RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 TPST2O60704 377 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 ZFAND5O76080 213 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 NOL4O94818 638 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 TMEM50AO95807 157 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 MBP02144 154 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 ERCC1P07992 297 aaPredicted RBP1.32□□□□□ -2.2
BRCA1-202ENST00000354071 DUX4L2P0CJ85 424 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 DUX4L3P0CJ86 424 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 DUX4L4P0CJ87 422 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 DUX4L5P0CJ88 424 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 DUX4L6P0CJ89 424 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 DUX4L7P0CJ90 424 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 PPIAL4FP0DN26 164 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 TNNI1P19237 187 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 FGF9P31371 208 aaPredicted RBP1.32□□□□□ -2.2
BRCA1-202ENST00000354071 ETV5P41161 510 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 NBL1P41271 181 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 OR1D4P47884 311 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 UPP1Q16831 310 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 MUC21Q5SSG8 566 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 OTUD3Q5T2D3 398 aaPredicted RBP1.32□□□□□ -2.2
BRCA1-202ENST00000354071 DUX4L9Q6RFH8 374 aaPredicted RBP1.32□□□□□ -2.2
BRCA1-202ENST00000354071 BZW1Q7L1Q6 419 aaKnown RBP1.32□□□□□ -2.2
BRCA1-202ENST00000354071 ZNF100Q8IYN0 542 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 PQLC3Q8N755 202 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 TPRX1Q8N7U7 411 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 ZSCAN4Q8NAM6 433 aaPredicted RBP1.32□□□□□ -2.2
BRCA1-202ENST00000354071 HSD17B11Q8NBQ5 300 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 B3GNT7Q8NFL0 401 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 OR4D10Q8NGI6 311 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 OR52E5Q8NH55 327 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 OR56B4Q8NH76 319 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 PLPPR1Q8TBJ4 325 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 ZNF564Q8TBZ8 553 aaPredicted RBP1.32□□□□□ -2.2
BRCA1-202ENST00000354071 MARCH1Q8TCQ1 289 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 PSMG2Q969U7 264 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 CERS2Q96G23 380 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 MS4A4EQ96PG1 132 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 ATP5SQ99766 215 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 TMEM204Q9BSN7 226 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 CHID1Q9BWS9 393 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 UPF3BQ9BZI7 483 aaKnown RBP1.32□□□□□ -2.2
BRCA1-202ENST00000354071 CHRNA10Q9GZZ6 450 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 MMP28Q9H239 520 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 CCNB1IP1Q9NPC3 277 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 PRSS16Q9NQE7 514 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 MIEF1Q9NQG6 463 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 C6orf203Q9P0P8 240 aaPredicted RBP1.32□□□□□ -2.2
BRCA1-202ENST00000354071 DUX4Q9UBX2 424 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 CYTH4Q9UIA0 394 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 RASD1Q9Y272 281 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 STARD10Q9Y365 291 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 DHRS7Q9Y394 339 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 PPIAL4AQ9Y536 164 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 ZANQ9Y493 2812 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 A0A087WYN8 130 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 A0A1B0GUV1 79 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 GOLGA6L4A6NEF3 574 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 TRABD2BA6NFA1 517 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 C9JVG2 144 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 RAB29O14966 203 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 SCAMP2O15127 329 aaKnown RBP1.32□□□□□ -2.2
BRCA1-202ENST00000354071 GPX5O75715 221 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 OXSR1O95747 527 aaPredicted RBP1.32□□□□□ -2.2
BRCA1-202ENST00000354071 OXTP01178 125 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 CFC1BP0CG36 223 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 CFC1P0CG37 223 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 MYOGP15173 224 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 ZNF43P17038 809 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 HOXD10P28358 340 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 GTF2E2P29084 291 aaKnown RBP1.32□□□□□ -2.2
BRCA1-202ENST00000354071 BMI1P35226 326 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 EPS15P42566 896 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 GANABQ14697 944 aaKnown RBP1.32□□□□□ -2.2
BRCA1-202ENST00000354071 WDR43Q15061 677 aaKnown RBP eCLIP1.32□□□□□ -2.2
BRCA1-202ENST00000354071 UFSP1Q6NVU6 142 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 TTC23LQ6PF05 361 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 SPSB3Q6PJ21 355 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 SCARA5Q6ZMJ2 495 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 TIPARPQ7Z3E1 657 aaKnown RBP1.32□□□□□ -2.2
BRCA1-202ENST00000354071 MTERF4Q7Z6M4 381 aaKnown RBP1.32□□□□□ -2.2
BRCA1-202ENST00000354071 VRK2Q86Y07 508 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 MARVELD2Q8N4S9 558 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 SPPL2AQ8TCT8 520 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 TRUB1Q8WWH5 349 aaKnown RBP1.32□□□□□ -2.2
BRCA1-202ENST00000354071 MCUR1Q96AQ8 359 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 SLC25A38Q96DW6 304 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 ZNF670Q9BS34 389 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 CABLES2Q9BTV7 478 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 NAA50Q9GZZ1 169 aaKnown RBP1.32□□□□□ -2.2
BRCA1-202ENST00000354071 RBKSQ9H477 322 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 CLSTN2Q9H4D0 955 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 FANCEQ9HB96 536 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 FGF20Q9NP95 211 aaPredicted RBP1.32□□□□□ -2.2
BRCA1-202ENST00000354071 NT5MQ9NPB1 228 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 AGPAT4Q9NRZ5 378 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 ERVW-1Q9UQF0 538 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 COMMD3-BMI1R4GMX3 469 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 ERBINQ96RT1 1412 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 CLOCKO15516 846 aa1.32□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms