS13A-201ENST00000355766 A4GNTQ9UNA3 340 aa6.3□□□□□ -1.4
VPS13A-201ENST00000355766 ERVK-19Q9WJR5 959 aa6.3□□□□□ -1.4
VPS13A-201ENST00000355766 TMEM5Q9Y2B1 443 aa6.3□□□□□ -1.4
VPS13A-201ENST00000355766 ZGRF1Q86YA3 2104 aa6.29□□□□□ -1.4
VPS13A-201ENST00000355766 VPS13CQ709C8 3753 aa6.29□□□□□ -1.4
VPS13A-201ENST00000355766 A0A087WXM4 84 aa6.29□□□□□ -1.4
VPS13A-201ENST00000355766 NSG1A0A0A6YYJ2 146 aa6.29□□□□□ -1.4
VPS13A-201ENST00000355766 LOC100130705A0A1B0GUX0 176 aa6.29□□□□□ -1.4
VPS13A-201ENST00000355766 SMIM31A0A1B0GVY4 71 aa6.29□□□□□ -1.4
VPS13A-201ENST00000355766 SH3PXD2BA1X283 911 aa6.29□□□□□ -1.4
VPS13A-201ENST00000355766 TRAPPC13A5PLN9 417 aa6.29□□□□□ -1.4
VPS13A-201ENST00000355766 IDSB3KWA1 339 aa6.29□□□□□ -1.4
VPS13A-201ENST00000355766 H3BNH8 94 aa6.29□□□□□ -1.4
VPS13A-201ENST00000355766 ADAM10O14672 748 aa6.29□□□□□ -1.4
VPS13A-201ENST00000355766 FCMRO60667 390 aa6.29□□□□□ -1.4
VPS13A-201ENST00000355766 CDC123O75794 336 aaPredicted RBP6.29□□□□□ -1.4
VPS13A-201ENST00000355766 WDPCPO95876 746 aa6.29□□□□□ -1.4
VPS13A-201ENST00000355766 EPPINO95925 133 aa6.29□□□□□ -1.4
VPS13A-201ENST00000355766 SERPINA7P05543 415 aa6.29□□□□□ -1.4
VPS13A-201ENST00000355766 RPSAP08865 295 aaKnown RBP6.29□□□□□ -1.4
VPS13A-201ENST00000355766 COX6A1P12074 109 aa6.29□□□□□ -1.4
VPS13A-201ENST00000355766 ABOP16442 354 aa6.29□□□□□ -1.4
VPS13A-201ENST00000355766 TNNI3P19429 210 aa6.29□□□□□ -1.4
VPS13A-201ENST00000355766 FPR3P25089 353 aa6.29□□□□□ -1.4
VPS13A-201ENST00000355766 OR1D4P47884 311 aa6.29□□□□□ -1.4
VPS13A-201ENST00000355766 OR1E2P47887 323 aa6.29□□□□□ -1.4
VPS13A-201ENST00000355766 TMED10P49755 219 aaKnown RBP6.29□□□□□ -1.4
VPS13A-201ENST00000355766 MEOX1P50221 254 aa6.29□□□□□ -1.4
VPS13A-201ENST00000355766 DAPP51397 102 aa6.29□□□□□ -1.4
VPS13A-201ENST00000355766 GPR143P51810 404 aa6.29□□□□□ -1.4
VPS13A-201ENST00000355766 ATP12AP54707 1039 aa6.29□□□□□ -1.4
VPS13A-201ENST00000355766 NR1H2P55055 460 aa6.29□□□□□ -1.4
VPS13A-201ENST00000355766 CASP9P55211 416 aa6.29□□□□□ -1.4
VPS13A-201ENST00000355766 SH3BGRP55822 239 aaPredicted RBP6.29□□□□□ -1.4
VPS13A-201ENST00000355766 TAS2R41P59536 307 aa6.29□□□□□ -1.4
VPS13A-201ENST00000355766 ADAM8P78325 824 aa6.29□□□□□ -1.4
VPS13A-201ENST00000355766 BTG2P78543 158 aa6.29□□□□□ -1.4
VPS13A-201ENST00000355766 TFF3Q07654 80 aa6.29□□□□□ -1.4
VPS13A-201ENST00000355766 DBPQ10586 325 aaPredicted RBP6.29□□□□□ -1.4
VPS13A-201ENST00000355766 NPRL3Q12980 569 aa6.29□□□□□ -1.4
VPS13A-201ENST00000355766 EFR3AQ14156 821 aa6.29□□□□□ -1.4
VPS13A-201ENST00000355766 FGFBP1Q14512 234 aa6.29□□□□□ -1.4
VPS13A-201ENST00000355766 EXOSC7Q15024 291 aaKnown RBP6.29□□□□□ -1.4
VPS13A-201ENST00000355766 EBPQ15125 230 aaKnown RBP6.29□□□□□ -1.4
VPS13A-201ENST00000355766 SYT16Q17RD7 645 aa6.29□□□□□ -1.4
VPS13A-201ENST00000355766 EXOC3L2Q2M3D2 409 aa6.29□□□□□ -1.4
VPS13A-201ENST00000355766 TMEM44Q2T9K0 475 aa6.29□□□□□ -1.4
VPS13A-201ENST00000355766 ENTPD8Q5MY95 495 aa6.29□□□□□ -1.4
VPS13A-201ENST00000355766 C1orf94Q6P1W5 598 aa6.29□□□□□ -1.4
VPS13A-201ENST00000355766 TTC33Q6PID6 262 aaPredicted RBP6.29□□□□□ -1.4
VPS13A-201ENST00000355766 TBPL2Q6SJ96 375 aa6.29□□□□□ -1.4
VPS13A-201ENST00000355766 TMEM205Q6UW68 189 aa6.29□□□□□ -1.4
VPS13A-201ENST00000355766 NPSR1Q6W5P4 371 aa6.29□□□□□ -1.4
VPS13A-201ENST00000355766 DEF8Q6ZN54 512 aa6.29□□□□□ -1.4
VPS13A-201ENST00000355766 SLC29A4Q7RTT9 530 aa6.29□□□□□ -1.4
VPS13A-201ENST00000355766 TMEM179BQ7Z7N9 219 aa6.29□□□□□ -1.4
VPS13A-201ENST00000355766 B3GNT7Q8NFL0 401 aa6.29□□□□□ -1.4
VPS13A-201ENST00000355766 OR5L2Q8NGL0 311 aa6.29□□□□□ -1.4
VPS13A-201ENST00000355766 SLC7A13Q8TCU3 470 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms