RNA–Protein interactions for RNA: ENST00000351288.10

SMPD4-201, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,661 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-201ENST00000351288 FLRT3Q9NZU0 649 aa9.53□□□□□ -0.88
SMPD4-201ENST00000351288 TMEM5Q9Y2B1 443 aa9.53□□□□□ -0.88
SMPD4-201ENST00000351288 EXOSC1Q9Y3B2 195 aaKnown RBP9.53□□□□□ -0.88
SMPD4-201ENST00000351288 TMEM184BQ9Y519 407 aaPredicted RBP9.53□□□□□ -0.88
SMPD4-201ENST00000351288 SYT5O00445 386 aa9.53□□□□□ -0.88
SMPD4-201ENST00000351288 SMAD9O15198 467 aaKnown RBP9.53□□□□□ -0.88
SMPD4-201ENST00000351288 EIF4EP06730 217 aaKnown RBP9.53□□□□□ -0.88
SMPD4-201ENST00000351288 KLK3P07288 261 aaPredicted RBP9.53□□□□□ -0.88
SMPD4-201ENST00000351288 CD3GP09693 182 aa9.53□□□□□ -0.88
SMPD4-201ENST00000351288 PTHLHP12272 177 aa9.53□□□□□ -0.88
SMPD4-201ENST00000351288 PRKCAP17252 672 aa9.53□□□□□ -0.88
SMPD4-201ENST00000351288 POU3F3P20264 500 aaPredicted RBP9.53□□□□□ -0.88
SMPD4-201ENST00000351288 ENDOUP21128 410 aaKnown RBP9.53□□□□□ -0.88
SMPD4-201ENST00000351288 ANGPT1Q15389 498 aa9.53□□□□□ -0.88
SMPD4-201ENST00000351288 ALG10Q5BKT4 473 aa9.53□□□□□ -0.88
SMPD4-201ENST00000351288 DMRTC1Q5HYR2 192 aa9.53□□□□□ -0.88
SMPD4-201ENST00000351288 XKRXQ6PP77 449 aa9.53□□□□□ -0.88
SMPD4-201ENST00000351288 PRSS45Q7RTY3 260 aa9.53□□□□□ -0.88
SMPD4-201ENST00000351288 AP3S1Q92572 193 aa9.53□□□□□ -0.88
SMPD4-201ENST00000351288 UPRTQ96BW1 309 aa9.53□□□□□ -0.88
SMPD4-201ENST00000351288 FGF20Q9NP95 211 aaPredicted RBP9.53□□□□□ -0.88
SMPD4-201ENST00000351288 UBQLN4Q9NRR5 601 aa9.53□□□□□ -0.88
SMPD4-201ENST00000351288 TEX51A0A1B0GUA7 166 aa9.52□□□□□ -0.88
SMPD4-201ENST00000351288 FOXS1O43638 330 aa9.52□□□□□ -0.88
SMPD4-201ENST00000351288 AHSA1O95433 338 aa9.52□□□□□ -0.88
SMPD4-201ENST00000351288 GPANK1O95872 356 aa9.52□□□□□ -0.88
SMPD4-201ENST00000351288 OR8G3PP0DMU2 310 aa9.52□□□□□ -0.88
SMPD4-201ENST00000351288 HIST1H1CP16403 213 aaKnown RBP9.52□□□□□ -0.88
SMPD4-201ENST00000351288 OTX2P32243 289 aa9.52□□□□□ -0.88
SMPD4-201ENST00000351288 GUCA1AP43080 201 aaPredicted RBP9.52□□□□□ -0.88
SMPD4-201ENST00000351288 GBX2P52951 348 aaPredicted RBP9.52□□□□□ -0.88
SMPD4-201ENST00000351288 CLDN6P56747 220 aa9.52□□□□□ -0.88
SMPD4-201ENST00000351288 EEF1A1P68104 462 aaKnown RBP9.52□□□□□ -0.88
SMPD4-201ENST00000351288 SERTAD2Q14140 314 aa9.52□□□□□ -0.88
SMPD4-201ENST00000351288 MELKQ14680 651 aa9.52□□□□□ -0.88
SMPD4-201ENST00000351288 TAF13Q15543 124 aa9.52□□□□□ -0.88
SMPD4-201ENST00000351288 LCN1P1Q5VSP4 162 aa9.52□□□□□ -0.88
SMPD4-201ENST00000351288 CD300LDQ6UXZ3 194 aa9.52□□□□□ -0.88
SMPD4-201ENST00000351288 GDPGP1Q6ZNW5 385 aa9.52□□□□□ -0.88
SMPD4-201ENST00000351288 FGD2Q7Z6J4 655 aa9.52□□□□□ -0.88
SMPD4-201ENST00000351288 TIGD4Q8IY51 512 aa9.52□□□□□ -0.88
SMPD4-201ENST00000351288 OR5W2Q8NH69 310 aa9.52□□□□□ -0.88
SMPD4-201ENST00000351288 NT5CQ8TCD5 201 aa9.52□□□□□ -0.88
SMPD4-201ENST00000351288 STT3BQ8TCJ2 826 aa9.52□□□□□ -0.88
SMPD4-201ENST00000351288 ZPLD1Q8TCW7 415 aa9.52□□□□□ -0.88
SMPD4-201ENST00000351288 ZNF649Q9BS31 505 aa9.52□□□□□ -0.88
SMPD4-201ENST00000351288 RNF121Q9H920 327 aa9.52□□□□□ -0.88
SMPD4-201ENST00000351288 TMA7Q9Y2S6 64 aaKnown RBP9.52□□□□□ -0.88
SMPD4-201ENST00000351288 ALG5Q9Y673 324 aa9.52□□□□□ -0.88
SMPD4-201ENST00000351288 MUC22E2RYF6 1773 aaPredicted RBP9.52□□□□□ -0.89
SMPD4-201ENST00000351288 TRBV11-1A0A0K0K1C0 115 aa9.52□□□□□ -0.89
SMPD4-201ENST00000351288 TMEM72A0PK05 275 aa9.52□□□□□ -0.89
SMPD4-201ENST00000351288 IRGMA1A4Y4 181 aa9.52□□□□□ -0.89
SMPD4-201ENST00000351288 ACOD1A6NK06 481 aa9.52□□□□□ -0.89
SMPD4-201ENST00000351288 SELENOFO60613 162 aa9.52□□□□□ -0.89
SMPD4-201ENST00000351288 ICOSLGO75144 302 aa9.52□□□□□ -0.89
SMPD4-201ENST00000351288 IGKV1D-16P01601 117 aa9.52□□□□□ -0.89
SMPD4-201ENST00000351288 SNRPBP14678 240 aaKnown RBP9.52□□□□□ -0.89
SMPD4-201ENST00000351288 HTR1FP30939 366 aa9.52□□□□□ -0.89
SMPD4-201ENST00000351288 MAP2K3P46734 347 aa9.52□□□□□ -0.89
SMPD4-201ENST00000351288 DUSP8Q13202 625 aa9.52□□□□□ -0.89
SMPD4-201ENST00000351288 KRR1Q13601 381 aaKnown RBP9.52□□□□□ -0.89
SMPD4-201ENST00000351288 NIPAL3Q6P499 406 aa9.52□□□□□ -0.89
SMPD4-201ENST00000351288 SPEM1Q8N4L4 309 aa9.52□□□□□ -0.89
SMPD4-201ENST00000351288 OR4M1Q8NGD0 313 aa9.52□□□□□ -0.89
SMPD4-201ENST00000351288 SLC2A12Q8TD20 617 aa9.52□□□□□ -0.89
SMPD4-201ENST00000351288 TEAD3Q99594 435 aa9.52□□□□□ -0.89
SMPD4-201ENST00000351288 KLHDC3Q9BQ90 382 aa9.52□□□□□ -0.89
SMPD4-201ENST00000351288 SYT4Q9H2B2 425 aa9.52□□□□□ -0.89
SMPD4-201ENST00000351288 PCDHGB2Q9Y5G2 931 aa9.52□□□□□ -0.89
SMPD4-201ENST00000351288 NOX1Q9Y5S8 564 aa9.52□□□□□ -0.89
SMPD4-201ENST00000351288 FAM47E-STBD1D6RA91 191 aa9.52□□□□□ -0.89
SMPD4-201ENST00000351288 ZNF264O43296 627 aa9.52□□□□□ -0.89
SMPD4-201ENST00000351288 BRINP1O60477 761 aa9.52□□□□□ -0.89
SMPD4-201ENST00000351288 NSA2O95478 260 aaKnown RBP9.52□□□□□ -0.89
SMPD4-201ENST00000351288 AK1P00568 194 aa9.52□□□□□ -0.89
SMPD4-201ENST00000351288 MAS1P04201 325 aa9.52□□□□□ -0.89
SMPD4-201ENST00000351288 GNALP38405 381 aa9.52□□□□□ -0.89
SMPD4-201ENST00000351288 GPR143P51810 404 aa9.52□□□□□ -0.89
SMPD4-201ENST00000351288 C1QL3Q5VWW1 255 aa9.52□□□□□ -0.89
SMPD4-201ENST00000351288 MZT2AQ6P582 158 aa9.52□□□□□ -0.89
SMPD4-201ENST00000351288 PAPD4Q6PIY7 484 aaKnown RBP9.52□□□□□ -0.89
SMPD4-201ENST00000351288 LRFN4Q6PJG9 635 aa9.52□□□□□ -0.89
SMPD4-201ENST00000351288 OR5H6Q8NGV6 325 aa9.52□□□□□ -0.89
SMPD4-201ENST00000351288 MOSPD2Q8NHP6 518 aa9.52□□□□□ -0.89
SMPD4-201ENST00000351288 FLVCR1-AS1Q8TAF5 88 aa9.52□□□□□ -0.89
SMPD4-201ENST00000351288 TIMP4Q99727 224 aa9.52□□□□□ -0.89
SMPD4-201ENST00000351288 CDCP1Q9H5V8 836 aa9.52□□□□□ -0.89
SMPD4-201ENST00000351288 APMAPQ9HDC9 416 aa9.52□□□□□ -0.89
SMPD4-201ENST00000351288 ASB6Q9NWX5 421 aa9.52□□□□□ -0.89
SMPD4-201ENST00000351288 ALKBH4Q9NXW9 302 aa9.52□□□□□ -0.89
SMPD4-201ENST00000351288 MED11Q9P086 117 aa9.52□□□□□ -0.89
SMPD4-201ENST00000351288 LAMP5Q9UJQ1 280 aa9.52□□□□□ -0.89
SMPD4-201ENST00000351288 PCNX3Q9H6A9 2034 aa9.52□□□□□ -0.89
SMPD4-201ENST00000351288 TICRRQ7Z2Z1 1910 aa9.51□□□□□ -0.89
SMPD4-201ENST00000351288 IGHV1OR21-1A0A087WYE8 117 aa9.51□□□□□ -0.89
SMPD4-201ENST00000351288 SLC22A31A6NKX4 558 aa9.51□□□□□ -0.89
SMPD4-201ENST00000351288 ADH7P40394 386 aa9.51□□□□□ -0.89
SMPD4-201ENST00000351288 HES5Q5TA89 166 aa9.51□□□□□ -0.89
SMPD4-201ENST00000351288 BICRALQ6AI39 1079 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms